RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 TOM1O60784 492 aa22.64■■□□□ 1.21
UBC-204ENST00000536661 PIP4K2BP78356 416 aa22.64■■□□□ 1.21
UBC-204ENST00000536661 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
UBC-204ENST00000536661 NWD1Q149M9 1564 aa22.61■■□□□ 1.21
UBC-204ENST00000536661 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
UBC-204ENST00000536661 HSPA1LP34931 641 aa22.6■■□□□ 1.21
UBC-204ENST00000536661 ILDR2Q71H61 639 aa22.6■■□□□ 1.21
UBC-204ENST00000536661 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
UBC-204ENST00000536661 PLEKHG1Q9ULL1 1385 aa22.6■■□□□ 1.21
UBC-204ENST00000536661 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
UBC-204ENST00000536661 CHD2O14647 1828 aaKnown RBP22.58■■□□□ 1.21
UBC-204ENST00000536661 TRPM2O94759 1503 aa22.57■■□□□ 1.2
UBC-204ENST00000536661 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
UBC-204ENST00000536661 KIF1BO60333 1816 aa22.55■■□□□ 1.2
UBC-204ENST00000536661 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
UBC-204ENST00000536661 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
UBC-204ENST00000536661 BCANQ96GW7 911 aa22.54■■□□□ 1.2
UBC-204ENST00000536661 HDGFP51858 240 aaKnown RBP22.53■■□□□ 1.2
UBC-204ENST00000536661 DIP2AQ14689 1571 aa22.53■■□□□ 1.2
UBC-204ENST00000536661 KCNA6P17658 529 aa22.52■■□□□ 1.2
UBC-204ENST00000536661 NUTM2DQ5VT03 806 aaPredicted RBP22.52■■□□□ 1.2
UBC-204ENST00000536661 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.2
UBC-204ENST00000536661 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
UBC-204ENST00000536661 ADAMTS13Q76LX8 1427 aa22.51■■□□□ 1.19
UBC-204ENST00000536661 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
UBC-204ENST00000536661 NRXN3Q9Y4C0 1643 aa22.49■■□□□ 1.19
UBC-204ENST00000536661 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
UBC-204ENST00000536661 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
UBC-204ENST00000536661 PROSER2Q86WR7 435 aaPredicted RBP22.45■■□□□ 1.18
UBC-204ENST00000536661 RBM33Q96EV2 1170 aaKnown RBP22.45■■□□□ 1.18
UBC-204ENST00000536661 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
UBC-204ENST00000536661 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
UBC-204ENST00000536661 ZNF326Q5BKZ1 582 aaKnown RBP22.42■■□□□ 1.18
UBC-204ENST00000536661 MED1Q15648 1581 aaPredicted RBP22.41■■□□□ 1.18
UBC-204ENST00000536661 XRN1Q8IZH2 1706 aaKnown RBP22.4■■□□□ 1.18
UBC-204ENST00000536661 PIK3R4Q99570 1358 aa22.4■■□□□ 1.18
UBC-204ENST00000536661 PPLO60437 1756 aa22.39■■□□□ 1.17
UBC-204ENST00000536661 ROBO1Q9Y6N7 1651 aa22.38■■□□□ 1.17
UBC-204ENST00000536661 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
UBC-204ENST00000536661 FOXD1Q16676 465 aa22.37■■□□□ 1.17
UBC-204ENST00000536661 SOCS7O14512 581 aa22.36■■□□□ 1.17
UBC-204ENST00000536661 SETD1AO15047 1707 aaKnown RBP22.36■■□□□ 1.17
UBC-204ENST00000536661 MSH6P52701 1360 aa22.36■■□□□ 1.17
UBC-204ENST00000536661 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
UBC-204ENST00000536661 SETD5Q9C0A6 1442 aa22.35■■□□□ 1.17
UBC-204ENST00000536661 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.34■■□□□ 1.17
UBC-204ENST00000536661 NCOA3Q9Y6Q9 1424 aa22.32■■□□□ 1.16
UBC-204ENST00000536661 IFT172Q9UG01 1749 aa22.32■■□□□ 1.16
UBC-204ENST00000536661 MPHOSPH9Q99550 1183 aa22.32■■□□□ 1.16
UBC-204ENST00000536661 METP08581 1390 aa22.31■■□□□ 1.16
UBC-204ENST00000536661 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
UBC-204ENST00000536661 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
UBC-204ENST00000536661 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
UBC-204ENST00000536661 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
UBC-204ENST00000536661 C14orf37Q86TY3 774 aa22.26■■□□□ 1.15
UBC-204ENST00000536661 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
UBC-204ENST00000536661 PHLPP1O60346 1717 aa22.26■■□□□ 1.15
UBC-204ENST00000536661 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
UBC-204ENST00000536661 VGFO15240 615 aaPredicted RBP22.25■■□□□ 1.15
UBC-204ENST00000536661 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
UBC-204ENST00000536661 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
UBC-204ENST00000536661 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
UBC-204ENST00000536661 DCCP43146 1447 aa22.2■■□□□ 1.14
UBC-204ENST00000536661 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
UBC-204ENST00000536661 COL16A1Q07092 1604 aaPredicted RBP22.19■■□□□ 1.14
UBC-204ENST00000536661 ATF3P18847 181 aa22.18■■□□□ 1.14
UBC-204ENST00000536661 RGL3Q3MIN7 710 aa22.18■■□□□ 1.14
UBC-204ENST00000536661 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
UBC-204ENST00000536661 PTCH1Q13635 1447 aa22.17■■□□□ 1.14
UBC-204ENST00000536661 ADGRL3Q9HAR2 1447 aa22.17■■□□□ 1.14
UBC-204ENST00000536661 RGS17Q9UGC6 210 aaPredicted RBP22.17■■□□□ 1.14
UBC-204ENST00000536661 PRAG1Q86YV5 1406 aa22.16■■□□□ 1.14
UBC-204ENST00000536661 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
UBC-204ENST00000536661 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
UBC-204ENST00000536661 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.14
UBC-204ENST00000536661 MST1RQ04912 1400 aa22.14■■□□□ 1.13
UBC-204ENST00000536661 ROBO2Q9HCK4 1378 aa22.13■■□□□ 1.13
UBC-204ENST00000536661 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
UBC-204ENST00000536661 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
UBC-204ENST00000536661 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
UBC-204ENST00000536661 NHSL1Q5SYE7 1610 aa22.11■■□□□ 1.13
UBC-204ENST00000536661 MYOM2P54296 1465 aa22.09■■□□□ 1.13
UBC-204ENST00000536661 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
UBC-204ENST00000536661 LAMC1P11047 1609 aa22.08■■□□□ 1.13
UBC-204ENST00000536661 SHPRHQ149N8 1683 aa22.07■■□□□ 1.12
UBC-204ENST00000536661 NRXN1Q9ULB1 1477 aa22.07■■□□□ 1.12
UBC-204ENST00000536661 HRCP23327 699 aa22.06■■□□□ 1.12
UBC-204ENST00000536661 JCADQ9P266 1359 aa22.06■■□□□ 1.12
UBC-204ENST00000536661 TECPR2O15040 1411 aa22.05■■□□□ 1.12
UBC-204ENST00000536661 CDC42BPGQ6DT37 1551 aa22.03■■□□□ 1.12
UBC-204ENST00000536661 LRPPRCP42704 1394 aaKnown RBP22.02■■□□□ 1.12
UBC-204ENST00000536661 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
UBC-204ENST00000536661 C1orf167Q5SNV9 1468 aa22.02■■□□□ 1.12
UBC-204ENST00000536661 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
UBC-204ENST00000536661 STK26Q9P289 416 aa22■■□□□ 1.11
UBC-204ENST00000536661 YTHDC2Q9H6S0 1430 aaKnown RBP21.99■■□□□ 1.11
UBC-204ENST00000536661 ABCC11Q96J66 1382 aa21.99■■□□□ 1.11
UBC-204ENST00000536661 LRP6O75581 1613 aa21.98■■□□□ 1.11
UBC-204ENST00000536661 C14orf93Q9H972 538 aaKnown RBP21.97■■□□□ 1.11
UBC-204ENST00000536661 PLEKHH1Q9ULM0 1364 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms