RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 SPHKAPQ2M3C7 1700 aa19.47■□□□□ 0.71
COPS7A-207ENST00000538375 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
COPS7A-207ENST00000538375 POLR1AO95602 1720 aaPredicted RBP19.46■□□□□ 0.71
COPS7A-207ENST00000538375 SLIT1O75093 1534 aa19.46■□□□□ 0.71
COPS7A-207ENST00000538375 ARHGAP23Q9P227 1491 aa19.45■□□□□ 0.7
COPS7A-207ENST00000538375 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
COPS7A-207ENST00000538375 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
COPS7A-207ENST00000538375 TMEM131LA2VDJ0 1609 aa19.43■□□□□ 0.7
COPS7A-207ENST00000538375 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
COPS7A-207ENST00000538375 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
COPS7A-207ENST00000538375 MED14O60244 1454 aa19.42■□□□□ 0.7
COPS7A-207ENST00000538375 TRPM2O94759 1503 aa19.41■□□□□ 0.7
COPS7A-207ENST00000538375 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
COPS7A-207ENST00000538375 CLTCL1P53675 1640 aa19.4■□□□□ 0.7
COPS7A-207ENST00000538375 MYO5BQ9ULV0 1848 aa19.4■□□□□ 0.7
COPS7A-207ENST00000538375 RGL3Q3MIN7 710 aa19.39■□□□□ 0.69
COPS7A-207ENST00000538375 CCDC144AA2RUR9 1427 aa19.39■□□□□ 0.69
COPS7A-207ENST00000538375 IQGAP1P46940 1657 aa19.39■□□□□ 0.69
COPS7A-207ENST00000538375 ZFYVE9O95405 1425 aa19.36■□□□□ 0.69
COPS7A-207ENST00000538375 CPS1P31327 1500 aa19.35■□□□□ 0.69
COPS7A-207ENST00000538375 KIF1BO60333 1816 aa19.35■□□□□ 0.69
COPS7A-207ENST00000538375 PLEKHG1Q9ULL1 1385 aa19.33■□□□□ 0.69
COPS7A-207ENST00000538375 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-207ENST00000538375 RPGRIP1LQ68CZ1 1315 aa19.31■□□□□ 0.68
COPS7A-207ENST00000538375 TOM1O60784 492 aa19.31■□□□□ 0.68
COPS7A-207ENST00000538375 HSPA1LP34931 641 aa19.31■□□□□ 0.68
COPS7A-207ENST00000538375 TBX22Q9Y458 520 aa19.29■□□□□ 0.68
COPS7A-207ENST00000538375 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
COPS7A-207ENST00000538375 KCNA6P17658 529 aa19.28■□□□□ 0.68
COPS7A-207ENST00000538375 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
COPS7A-207ENST00000538375 PIP4K2BP78356 416 aa19.27■□□□□ 0.68
COPS7A-207ENST00000538375 PROSER2Q86WR7 435 aaPredicted RBP19.25■□□□□ 0.67
COPS7A-207ENST00000538375 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
COPS7A-207ENST00000538375 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
COPS7A-207ENST00000538375 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
COPS7A-207ENST00000538375 SPATA31E1Q6ZUB1 1445 aa19.23■□□□□ 0.67
COPS7A-207ENST00000538375 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
COPS7A-207ENST00000538375 ADAMTS13Q76LX8 1427 aa19.22■□□□□ 0.67
COPS7A-207ENST00000538375 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
COPS7A-207ENST00000538375 AMOTL2Q9Y2J4 779 aa19.21■□□□□ 0.67
COPS7A-207ENST00000538375 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
COPS7A-207ENST00000538375 ADGRF5Q8IZF2 1346 aa19.21■□□□□ 0.67
COPS7A-207ENST00000538375 STRCP1A6NGW2 1772 aa19.19■□□□□ 0.66
COPS7A-207ENST00000538375 DCAF11Q8TEB1 546 aa19.18■□□□□ 0.66
COPS7A-207ENST00000538375 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
COPS7A-207ENST00000538375 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
COPS7A-207ENST00000538375 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
COPS7A-207ENST00000538375 SIN3AQ96ST3 1273 aa19.16■□□□□ 0.66
COPS7A-207ENST00000538375 METP08581 1390 aa19.16■□□□□ 0.66
COPS7A-207ENST00000538375 PIK3R4Q99570 1358 aa19.16■□□□□ 0.66
COPS7A-207ENST00000538375 PPLO60437 1756 aa19.16■□□□□ 0.66
COPS7A-207ENST00000538375 DIP2AQ14689 1571 aa19.15■□□□□ 0.66
COPS7A-207ENST00000538375 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
COPS7A-207ENST00000538375 TMEM94Q12767 1356 aa19.15■□□□□ 0.66
COPS7A-207ENST00000538375 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
COPS7A-207ENST00000538375 NRXN3Q9Y4C0 1643 aa19.13■□□□□ 0.65
COPS7A-207ENST00000538375 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
COPS7A-207ENST00000538375 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
COPS7A-207ENST00000538375 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
COPS7A-207ENST00000538375 STK26Q9P289 416 aa19.11■□□□□ 0.65
COPS7A-207ENST00000538375 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
COPS7A-207ENST00000538375 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
COPS7A-207ENST00000538375 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
COPS7A-207ENST00000538375 STAC3Q96MF2 364 aa19.08■□□□□ 0.64
COPS7A-207ENST00000538375 C14orf93Q9H972 538 aaKnown RBP19.08■□□□□ 0.64
COPS7A-207ENST00000538375 IFT172Q9UG01 1749 aa19.08■□□□□ 0.64
COPS7A-207ENST00000538375 MSH6P52701 1360 aa19.06■□□□□ 0.64
COPS7A-207ENST00000538375 PIK3C2GO75747 1445 aa19.06■□□□□ 0.64
COPS7A-207ENST00000538375 MYOM2P54296 1465 aa19.04■□□□□ 0.64
COPS7A-207ENST00000538375 ATF3P18847 181 aa19.04■□□□□ 0.64
COPS7A-207ENST00000538375 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
COPS7A-207ENST00000538375 C19orf44Q9H6X5 657 aa19.04■□□□□ 0.64
COPS7A-207ENST00000538375 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.63
COPS7A-207ENST00000538375 FAM135BQ49AJ0 1406 aa19.01■□□□□ 0.63
COPS7A-207ENST00000538375 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
COPS7A-207ENST00000538375 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
COPS7A-207ENST00000538375 SLAIN2Q9P270 581 aa19■□□□□ 0.63
COPS7A-207ENST00000538375 ROBO2Q9HCK4 1378 aa19■□□□□ 0.63
COPS7A-207ENST00000538375 NRXN1Q9ULB1 1477 aa19■□□□□ 0.63
COPS7A-207ENST00000538375 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
COPS7A-207ENST00000538375 XRN1Q8IZH2 1706 aaKnown RBP19■□□□□ 0.63
COPS7A-207ENST00000538375 LRPPRCP42704 1394 aaKnown RBP18.99■□□□□ 0.63
COPS7A-207ENST00000538375 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
COPS7A-207ENST00000538375 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
COPS7A-207ENST00000538375 RGS17Q9UGC6 210 aaPredicted RBP18.99■□□□□ 0.63
COPS7A-207ENST00000538375 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
COPS7A-207ENST00000538375 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
COPS7A-207ENST00000538375 ABCC11Q96J66 1382 aa18.96■□□□□ 0.63
COPS7A-207ENST00000538375 POGKQ9P215 609 aa18.96■□□□□ 0.63
COPS7A-207ENST00000538375 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
COPS7A-207ENST00000538375 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
COPS7A-207ENST00000538375 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
COPS7A-207ENST00000538375 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
COPS7A-207ENST00000538375 LAMC1P11047 1609 aa18.93■□□□□ 0.62
COPS7A-207ENST00000538375 ASXL1Q8IXJ9 1541 aa18.93■□□□□ 0.62
COPS7A-207ENST00000538375 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
COPS7A-207ENST00000538375 NBPF1Q3BBV0 1214 aa18.92■□□□□ 0.62
COPS7A-207ENST00000538375 SIRT1Q96EB6 747 aa18.92■□□□□ 0.62
COPS7A-207ENST00000538375 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
COPS7A-207ENST00000538375 PLEKHH1Q9ULM0 1364 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms