RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 PIP4K2BP78356 416 aa27.75■■■□□ 2.03
CACNB1-205ENST00000536613 MYO5BQ9ULV0 1848 aa27.74■■■□□ 2.03
CACNB1-205ENST00000536613 PLEKHG1Q9ULL1 1385 aa27.73■■■□□ 2.03
CACNB1-205ENST00000536613 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
CACNB1-205ENST00000536613 ALKQ9UM73 1620 aa27.73■■■□□ 2.03
CACNB1-205ENST00000536613 BCANQ96GW7 911 aa27.72■■■□□ 2.03
CACNB1-205ENST00000536613 KCNA6P17658 529 aa27.71■■■□□ 2.03
CACNB1-205ENST00000536613 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.71■■■□□ 2.03
CACNB1-205ENST00000536613 SPHKAPQ2M3C7 1700 aa27.67■■■□□ 2.02
CACNB1-205ENST00000536613 SENP3Q9H4L4 574 aaPredicted RBP27.67■■■□□ 2.02
CACNB1-205ENST00000536613 HSPA1LP34931 641 aa27.65■■■□□ 2.02
CACNB1-205ENST00000536613 NWD1Q149M9 1564 aa27.65■■■□□ 2.02
CACNB1-205ENST00000536613 TMEM94Q12767 1356 aa27.64■■■□□ 2.02
CACNB1-205ENST00000536613 NUTM2DQ5VT03 806 aaPredicted RBP27.64■■■□□ 2.02
CACNB1-205ENST00000536613 NKTRP30414 1462 aaKnown RBP27.64■■■□□ 2.01
CACNB1-205ENST00000536613 TRIM52Q96A61 297 aa27.63■■■□□ 2.01
CACNB1-205ENST00000536613 DISP3Q9P2K9 1392 aa27.62■■■□□ 2.01
CACNB1-205ENST00000536613 TBX22Q9Y458 520 aa27.62■■■□□ 2.01
CACNB1-205ENST00000536613 TRPM2O94759 1503 aa27.62■■■□□ 2.01
CACNB1-205ENST00000536613 PROSER2Q86WR7 435 aaPredicted RBP27.61■■■□□ 2.01
CACNB1-205ENST00000536613 XIRP1Q702N8 1843 aaKnown RBP27.61■■■□□ 2.01
CACNB1-205ENST00000536613 ADAMTS13Q76LX8 1427 aa27.59■■■□□ 2.01
CACNB1-205ENST00000536613 DIP2AQ14689 1571 aa27.57■■■□□ 2
CACNB1-205ENST00000536613 CLTCL1P53675 1640 aa27.57■■■□□ 2
CACNB1-205ENST00000536613 SLC4A1APQ9BWU0 796 aaKnown RBP27.56■■■□□ 2
CACNB1-205ENST00000536613 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
CACNB1-205ENST00000536613 RBM33Q96EV2 1170 aaKnown RBP27.55■■■□□ 2
CACNB1-205ENST00000536613 CHD2O14647 1828 aaKnown RBP27.53■■■□□ 2
CACNB1-205ENST00000536613 PIK3R4Q99570 1358 aa27.52■■■□□ 2
CACNB1-205ENST00000536613 SETBP1Q9Y6X0 1596 aa27.48■■□□□ 1.99
CACNB1-205ENST00000536613 MSH6P52701 1360 aa27.48■■□□□ 1.99
CACNB1-205ENST00000536613 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
CACNB1-205ENST00000536613 FAM135BQ49AJ0 1406 aa27.46■■□□□ 1.99
CACNB1-205ENST00000536613 NRXN3Q9Y4C0 1643 aa27.45■■□□□ 1.99
CACNB1-205ENST00000536613 NCOA3Q9Y6Q9 1424 aa27.44■■□□□ 1.98
CACNB1-205ENST00000536613 KIF1BO60333 1816 aa27.43■■□□□ 1.98
CACNB1-205ENST00000536613 PTPRUQ92729 1446 aa27.42■■□□□ 1.98
CACNB1-205ENST00000536613 FOXD1Q16676 465 aa27.42■■□□□ 1.98
CACNB1-205ENST00000536613 AMOTL2Q9Y2J4 779 aa27.42■■□□□ 1.98
CACNB1-205ENST00000536613 ILDR2Q71H61 639 aa27.41■■□□□ 1.98
CACNB1-205ENST00000536613 MPHOSPH9Q99550 1183 aa27.4■■□□□ 1.98
CACNB1-205ENST00000536613 MED1Q15648 1581 aaPredicted RBP27.39■■□□□ 1.97
CACNB1-205ENST00000536613 C14orf37Q86TY3 774 aa27.38■■□□□ 1.97
CACNB1-205ENST00000536613 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
CACNB1-205ENST00000536613 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
CACNB1-205ENST00000536613 METP08581 1390 aa27.37■■□□□ 1.97
CACNB1-205ENST00000536613 RPGRIP1LQ68CZ1 1315 aa27.37■■□□□ 1.97
CACNB1-205ENST00000536613 SLAIN2Q9P270 581 aa27.36■■□□□ 1.97
CACNB1-205ENST00000536613 ROBO1Q9Y6N7 1651 aa27.36■■□□□ 1.97
CACNB1-205ENST00000536613 VGFO15240 615 aaPredicted RBP27.35■■□□□ 1.97
CACNB1-205ENST00000536613 XRN1Q8IZH2 1706 aaKnown RBP27.35■■□□□ 1.97
CACNB1-205ENST00000536613 CCDC144AA2RUR9 1427 aa27.34■■□□□ 1.97
CACNB1-205ENST00000536613 C19orf44Q9H6X5 657 aa27.34■■□□□ 1.97
CACNB1-205ENST00000536613 CADPS2Q86UW7 1296 aa27.3■■□□□ 1.96
CACNB1-205ENST00000536613 ATF3P18847 181 aa27.29■■□□□ 1.96
CACNB1-205ENST00000536613 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.28■■□□□ 1.96
CACNB1-205ENST00000536613 RAB3GAP2Q9H2M9 1393 aa27.28■■□□□ 1.96
CACNB1-205ENST00000536613 SPATA31E1Q6ZUB1 1445 aa27.27■■□□□ 1.96
CACNB1-205ENST00000536613 PPLO60437 1756 aa27.25■■□□□ 1.95
CACNB1-205ENST00000536613 DCCP43146 1447 aa27.24■■□□□ 1.95
CACNB1-205ENST00000536613 SETD1AO15047 1707 aaKnown RBP27.22■■□□□ 1.95
CACNB1-205ENST00000536613 RGL3Q3MIN7 710 aa27.22■■□□□ 1.95
CACNB1-205ENST00000536613 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
CACNB1-205ENST00000536613 PTCH1Q13635 1447 aa27.2■■□□□ 1.94
CACNB1-205ENST00000536613 ADGRL3Q9HAR2 1447 aa27.19■■□□□ 1.94
CACNB1-205ENST00000536613 ANKRD30BQ9BXX2 1392 aa27.19■■□□□ 1.94
CACNB1-205ENST00000536613 ADGRF5Q8IZF2 1346 aa27.18■■□□□ 1.94
CACNB1-205ENST00000536613 PRAG1Q86YV5 1406 aa27.18■■□□□ 1.94
CACNB1-205ENST00000536613 SOCS7O14512 581 aa27.18■■□□□ 1.94
CACNB1-205ENST00000536613 PHLPP1O60346 1717 aa27.17■■□□□ 1.94
CACNB1-205ENST00000536613 ROBO2Q9HCK4 1378 aa27.16■■□□□ 1.94
CACNB1-205ENST00000536613 MST1RQ04912 1400 aa27.15■■□□□ 1.94
CACNB1-205ENST00000536613 BRINP3Q76B58 766 aa27.14■■□□□ 1.94
CACNB1-205ENST00000536613 IFT172Q9UG01 1749 aa27.13■■□□□ 1.93
CACNB1-205ENST00000536613 COL16A1Q07092 1604 aaPredicted RBP27.12■■□□□ 1.93
CACNB1-205ENST00000536613 AHDC1Q5TGY3 1603 aaPredicted RBP27.12■■□□□ 1.93
CACNB1-205ENST00000536613 JCADQ9P266 1359 aa27.12■■□□□ 1.93
CACNB1-205ENST00000536613 NALCNQ8IZF0 1738 aa27.11■■□□□ 1.93
CACNB1-205ENST00000536613 HRCP23327 699 aa27.11■■□□□ 1.93
CACNB1-205ENST00000536613 PIK3C2GO75747 1445 aa27.1■■□□□ 1.93
CACNB1-205ENST00000536613 ASXL1Q8IXJ9 1541 aa27.09■■□□□ 1.93
CACNB1-205ENST00000536613 RGS17Q9UGC6 210 aaPredicted RBP27.04■■□□□ 1.92
CACNB1-205ENST00000536613 TECPR2O15040 1411 aa27.03■■□□□ 1.92
CACNB1-205ENST00000536613 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
CACNB1-205ENST00000536613 MYOM2P54296 1465 aa27.03■■□□□ 1.92
CACNB1-205ENST00000536613 NRXN1Q9ULB1 1477 aa27.02■■□□□ 1.92
CACNB1-205ENST00000536613 C1orf167Q5SNV9 1468 aa27.01■■□□□ 1.91
CACNB1-205ENST00000536613 TMEM132EQ6IEE7 984 aa27.01■■□□□ 1.91
CACNB1-205ENST00000536613 STK26Q9P289 416 aa27.01■■□□□ 1.91
CACNB1-205ENST00000536613 ABCC11Q96J66 1382 aa27■■□□□ 1.91
CACNB1-205ENST00000536613 SPATA31A6Q5VVP1 1343 aa27■■□□□ 1.91
CACNB1-205ENST00000536613 C14orf93Q9H972 538 aaKnown RBP26.99■■□□□ 1.91
CACNB1-205ENST00000536613 NHSL1Q5SYE7 1610 aa26.98■■□□□ 1.91
CACNB1-205ENST00000536613 YTHDC2Q9H6S0 1430 aaKnown RBP26.97■■□□□ 1.91
CACNB1-205ENST00000536613 SHPRHQ149N8 1683 aa26.96■■□□□ 1.91
CACNB1-205ENST00000536613 WAPLQ7Z5K2 1190 aa26.95■■□□□ 1.9
CACNB1-205ENST00000536613 CDC42BPGQ6DT37 1551 aa26.95■■□□□ 1.9
CACNB1-205ENST00000536613 LRP6O75581 1613 aa26.94■■□□□ 1.9
CACNB1-205ENST00000536613 KNDC1Q76NI1 1749 aa26.94■■□□□ 1.9
CACNB1-205ENST00000536613 CFAP70Q5T0N1 1121 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms