RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CHD2O14647 1828 aaKnown RBP13.28□□□□□ -0.28
DDB1-212ENST00000538470 HSPA1LP34931 641 aa13.28□□□□□ -0.28
DDB1-212ENST00000538470 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
DDB1-212ENST00000538470 PLEKHG1Q9ULL1 1385 aa13.27□□□□□ -0.29
DDB1-212ENST00000538470 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
DDB1-212ENST00000538470 SOCS7O14512 581 aa13.25□□□□□ -0.29
DDB1-212ENST00000538470 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
DDB1-212ENST00000538470 KCNA6P17658 529 aa13.24□□□□□ -0.29
DDB1-212ENST00000538470 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
DDB1-212ENST00000538470 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
DDB1-212ENST00000538470 NUP155O75694 1391 aa13.22□□□□□ -0.29
DDB1-212ENST00000538470 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
DDB1-212ENST00000538470 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
DDB1-212ENST00000538470 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.21□□□□□ -0.29
DDB1-212ENST00000538470 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
DDB1-212ENST00000538470 TRPM2O94759 1503 aa13.2□□□□□ -0.3
DDB1-212ENST00000538470 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
DDB1-212ENST00000538470 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
DDB1-212ENST00000538470 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
DDB1-212ENST00000538470 MSH6P52701 1360 aa13.19□□□□□ -0.3
DDB1-212ENST00000538470 KIF1BO60333 1816 aa13.18□□□□□ -0.3
DDB1-212ENST00000538470 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
DDB1-212ENST00000538470 BCANQ96GW7 911 aa13.18□□□□□ -0.3
DDB1-212ENST00000538470 ADAMTS13Q76LX8 1427 aa13.18□□□□□ -0.3
DDB1-212ENST00000538470 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
DDB1-212ENST00000538470 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
DDB1-212ENST00000538470 ITGAEP38570 1179 aa13.17□□□□□ -0.3
DDB1-212ENST00000538470 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
DDB1-212ENST00000538470 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
DDB1-212ENST00000538470 NAIPQ13075 1403 aa13.16□□□□□ -0.3
DDB1-212ENST00000538470 CHGAP10645 457 aaKnown RBP13.16□□□□□ -0.3
DDB1-212ENST00000538470 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
DDB1-212ENST00000538470 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
DDB1-212ENST00000538470 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
DDB1-212ENST00000538470 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.14□□□□□ -0.31
DDB1-212ENST00000538470 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
DDB1-212ENST00000538470 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
DDB1-212ENST00000538470 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
DDB1-212ENST00000538470 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
DDB1-212ENST00000538470 DCCP43146 1447 aa13.11□□□□□ -0.31
DDB1-212ENST00000538470 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
DDB1-212ENST00000538470 SENP3Q9H4L4 574 aaPredicted RBP13.1□□□□□ -0.31
DDB1-212ENST00000538470 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
DDB1-212ENST00000538470 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
DDB1-212ENST00000538470 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
DDB1-212ENST00000538470 PPLO60437 1756 aa13.08□□□□□ -0.32
DDB1-212ENST00000538470 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
DDB1-212ENST00000538470 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
DDB1-212ENST00000538470 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
DDB1-212ENST00000538470 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
DDB1-212ENST00000538470 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
DDB1-212ENST00000538470 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
DDB1-212ENST00000538470 JCADQ9P266 1359 aa13.06□□□□□ -0.32
DDB1-212ENST00000538470 C14orf37Q86TY3 774 aa13.05□□□□□ -0.32
DDB1-212ENST00000538470 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
DDB1-212ENST00000538470 NHSL1Q5SYE7 1610 aa13.05□□□□□ -0.32
DDB1-212ENST00000538470 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
DDB1-212ENST00000538470 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
DDB1-212ENST00000538470 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
DDB1-212ENST00000538470 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
DDB1-212ENST00000538470 ATF3P18847 181 aa13.03□□□□□ -0.32
DDB1-212ENST00000538470 ASXL1Q8IXJ9 1541 aa13.03□□□□□ -0.32
DDB1-212ENST00000538470 IFT172Q9UG01 1749 aa13.02□□□□□ -0.32
DDB1-212ENST00000538470 METP08581 1390 aa13.02□□□□□ -0.33
DDB1-212ENST00000538470 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
DDB1-212ENST00000538470 MST1RQ04912 1400 aa13.01□□□□□ -0.33
DDB1-212ENST00000538470 LAMC1P11047 1609 aa13□□□□□ -0.33
DDB1-212ENST00000538470 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
DDB1-212ENST00000538470 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
DDB1-212ENST00000538470 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
DDB1-212ENST00000538470 RGS17Q9UGC6 210 aaPredicted RBP12.99□□□□□ -0.33
DDB1-212ENST00000538470 CCDC144AA2RUR9 1427 aa12.98□□□□□ -0.33
DDB1-212ENST00000538470 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
DDB1-212ENST00000538470 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
DDB1-212ENST00000538470 KNDC1Q76NI1 1749 aa12.98□□□□□ -0.33
DDB1-212ENST00000538470 LRP6O75581 1613 aa12.98□□□□□ -0.33
DDB1-212ENST00000538470 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
DDB1-212ENST00000538470 SETD5Q9C0A6 1442 aa12.96□□□□□ -0.33
DDB1-212ENST00000538470 CDC42BPGQ6DT37 1551 aa12.96□□□□□ -0.33
DDB1-212ENST00000538470 SPATA31E1Q6ZUB1 1445 aa12.95□□□□□ -0.34
DDB1-212ENST00000538470 POTEAQ6S8J7 498 aa12.93□□□□□ -0.34
DDB1-212ENST00000538470 ANKRD30BQ9BXX2 1392 aa12.93□□□□□ -0.34
DDB1-212ENST00000538470 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
DDB1-212ENST00000538470 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
DDB1-212ENST00000538470 TECPR2O15040 1411 aa12.92□□□□□ -0.34
DDB1-212ENST00000538470 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
DDB1-212ENST00000538470 MEX3CQ5U5Q3 659 aaKnown RBP12.9□□□□□ -0.34
DDB1-212ENST00000538470 ZNF772Q68DY9 489 aaPredicted RBP12.9□□□□□ -0.34
DDB1-212ENST00000538470 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
DDB1-212ENST00000538470 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
DDB1-212ENST00000538470 MYOM2P54296 1465 aa12.89□□□□□ -0.35
DDB1-212ENST00000538470 FOXD1Q16676 465 aa12.88□□□□□ -0.35
DDB1-212ENST00000538470 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
DDB1-212ENST00000538470 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
DDB1-212ENST00000538470 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
DDB1-212ENST00000538470 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
DDB1-212ENST00000538470 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
DDB1-212ENST00000538470 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
DDB1-212ENST00000538470 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
DDB1-212ENST00000538470 ADGRF5Q8IZF2 1346 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms