RNA–Protein interactions for RNA: ENST00000538258.1

PGA3-204, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2 BASIC

Gene PGA3, Length 867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-204ENST00000538258 HRCP23327 699 aa13.43□□□□□ -0.26
PGA3-204ENST00000538258 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
PGA3-204ENST00000538258 MED14O60244 1454 aa13.42□□□□□ -0.26
PGA3-204ENST00000538258 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
PGA3-204ENST00000538258 KIF1BO60333 1816 aa13.42□□□□□ -0.26
PGA3-204ENST00000538258 LTKP29376 864 aa13.42□□□□□ -0.26
PGA3-204ENST00000538258 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
PGA3-204ENST00000538258 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
PGA3-204ENST00000538258 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
PGA3-204ENST00000538258 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
PGA3-204ENST00000538258 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
PGA3-204ENST00000538258 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
PGA3-204ENST00000538258 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.37□□□□□ -0.27
PGA3-204ENST00000538258 BCANQ96GW7 911 aa13.37□□□□□ -0.27
PGA3-204ENST00000538258 CCDC144AA2RUR9 1427 aa13.37□□□□□ -0.27
PGA3-204ENST00000538258 ZNF335Q9H4Z2 1342 aaPredicted RBP13.37□□□□□ -0.27
PGA3-204ENST00000538258 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
PGA3-204ENST00000538258 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
PGA3-204ENST00000538258 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
PGA3-204ENST00000538258 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.27
PGA3-204ENST00000538258 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
PGA3-204ENST00000538258 HSPA1LP34931 641 aa13.32□□□□□ -0.28
PGA3-204ENST00000538258 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
PGA3-204ENST00000538258 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
PGA3-204ENST00000538258 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
PGA3-204ENST00000538258 ANKRD30BQ9BXX2 1392 aa13.31□□□□□ -0.28
PGA3-204ENST00000538258 PPLO60437 1756 aa13.3□□□□□ -0.28
PGA3-204ENST00000538258 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
PGA3-204ENST00000538258 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
PGA3-204ENST00000538258 RPGRIP1LQ68CZ1 1315 aa13.3□□□□□ -0.28
PGA3-204ENST00000538258 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
PGA3-204ENST00000538258 CPS1P31327 1500 aa13.29□□□□□ -0.28
PGA3-204ENST00000538258 SPATA31E1Q6ZUB1 1445 aa13.29□□□□□ -0.28
PGA3-204ENST00000538258 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
PGA3-204ENST00000538258 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
PGA3-204ENST00000538258 TBX22Q9Y458 520 aa13.27□□□□□ -0.29
PGA3-204ENST00000538258 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
PGA3-204ENST00000538258 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
PGA3-204ENST00000538258 IFT172Q9UG01 1749 aa13.26□□□□□ -0.29
PGA3-204ENST00000538258 NRXN3Q9Y4C0 1643 aa13.26□□□□□ -0.29
PGA3-204ENST00000538258 SETBP1Q9Y6X0 1596 aa13.26□□□□□ -0.29
PGA3-204ENST00000538258 KCNA6P17658 529 aa13.25□□□□□ -0.29
PGA3-204ENST00000538258 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
PGA3-204ENST00000538258 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
PGA3-204ENST00000538258 TOM1O60784 492 aa13.23□□□□□ -0.29
PGA3-204ENST00000538258 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
PGA3-204ENST00000538258 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
PGA3-204ENST00000538258 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
PGA3-204ENST00000538258 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
PGA3-204ENST00000538258 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
PGA3-204ENST00000538258 PROSER2Q86WR7 435 aaPredicted RBP13.21□□□□□ -0.29
PGA3-204ENST00000538258 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
PGA3-204ENST00000538258 XIRP1Q702N8 1843 aaKnown RBP13.2□□□□□ -0.3
PGA3-204ENST00000538258 METP08581 1390 aa13.2□□□□□ -0.3
PGA3-204ENST00000538258 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
PGA3-204ENST00000538258 MYOM2P54296 1465 aa13.19□□□□□ -0.3
PGA3-204ENST00000538258 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
PGA3-204ENST00000538258 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
PGA3-204ENST00000538258 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
PGA3-204ENST00000538258 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
PGA3-204ENST00000538258 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
PGA3-204ENST00000538258 XRN1Q8IZH2 1706 aaKnown RBP13.17□□□□□ -0.3
PGA3-204ENST00000538258 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
PGA3-204ENST00000538258 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
PGA3-204ENST00000538258 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
PGA3-204ENST00000538258 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
PGA3-204ENST00000538258 NEUROD1Q13562 356 aa13.15□□□□□ -0.3
PGA3-204ENST00000538258 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
PGA3-204ENST00000538258 LAMC1P11047 1609 aa13.14□□□□□ -0.31
PGA3-204ENST00000538258 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
PGA3-204ENST00000538258 MSH6P52701 1360 aa13.13□□□□□ -0.31
PGA3-204ENST00000538258 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
PGA3-204ENST00000538258 CFAP70Q5T0N1 1121 aa13.12□□□□□ -0.31
PGA3-204ENST00000538258 TMEM132EQ6IEE7 984 aa13.12□□□□□ -0.31
PGA3-204ENST00000538258 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
PGA3-204ENST00000538258 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
PGA3-204ENST00000538258 STK26Q9P289 416 aa13.11□□□□□ -0.31
PGA3-204ENST00000538258 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
PGA3-204ENST00000538258 LRPPRCP42704 1394 aaKnown RBP13.1□□□□□ -0.31
PGA3-204ENST00000538258 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
PGA3-204ENST00000538258 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
PGA3-204ENST00000538258 KNDC1Q76NI1 1749 aa13.09□□□□□ -0.31
PGA3-204ENST00000538258 PRAG1Q86YV5 1406 aa13.09□□□□□ -0.31
PGA3-204ENST00000538258 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
PGA3-204ENST00000538258 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
PGA3-204ENST00000538258 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.09□□□□□ -0.31
PGA3-204ENST00000538258 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
PGA3-204ENST00000538258 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
PGA3-204ENST00000538258 ATF3P18847 181 aa13.07□□□□□ -0.32
PGA3-204ENST00000538258 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
PGA3-204ENST00000538258 TECPR2O15040 1411 aa13.06□□□□□ -0.32
PGA3-204ENST00000538258 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
PGA3-204ENST00000538258 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
PGA3-204ENST00000538258 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
PGA3-204ENST00000538258 KIAA1210Q9ULL0 1709 aa13.05□□□□□ -0.32
PGA3-204ENST00000538258 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
PGA3-204ENST00000538258 DCCP43146 1447 aa13.05□□□□□ -0.32
PGA3-204ENST00000538258 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
PGA3-204ENST00000538258 SLAIN2Q9P270 581 aa13.04□□□□□ -0.32
PGA3-204ENST00000538258 FAM135BQ49AJ0 1406 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms