RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TRPM2O94759 1503 aa19.66■□□□□ 0.74
PRKDC-206ENST00000536429 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
PRKDC-206ENST00000536429 RAB3GAP2Q9H2M9 1393 aa19.66■□□□□ 0.74
PRKDC-206ENST00000536429 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
PRKDC-206ENST00000536429 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
PRKDC-206ENST00000536429 CPS1P31327 1500 aa19.65■□□□□ 0.74
PRKDC-206ENST00000536429 CLTCL1P53675 1640 aa19.65■□□□□ 0.74
PRKDC-206ENST00000536429 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.73
PRKDC-206ENST00000536429 STRCP1A6NGW2 1772 aa19.63■□□□□ 0.73
PRKDC-206ENST00000536429 BCANQ96GW7 911 aa19.63■□□□□ 0.73
PRKDC-206ENST00000536429 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
PRKDC-206ENST00000536429 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.61■□□□□ 0.73
PRKDC-206ENST00000536429 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
PRKDC-206ENST00000536429 HDGFP51858 240 aaKnown RBP19.6■□□□□ 0.73
PRKDC-206ENST00000536429 UBAP1LF5GYI3 381 aa19.59■□□□□ 0.73
PRKDC-206ENST00000536429 ADAMTS13Q76LX8 1427 aa19.59■□□□□ 0.73
PRKDC-206ENST00000536429 KCNA6P17658 529 aa19.57■□□□□ 0.72
PRKDC-206ENST00000536429 RBM33Q96EV2 1170 aaKnown RBP19.55■□□□□ 0.72
PRKDC-206ENST00000536429 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
PRKDC-206ENST00000536429 NEXMIFQ5QGS0 1516 aa19.54■□□□□ 0.72
PRKDC-206ENST00000536429 CCDC144AA2RUR9 1427 aa19.52■□□□□ 0.72
PRKDC-206ENST00000536429 TMEM94Q12767 1356 aa19.51■□□□□ 0.71
PRKDC-206ENST00000536429 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
PRKDC-206ENST00000536429 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
PRKDC-206ENST00000536429 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
PRKDC-206ENST00000536429 HRCP23327 699 aa19.49■□□□□ 0.71
PRKDC-206ENST00000536429 PIP4K2BP78356 416 aa19.49■□□□□ 0.71
PRKDC-206ENST00000536429 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
PRKDC-206ENST00000536429 NRXN3Q9Y4C0 1643 aa19.49■□□□□ 0.71
PRKDC-206ENST00000536429 PTPRUQ92729 1446 aa19.49■□□□□ 0.71
PRKDC-206ENST00000536429 TOM1O60784 492 aa19.48■□□□□ 0.71
PRKDC-206ENST00000536429 RGL3Q3MIN7 710 aa19.48■□□□□ 0.71
PRKDC-206ENST00000536429 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
PRKDC-206ENST00000536429 KIF1BO60333 1816 aa19.48■□□□□ 0.71
PRKDC-206ENST00000536429 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
PRKDC-206ENST00000536429 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
PRKDC-206ENST00000536429 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
PRKDC-206ENST00000536429 DIP2AQ14689 1571 aa19.46■□□□□ 0.71
PRKDC-206ENST00000536429 RPGRIP1LQ68CZ1 1315 aa19.46■□□□□ 0.71
PRKDC-206ENST00000536429 METP08581 1390 aa19.45■□□□□ 0.7
PRKDC-206ENST00000536429 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
PRKDC-206ENST00000536429 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
PRKDC-206ENST00000536429 AMOTL2Q9Y2J4 779 aa19.44■□□□□ 0.7
PRKDC-206ENST00000536429 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
PRKDC-206ENST00000536429 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
PRKDC-206ENST00000536429 CHD2O14647 1828 aaKnown RBP19.43■□□□□ 0.7
PRKDC-206ENST00000536429 ADGRF5Q8IZF2 1346 aa19.42■□□□□ 0.7
PRKDC-206ENST00000536429 HSPA1LP34931 641 aa19.39■□□□□ 0.69
PRKDC-206ENST00000536429 PPLO60437 1756 aa19.38■□□□□ 0.69
PRKDC-206ENST00000536429 MSH6P52701 1360 aa19.35■□□□□ 0.69
PRKDC-206ENST00000536429 XRN1Q8IZH2 1706 aaKnown RBP19.35■□□□□ 0.69
PRKDC-206ENST00000536429 SETD1AO15047 1707 aaKnown RBP19.34■□□□□ 0.69
PRKDC-206ENST00000536429 C14orf37Q86TY3 774 aa19.33■□□□□ 0.68
PRKDC-206ENST00000536429 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
PRKDC-206ENST00000536429 PIK3C2GO75747 1445 aa19.32■□□□□ 0.68
PRKDC-206ENST00000536429 IFT172Q9UG01 1749 aa19.31■□□□□ 0.68
PRKDC-206ENST00000536429 ROBO2Q9HCK4 1378 aa19.31■□□□□ 0.68
PRKDC-206ENST00000536429 FAM135BQ49AJ0 1406 aa19.29■□□□□ 0.68
PRKDC-206ENST00000536429 C19orf44Q9H6X5 657 aa19.29■□□□□ 0.68
PRKDC-206ENST00000536429 SLAIN2Q9P270 581 aa19.29■□□□□ 0.68
PRKDC-206ENST00000536429 TMEM132EQ6IEE7 984 aa19.28■□□□□ 0.68
PRKDC-206ENST00000536429 ASXL1Q8IXJ9 1541 aa19.28■□□□□ 0.68
PRKDC-206ENST00000536429 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
PRKDC-206ENST00000536429 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
PRKDC-206ENST00000536429 MYOM2P54296 1465 aa19.27■□□□□ 0.67
PRKDC-206ENST00000536429 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
PRKDC-206ENST00000536429 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
PRKDC-206ENST00000536429 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
PRKDC-206ENST00000536429 STK26Q9P289 416 aa19.26■□□□□ 0.67
PRKDC-206ENST00000536429 ATF3P18847 181 aa19.25■□□□□ 0.67
PRKDC-206ENST00000536429 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
PRKDC-206ENST00000536429 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
PRKDC-206ENST00000536429 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
PRKDC-206ENST00000536429 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
PRKDC-206ENST00000536429 CADPS2Q86UW7 1296 aa19.24■□□□□ 0.67
PRKDC-206ENST00000536429 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
PRKDC-206ENST00000536429 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
PRKDC-206ENST00000536429 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
PRKDC-206ENST00000536429 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
PRKDC-206ENST00000536429 DCCP43146 1447 aa19.21■□□□□ 0.67
PRKDC-206ENST00000536429 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
PRKDC-206ENST00000536429 ABCC11Q96J66 1382 aa19.19■□□□□ 0.66
PRKDC-206ENST00000536429 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
PRKDC-206ENST00000536429 TECPR2O15040 1411 aa19.19■□□□□ 0.66
PRKDC-206ENST00000536429 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
PRKDC-206ENST00000536429 MST1RQ04912 1400 aa19.18■□□□□ 0.66
PRKDC-206ENST00000536429 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
PRKDC-206ENST00000536429 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
PRKDC-206ENST00000536429 BRINP3Q76B58 766 aa19.17■□□□□ 0.66
PRKDC-206ENST00000536429 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
PRKDC-206ENST00000536429 ADGRB1O14514 1584 aa19.14■□□□□ 0.65
PRKDC-206ENST00000536429 C1orf167Q5SNV9 1468 aa19.12■□□□□ 0.65
PRKDC-206ENST00000536429 STAC3Q96MF2 364 aa19.12■□□□□ 0.65
PRKDC-206ENST00000536429 LAMC1P11047 1609 aa19.11■□□□□ 0.65
PRKDC-206ENST00000536429 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
PRKDC-206ENST00000536429 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
PRKDC-206ENST00000536429 KNDC1Q76NI1 1749 aa19.11■□□□□ 0.65
PRKDC-206ENST00000536429 SAFB2Q14151 953 aaKnown RBP eCLIP19.1■□□□□ 0.65
PRKDC-206ENST00000536429 SIRT1Q96EB6 747 aa19.1■□□□□ 0.65
PRKDC-206ENST00000536429 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms