RNA–Protein interactions for RNA: ENST00000536563.1

CD4-205, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-205ENST00000536563 RIMS2Q9UQ26 1411 aa22.54■■□□□ 1.2
CD4-205ENST00000536563 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
CD4-205ENST00000536563 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
CD4-205ENST00000536563 SPHKAPQ2M3C7 1700 aa22.53■■□□□ 1.2
CD4-205ENST00000536563 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
CD4-205ENST00000536563 TRPM2O94759 1503 aa22.51■■□□□ 1.19
CD4-205ENST00000536563 FOXD1Q16676 465 aa22.5■■□□□ 1.19
CD4-205ENST00000536563 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
CD4-205ENST00000536563 HRCP23327 699 aa22.48■■□□□ 1.19
CD4-205ENST00000536563 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
CD4-205ENST00000536563 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
CD4-205ENST00000536563 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
CD4-205ENST00000536563 IQSEC2Q5JU85 1478 aa22.46■■□□□ 1.19
CD4-205ENST00000536563 CPS1P31327 1500 aa22.46■■□□□ 1.19
CD4-205ENST00000536563 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
CD4-205ENST00000536563 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.18
CD4-205ENST00000536563 CLTCL1P53675 1640 aa22.43■■□□□ 1.18
CD4-205ENST00000536563 CCDC144AA2RUR9 1427 aa22.41■■□□□ 1.18
CD4-205ENST00000536563 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
CD4-205ENST00000536563 KCNA6P17658 529 aa22.39■■□□□ 1.17
CD4-205ENST00000536563 UBAP1LF5GYI3 381 aa22.38■■□□□ 1.17
CD4-205ENST00000536563 RPGRIP1LQ68CZ1 1315 aa22.37■■□□□ 1.17
CD4-205ENST00000536563 KIF1BO60333 1816 aa22.36■■□□□ 1.17
CD4-205ENST00000536563 VGFO15240 615 aaPredicted RBP22.35■■□□□ 1.17
CD4-205ENST00000536563 LRRC7Q96NW7 1537 aa22.33■■□□□ 1.17
CD4-205ENST00000536563 PROSER2Q86WR7 435 aaPredicted RBP22.33■■□□□ 1.17
CD4-205ENST00000536563 TOM1O60784 492 aa22.32■■□□□ 1.16
CD4-205ENST00000536563 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
CD4-205ENST00000536563 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
CD4-205ENST00000536563 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
CD4-205ENST00000536563 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
CD4-205ENST00000536563 DIP2AQ14689 1571 aa22.29■■□□□ 1.16
CD4-205ENST00000536563 PIK3R4Q99570 1358 aa22.29■■□□□ 1.16
CD4-205ENST00000536563 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.16
CD4-205ENST00000536563 ANKRD30BQ9BXX2 1392 aa22.26■■□□□ 1.15
CD4-205ENST00000536563 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
CD4-205ENST00000536563 NKTRP30414 1462 aaKnown RBP22.26■■□□□ 1.15
CD4-205ENST00000536563 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
CD4-205ENST00000536563 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
CD4-205ENST00000536563 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
CD4-205ENST00000536563 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
CD4-205ENST00000536563 PIP4K2BP78356 416 aa22.23■■□□□ 1.15
CD4-205ENST00000536563 NWD1Q149M9 1564 aa22.23■■□□□ 1.15
CD4-205ENST00000536563 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
CD4-205ENST00000536563 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
CD4-205ENST00000536563 C14orf37Q86TY3 774 aa22.19■■□□□ 1.14
CD4-205ENST00000536563 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
CD4-205ENST00000536563 METP08581 1390 aa22.19■■□□□ 1.14
CD4-205ENST00000536563 NRXN3Q9Y4C0 1643 aa22.19■■□□□ 1.14
CD4-205ENST00000536563 PTPRUQ92729 1446 aa22.17■■□□□ 1.14
CD4-205ENST00000536563 MSH6P52701 1360 aa22.17■■□□□ 1.14
CD4-205ENST00000536563 PPLO60437 1756 aa22.17■■□□□ 1.14
CD4-205ENST00000536563 NCOA3Q9Y6Q9 1424 aa22.15■■□□□ 1.14
CD4-205ENST00000536563 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
CD4-205ENST00000536563 XIRP1Q702N8 1843 aaKnown RBP22.11■■□□□ 1.13
CD4-205ENST00000536563 C19orf44Q9H6X5 657 aa22.11■■□□□ 1.13
CD4-205ENST00000536563 ATF3P18847 181 aa22.09■■□□□ 1.13
CD4-205ENST00000536563 DCAF11Q8TEB1 546 aa22.09■■□□□ 1.13
CD4-205ENST00000536563 STAC3Q96MF2 364 aa22.09■■□□□ 1.13
CD4-205ENST00000536563 KDM2AQ9Y2K7 1162 aa22.09■■□□□ 1.13
CD4-205ENST00000536563 IFT172Q9UG01 1749 aa22.08■■□□□ 1.12
CD4-205ENST00000536563 MYOM2P54296 1465 aa22.08■■□□□ 1.12
CD4-205ENST00000536563 PIK3C2GO75747 1445 aa22.07■■□□□ 1.12
CD4-205ENST00000536563 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
CD4-205ENST00000536563 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
CD4-205ENST00000536563 HSPA1LP34931 641 aa22.06■■□□□ 1.12
CD4-205ENST00000536563 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
CD4-205ENST00000536563 SLAIN2Q9P270 581 aa22.06■■□□□ 1.12
CD4-205ENST00000536563 STK26Q9P289 416 aa22.05■■□□□ 1.12
CD4-205ENST00000536563 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
CD4-205ENST00000536563 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
CD4-205ENST00000536563 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
CD4-205ENST00000536563 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
CD4-205ENST00000536563 PTCH1Q13635 1447 aa22.03■■□□□ 1.12
CD4-205ENST00000536563 FAM135BQ49AJ0 1406 aa22.03■■□□□ 1.12
CD4-205ENST00000536563 SETD1AO15047 1707 aaKnown RBP22.03■■□□□ 1.12
CD4-205ENST00000536563 ROBO2Q9HCK4 1378 aa22.02■■□□□ 1.12
CD4-205ENST00000536563 LRPPRCP42704 1394 aaKnown RBP22.01■■□□□ 1.11
CD4-205ENST00000536563 DHX57Q6P158 1386 aaKnown RBP22■■□□□ 1.11
CD4-205ENST00000536563 PRAG1Q86YV5 1406 aa21.99■■□□□ 1.11
CD4-205ENST00000536563 MED1Q15648 1581 aaPredicted RBP21.99■■□□□ 1.11
CD4-205ENST00000536563 ABCC11Q96J66 1382 aa21.99■■□□□ 1.11
CD4-205ENST00000536563 ADGRL3Q9HAR2 1447 aa21.98■■□□□ 1.11
CD4-205ENST00000536563 DCCP43146 1447 aa21.97■■□□□ 1.11
CD4-205ENST00000536563 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
CD4-205ENST00000536563 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
CD4-205ENST00000536563 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
CD4-205ENST00000536563 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
CD4-205ENST00000536563 SIRT1Q96EB6 747 aa21.95■■□□□ 1.1
CD4-205ENST00000536563 TECPR2O15040 1411 aa21.95■■□□□ 1.1
CD4-205ENST00000536563 LAMC1P11047 1609 aa21.95■■□□□ 1.1
CD4-205ENST00000536563 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
CD4-205ENST00000536563 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
CD4-205ENST00000536563 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
CD4-205ENST00000536563 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
CD4-205ENST00000536563 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
CD4-205ENST00000536563 POGKQ9P215 609 aa21.89■■□□□ 1.09
CD4-205ENST00000536563 BRINP3Q76B58 766 aa21.88■■□□□ 1.09
CD4-205ENST00000536563 MST1RQ04912 1400 aa21.88■■□□□ 1.09
CD4-205ENST00000536563 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms