RNA–Protein interactions for RNA: ENST00000536452.1

CYB561A3-206, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 1,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-206ENST00000536452 STAG3Q9UJ98 1225 aa19■□□□□ 0.63
CYB561A3-206ENST00000536452 CLTCL1P53675 1640 aa18.98■□□□□ 0.63
CYB561A3-206ENST00000536452 FBXO41Q8TF61 875 aa18.97■□□□□ 0.63
CYB561A3-206ENST00000536452 TXNDC2Q86VQ3 553 aa18.97■□□□□ 0.63
CYB561A3-206ENST00000536452 TRPM2O94759 1503 aa18.97■□□□□ 0.63
CYB561A3-206ENST00000536452 ZFYVE9O95405 1425 aa18.96■□□□□ 0.63
CYB561A3-206ENST00000536452 TRIM52Q96A61 297 aa18.95■□□□□ 0.62
CYB561A3-206ENST00000536452 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
CYB561A3-206ENST00000536452 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
CYB561A3-206ENST00000536452 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
CYB561A3-206ENST00000536452 CPS1P31327 1500 aa18.92■□□□□ 0.62
CYB561A3-206ENST00000536452 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
CYB561A3-206ENST00000536452 KIF1BO60333 1816 aa18.92■□□□□ 0.62
CYB561A3-206ENST00000536452 RIMS2Q9UQ26 1411 aa18.92■□□□□ 0.62
CYB561A3-206ENST00000536452 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
CYB561A3-206ENST00000536452 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
CYB561A3-206ENST00000536452 XIRP1Q702N8 1843 aaKnown RBP18.87■□□□□ 0.61
CYB561A3-206ENST00000536452 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
CYB561A3-206ENST00000536452 FOXD1Q16676 465 aa18.86■□□□□ 0.61
CYB561A3-206ENST00000536452 PLEKHG1Q9ULL1 1385 aa18.85■□□□□ 0.61
CYB561A3-206ENST00000536452 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
CYB561A3-206ENST00000536452 NUTM2DQ5VT03 806 aaPredicted RBP18.84■□□□□ 0.61
CYB561A3-206ENST00000536452 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
CYB561A3-206ENST00000536452 LRRC7Q96NW7 1537 aa18.84■□□□□ 0.61
CYB561A3-206ENST00000536452 SLC26A8Q96RN1 970 aa18.84■□□□□ 0.61
CYB561A3-206ENST00000536452 NRXN3Q9Y4C0 1643 aa18.83■□□□□ 0.6
CYB561A3-206ENST00000536452 NWD1Q149M9 1564 aa18.83■□□□□ 0.6
CYB561A3-206ENST00000536452 CHD2O14647 1828 aaKnown RBP18.82■□□□□ 0.6
CYB561A3-206ENST00000536452 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
CYB561A3-206ENST00000536452 TONSLQ96HA7 1378 aa18.81■□□□□ 0.6
CYB561A3-206ENST00000536452 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
CYB561A3-206ENST00000536452 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
CYB561A3-206ENST00000536452 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
CYB561A3-206ENST00000536452 PPLO60437 1756 aa18.79■□□□□ 0.6
CYB561A3-206ENST00000536452 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.79■□□□□ 0.6
CYB561A3-206ENST00000536452 BCANQ96GW7 911 aa18.78■□□□□ 0.6
CYB561A3-206ENST00000536452 SETBP1Q9Y6X0 1596 aa18.78■□□□□ 0.6
CYB561A3-206ENST00000536452 ZNF326Q5BKZ1 582 aaKnown RBP18.77■□□□□ 0.6
CYB561A3-206ENST00000536452 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.59
CYB561A3-206ENST00000536452 MIER1Q8N108 512 aa18.77■□□□□ 0.59
CYB561A3-206ENST00000536452 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
CYB561A3-206ENST00000536452 CCDC144AA2RUR9 1427 aa18.75■□□□□ 0.59
CYB561A3-206ENST00000536452 UBAP1LF5GYI3 381 aa18.75■□□□□ 0.59
CYB561A3-206ENST00000536452 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
CYB561A3-206ENST00000536452 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
CYB561A3-206ENST00000536452 KCNA6P17658 529 aa18.73■□□□□ 0.59
CYB561A3-206ENST00000536452 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
CYB561A3-206ENST00000536452 TBX22Q9Y458 520 aa18.71■□□□□ 0.59
CYB561A3-206ENST00000536452 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
CYB561A3-206ENST00000536452 TMEM94Q12767 1356 aa18.7■□□□□ 0.58
CYB561A3-206ENST00000536452 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
CYB561A3-206ENST00000536452 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
CYB561A3-206ENST00000536452 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
CYB561A3-206ENST00000536452 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
CYB561A3-206ENST00000536452 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
CYB561A3-206ENST00000536452 PROSER2Q86WR7 435 aaPredicted RBP18.65■□□□□ 0.58
CYB561A3-206ENST00000536452 METP08581 1390 aa18.65■□□□□ 0.58
CYB561A3-206ENST00000536452 TOM1O60784 492 aa18.65■□□□□ 0.58
CYB561A3-206ENST00000536452 PIP4K2BP78356 416 aa18.65■□□□□ 0.58
CYB561A3-206ENST00000536452 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
CYB561A3-206ENST00000536452 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
CYB561A3-206ENST00000536452 RGL3Q3MIN7 710 aa18.63■□□□□ 0.57
CYB561A3-206ENST00000536452 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
CYB561A3-206ENST00000536452 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
CYB561A3-206ENST00000536452 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
CYB561A3-206ENST00000536452 ADGRF5Q8IZF2 1346 aa18.59■□□□□ 0.57
CYB561A3-206ENST00000536452 ROBO1Q9Y6N7 1651 aa18.58■□□□□ 0.57
CYB561A3-206ENST00000536452 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.56
CYB561A3-206ENST00000536452 ASXL1Q8IXJ9 1541 aa18.57■□□□□ 0.56
CYB561A3-206ENST00000536452 MSH6P52701 1360 aa18.57■□□□□ 0.56
CYB561A3-206ENST00000536452 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
CYB561A3-206ENST00000536452 L3MBTL2Q969R5 705 aa18.56■□□□□ 0.56
CYB561A3-206ENST00000536452 MYOM2P54296 1465 aa18.56■□□□□ 0.56
CYB561A3-206ENST00000536452 HSPA1LP34931 641 aa18.56■□□□□ 0.56
CYB561A3-206ENST00000536452 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
CYB561A3-206ENST00000536452 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
CYB561A3-206ENST00000536452 PTCH1Q13635 1447 aa18.53■□□□□ 0.56
CYB561A3-206ENST00000536452 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
CYB561A3-206ENST00000536452 LAMC1P11047 1609 aa18.52■□□□□ 0.56
CYB561A3-206ENST00000536452 KNDC1Q76NI1 1749 aa18.52■□□□□ 0.55
CYB561A3-206ENST00000536452 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
CYB561A3-206ENST00000536452 ROBO2Q9HCK4 1378 aa18.51■□□□□ 0.55
CYB561A3-206ENST00000536452 DDX10Q13206 875 aaKnown RBP18.51■□□□□ 0.55
CYB561A3-206ENST00000536452 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
CYB561A3-206ENST00000536452 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
CYB561A3-206ENST00000536452 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
CYB561A3-206ENST00000536452 C19orf44Q9H6X5 657 aa18.48■□□□□ 0.55
CYB561A3-206ENST00000536452 DCCP43146 1447 aa18.48■□□□□ 0.55
CYB561A3-206ENST00000536452 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
CYB561A3-206ENST00000536452 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
CYB561A3-206ENST00000536452 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
CYB561A3-206ENST00000536452 TECPR2O15040 1411 aa18.46■□□□□ 0.55
CYB561A3-206ENST00000536452 PHLPP1O60346 1717 aa18.46■□□□□ 0.54
CYB561A3-206ENST00000536452 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
CYB561A3-206ENST00000536452 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
CYB561A3-206ENST00000536452 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
CYB561A3-206ENST00000536452 MST1RQ04912 1400 aa18.43■□□□□ 0.54
CYB561A3-206ENST00000536452 YTHDC2Q9H6S0 1430 aaKnown RBP18.43■□□□□ 0.54
CYB561A3-206ENST00000536452 ADGRB1O14514 1584 aa18.43■□□□□ 0.54
CYB561A3-206ENST00000536452 ATF3P18847 181 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms