RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RIMS2Q9UQ26 1411 aa25.85■■□□□ 1.73
GPN3-202ENST00000537466 FOXD1Q16676 465 aa25.81■■□□□ 1.72
GPN3-202ENST00000537466 MPHOSPH9Q99550 1183 aa25.8■■□□□ 1.72
GPN3-202ENST00000537466 IQSEC2Q5JU85 1478 aa25.8■■□□□ 1.72
GPN3-202ENST00000537466 CPS1P31327 1500 aa25.8■■□□□ 1.72
GPN3-202ENST00000537466 NUTM2DQ5VT03 806 aaPredicted RBP25.77■■□□□ 1.72
GPN3-202ENST00000537466 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
GPN3-202ENST00000537466 PLEKHG1Q9ULL1 1385 aa25.75■■□□□ 1.71
GPN3-202ENST00000537466 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
GPN3-202ENST00000537466 ACIN1Q9UKV3 1341 aaKnown RBP25.74■■□□□ 1.71
GPN3-202ENST00000537466 SLC26A8Q96RN1 970 aa25.74■■□□□ 1.71
GPN3-202ENST00000537466 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
GPN3-202ENST00000537466 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.72■■□□□ 1.71
GPN3-202ENST00000537466 NEXMIFQ5QGS0 1516 aa25.72■■□□□ 1.71
GPN3-202ENST00000537466 ZNF326Q5BKZ1 582 aaKnown RBP25.71■■□□□ 1.71
GPN3-202ENST00000537466 BCANQ96GW7 911 aa25.71■■□□□ 1.71
GPN3-202ENST00000537466 XIRP1Q702N8 1843 aaKnown RBP25.7■■□□□ 1.71
GPN3-202ENST00000537466 CHD2O14647 1828 aaKnown RBP25.69■■□□□ 1.7
GPN3-202ENST00000537466 LRRC7Q96NW7 1537 aa25.68■■□□□ 1.7
GPN3-202ENST00000537466 NRXN3Q9Y4C0 1643 aa25.68■■□□□ 1.7
GPN3-202ENST00000537466 ADAMTS13Q76LX8 1427 aa25.67■■□□□ 1.7
GPN3-202ENST00000537466 PPLO60437 1756 aa25.67■■□□□ 1.7
GPN3-202ENST00000537466 NWD1Q149M9 1564 aa25.66■■□□□ 1.7
GPN3-202ENST00000537466 CCDC144AA2RUR9 1427 aa25.65■■□□□ 1.7
GPN3-202ENST00000537466 DIP2AQ14689 1571 aa25.65■■□□□ 1.7
GPN3-202ENST00000537466 HRCP23327 699 aa25.64■■□□□ 1.69
GPN3-202ENST00000537466 SETBP1Q9Y6X0 1596 aa25.63■■□□□ 1.69
GPN3-202ENST00000537466 KCNA6P17658 529 aa25.61■■□□□ 1.69
GPN3-202ENST00000537466 TBX22Q9Y458 520 aa25.6■■□□□ 1.69
GPN3-202ENST00000537466 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
GPN3-202ENST00000537466 UBAP1LF5GYI3 381 aa25.59■■□□□ 1.69
GPN3-202ENST00000537466 SPATA31E1Q6ZUB1 1445 aa25.58■■□□□ 1.69
GPN3-202ENST00000537466 ALKQ9UM73 1620 aa25.58■■□□□ 1.68
GPN3-202ENST00000537466 NKTRP30414 1462 aaKnown RBP25.57■■□□□ 1.68
GPN3-202ENST00000537466 SETD1AO15047 1707 aaKnown RBP25.55■■□□□ 1.68
GPN3-202ENST00000537466 RPGRIP1LQ68CZ1 1315 aa25.54■■□□□ 1.68
GPN3-202ENST00000537466 RGL3Q3MIN7 710 aa25.53■■□□□ 1.68
GPN3-202ENST00000537466 TMEM94Q12767 1356 aa25.52■■□□□ 1.68
GPN3-202ENST00000537466 PIK3R4Q99570 1358 aa25.52■■□□□ 1.68
GPN3-202ENST00000537466 ANKRD30BQ9BXX2 1392 aa25.52■■□□□ 1.68
GPN3-202ENST00000537466 RBM33Q96EV2 1170 aaKnown RBP25.52■■□□□ 1.68
GPN3-202ENST00000537466 PTPRUQ92729 1446 aa25.52■■□□□ 1.68
GPN3-202ENST00000537466 VGFO15240 615 aaPredicted RBP25.51■■□□□ 1.67
GPN3-202ENST00000537466 PROSER2Q86WR7 435 aaPredicted RBP25.51■■□□□ 1.67
GPN3-202ENST00000537466 XRN1Q8IZH2 1706 aaKnown RBP25.51■■□□□ 1.67
GPN3-202ENST00000537466 METP08581 1390 aa25.49■■□□□ 1.67
GPN3-202ENST00000537466 TOM1O60784 492 aa25.48■■□□□ 1.67
GPN3-202ENST00000537466 PIP4K2BP78356 416 aa25.46■■□□□ 1.67
GPN3-202ENST00000537466 AMOTL2Q9Y2J4 779 aa25.45■■□□□ 1.66
GPN3-202ENST00000537466 ADGRF5Q8IZF2 1346 aa25.44■■□□□ 1.66
GPN3-202ENST00000537466 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
GPN3-202ENST00000537466 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
GPN3-202ENST00000537466 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
GPN3-202ENST00000537466 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
GPN3-202ENST00000537466 MSH6P52701 1360 aa25.37■■□□□ 1.65
GPN3-202ENST00000537466 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
GPN3-202ENST00000537466 MYOM2P54296 1465 aa25.37■■□□□ 1.65
GPN3-202ENST00000537466 NRXN1Q9ULB1 1477 aa25.35■■□□□ 1.65
GPN3-202ENST00000537466 ASXL1Q8IXJ9 1541 aa25.34■■□□□ 1.65
GPN3-202ENST00000537466 NALCNQ8IZF0 1738 aa25.33■■□□□ 1.64
GPN3-202ENST00000537466 C14orf37Q86TY3 774 aa25.32■■□□□ 1.64
GPN3-202ENST00000537466 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
GPN3-202ENST00000537466 LAMC1P11047 1609 aa25.3■■□□□ 1.64
GPN3-202ENST00000537466 HSPA1LP34931 641 aa25.3■■□□□ 1.64
GPN3-202ENST00000537466 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
GPN3-202ENST00000537466 PRAG1Q86YV5 1406 aa25.29■■□□□ 1.64
GPN3-202ENST00000537466 ROBO2Q9HCK4 1378 aa25.28■■□□□ 1.64
GPN3-202ENST00000537466 KNDC1Q76NI1 1749 aa25.28■■□□□ 1.64
GPN3-202ENST00000537466 DHX57Q6P158 1386 aaKnown RBP25.27■■□□□ 1.64
GPN3-202ENST00000537466 C19orf44Q9H6X5 657 aa25.27■■□□□ 1.64
GPN3-202ENST00000537466 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
GPN3-202ENST00000537466 DCAF11Q8TEB1 546 aa25.26■■□□□ 1.63
GPN3-202ENST00000537466 FAM135BQ49AJ0 1406 aa25.25■■□□□ 1.63
GPN3-202ENST00000537466 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
GPN3-202ENST00000537466 C14orf93Q9H972 538 aaKnown RBP25.24■■□□□ 1.63
GPN3-202ENST00000537466 ADGRL3Q9HAR2 1447 aa25.24■■□□□ 1.63
GPN3-202ENST00000537466 CFAP70Q5T0N1 1121 aa25.23■■□□□ 1.63
GPN3-202ENST00000537466 SLAIN2Q9P270 581 aa25.23■■□□□ 1.63
GPN3-202ENST00000537466 DCCP43146 1447 aa25.22■■□□□ 1.63
GPN3-202ENST00000537466 LRPPRCP42704 1394 aaKnown RBP25.22■■□□□ 1.63
GPN3-202ENST00000537466 ATF3P18847 181 aa25.21■■□□□ 1.63
GPN3-202ENST00000537466 CADPS2Q86UW7 1296 aa25.21■■□□□ 1.63
GPN3-202ENST00000537466 STK26Q9P289 416 aa25.21■■□□□ 1.63
GPN3-202ENST00000537466 TECPR2O15040 1411 aa25.21■■□□□ 1.63
GPN3-202ENST00000537466 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.62
GPN3-202ENST00000537466 ABCC11Q96J66 1382 aa25.18■■□□□ 1.62
GPN3-202ENST00000537466 SIN3AQ96ST3 1273 aa25.17■■□□□ 1.62
GPN3-202ENST00000537466 ADGRB1O14514 1584 aa25.17■■□□□ 1.62
GPN3-202ENST00000537466 PHLPP1O60346 1717 aa25.16■■□□□ 1.62
GPN3-202ENST00000537466 MST1RQ04912 1400 aa25.16■■□□□ 1.62
GPN3-202ENST00000537466 STAC3Q96MF2 364 aa25.15■■□□□ 1.62
GPN3-202ENST00000537466 WAPLQ7Z5K2 1190 aa25.14■■□□□ 1.61
GPN3-202ENST00000537466 PLEKHH1Q9ULM0 1364 aa25.14■■□□□ 1.61
GPN3-202ENST00000537466 KIAA1210Q9ULL0 1709 aa25.11■■□□□ 1.61
GPN3-202ENST00000537466 CDC42BPGQ6DT37 1551 aa25.1■■□□□ 1.61
GPN3-202ENST00000537466 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
GPN3-202ENST00000537466 COL16A1Q07092 1604 aaPredicted RBP25.08■■□□□ 1.61
GPN3-202ENST00000537466 DLC1Q96QB1 1528 aa25.08■■□□□ 1.61
GPN3-202ENST00000537466 BRINP3Q76B58 766 aa25.08■■□□□ 1.6
GPN3-202ENST00000537466 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms