RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 UHRF1BP1Q6BDS2 1440 aa12.83□□□□□ -0.36
RFX4-204ENST00000536688 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
RFX4-204ENST00000536688 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.36
RFX4-204ENST00000536688 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
RFX4-204ENST00000536688 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
RFX4-204ENST00000536688 SASS6Q6UVJ0 657 aa12.82□□□□□ -0.36
RFX4-204ENST00000536688 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
RFX4-204ENST00000536688 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
RFX4-204ENST00000536688 KDM6BO15054 1643 aa12.82□□□□□ -0.36
RFX4-204ENST00000536688 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
RFX4-204ENST00000536688 SEC24BO95487 1268 aa12.81□□□□□ -0.36
RFX4-204ENST00000536688 GAS2L3Q86XJ1 694 aa12.81□□□□□ -0.36
RFX4-204ENST00000536688 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
RFX4-204ENST00000536688 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
RFX4-204ENST00000536688 DDIT3P35638 169 aa12.8□□□□□ -0.36
RFX4-204ENST00000536688 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
RFX4-204ENST00000536688 GBP4Q96PP9 640 aa12.8□□□□□ -0.36
RFX4-204ENST00000536688 FBLN2P98095 1184 aa12.8□□□□□ -0.36
RFX4-204ENST00000536688 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
RFX4-204ENST00000536688 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
RFX4-204ENST00000536688 ROCK1Q13464 1354 aa12.8□□□□□ -0.36
RFX4-204ENST00000536688 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
RFX4-204ENST00000536688 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
RFX4-204ENST00000536688 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
RFX4-204ENST00000536688 CHD1O14646 1710 aa12.78□□□□□ -0.36
RFX4-204ENST00000536688 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
RFX4-204ENST00000536688 DUSP27Q5VZP5 1158 aa12.78□□□□□ -0.36
RFX4-204ENST00000536688 PDLIM2Q96JY6 352 aa12.77□□□□□ -0.36
RFX4-204ENST00000536688 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
RFX4-204ENST00000536688 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 RBM25P49756 843 aaKnown RBP12.76□□□□□ -0.37
RFX4-204ENST00000536688 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 SLC20A2Q08357 652 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 ZKSCAN5Q9Y2L8 839 aa12.76□□□□□ -0.37
RFX4-204ENST00000536688 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
RFX4-204ENST00000536688 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
RFX4-204ENST00000536688 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
RFX4-204ENST00000536688 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
RFX4-204ENST00000536688 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
RFX4-204ENST00000536688 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
RFX4-204ENST00000536688 KIAA1107Q9UPP5 1409 aa12.74□□□□□ -0.37
RFX4-204ENST00000536688 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
RFX4-204ENST00000536688 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
RFX4-204ENST00000536688 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
RFX4-204ENST00000536688 SNX21Q969T3 373 aa12.74□□□□□ -0.37
RFX4-204ENST00000536688 ZNF445P59923 1031 aa12.73□□□□□ -0.37
RFX4-204ENST00000536688 MYRIPQ8NFW9 859 aa12.73□□□□□ -0.37
RFX4-204ENST00000536688 HSP90AB1P08238 724 aaKnown RBP12.73□□□□□ -0.37
RFX4-204ENST00000536688 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
RFX4-204ENST00000536688 TRMT2AQ8IZ69 625 aaKnown RBP12.73□□□□□ -0.37
RFX4-204ENST00000536688 PRIMPOLQ96LW4 560 aa12.73□□□□□ -0.37
RFX4-204ENST00000536688 LRRIQ1Q96JM4 1722 aa12.73□□□□□ -0.37
RFX4-204ENST00000536688 CUL7Q14999 1698 aa12.72□□□□□ -0.37
RFX4-204ENST00000536688 IGHDP01880 384 aa12.72□□□□□ -0.37
RFX4-204ENST00000536688 HMGN5P82970 282 aaKnown RBP12.72□□□□□ -0.37
RFX4-204ENST00000536688 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
RFX4-204ENST00000536688 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
RFX4-204ENST00000536688 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
RFX4-204ENST00000536688 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
RFX4-204ENST00000536688 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
RFX4-204ENST00000536688 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
RFX4-204ENST00000536688 PMFBP1Q8TBY8 1022 aa12.71□□□□□ -0.37
RFX4-204ENST00000536688 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.37
RFX4-204ENST00000536688 CHMP7Q8WUX9 453 aaPredicted RBP12.71□□□□□ -0.37
RFX4-204ENST00000536688 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
RFX4-204ENST00000536688 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
RFX4-204ENST00000536688 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
RFX4-204ENST00000536688 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
RFX4-204ENST00000536688 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
RFX4-204ENST00000536688 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
RFX4-204ENST00000536688 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
RFX4-204ENST00000536688 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
RFX4-204ENST00000536688 C22orf23Q9BZE7 217 aa12.69□□□□□ -0.38
RFX4-204ENST00000536688 XPCQ01831 940 aaPredicted RBP12.69□□□□□ -0.38
RFX4-204ENST00000536688 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
RFX4-204ENST00000536688 ZNF830Q96NB3 372 aaPredicted RBP12.69□□□□□ -0.38
RFX4-204ENST00000536688 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
RFX4-204ENST00000536688 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
RFX4-204ENST00000536688 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
RFX4-204ENST00000536688 SAMD9Q5K651 1589 aa12.67□□□□□ -0.38
RFX4-204ENST00000536688 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
RFX4-204ENST00000536688 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
RFX4-204ENST00000536688 FOXD1Q16676 465 aa12.67□□□□□ -0.38
RFX4-204ENST00000536688 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
RFX4-204ENST00000536688 PZPP20742 1482 aa12.66□□□□□ -0.38
RFX4-204ENST00000536688 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
RFX4-204ENST00000536688 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
RFX4-204ENST00000536688 ADAMTS12P58397 1594 aa12.65□□□□□ -0.38
RFX4-204ENST00000536688 DNAJC2Q99543 621 aaKnown RBP12.64□□□□□ -0.39
RFX4-204ENST00000536688 FEZ1Q99689 392 aa12.64□□□□□ -0.39
RFX4-204ENST00000536688 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
RFX4-204ENST00000536688 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
RFX4-204ENST00000536688 DNMT1P26358 1616 aaKnown RBP12.64□□□□□ -0.39
RFX4-204ENST00000536688 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
RFX4-204ENST00000536688 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
RFX4-204ENST00000536688 GABPB1Q06547 395 aaPredicted RBP12.63□□□□□ -0.39
RFX4-204ENST00000536688 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms