RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 PPP1R15AO75807 674 aaPredicted RBP32.92■■■□□ 2.86
VPS37C-202ENST00000535818 ZFYVE9O95405 1425 aa32.92■■■□□ 2.86
VPS37C-202ENST00000535818 KIF1BO60333 1816 aa32.88■■■□□ 2.85
VPS37C-202ENST00000535818 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.88■■■□□ 2.85
VPS37C-202ENST00000535818 ZNF326Q5BKZ1 582 aaKnown RBP32.87■■■□□ 2.85
VPS37C-202ENST00000535818 BCANQ96GW7 911 aa32.87■■■□□ 2.85
VPS37C-202ENST00000535818 HRCP23327 699 aa32.84■■■□□ 2.85
VPS37C-202ENST00000535818 NUTM2DQ5VT03 806 aaPredicted RBP32.83■■■□□ 2.85
VPS37C-202ENST00000535818 PLEKHG1Q9ULL1 1385 aa32.83■■■□□ 2.85
VPS37C-202ENST00000535818 SENP3Q9H4L4 574 aaPredicted RBP32.82■■■□□ 2.84
VPS37C-202ENST00000535818 CCDC144AA2RUR9 1427 aa32.82■■■□□ 2.84
VPS37C-202ENST00000535818 CPS1P31327 1500 aa32.81■■■□□ 2.84
VPS37C-202ENST00000535818 FBXO41Q8TF61 875 aa32.78■■■□□ 2.84
VPS37C-202ENST00000535818 SLC26A8Q96RN1 970 aa32.78■■■□□ 2.84
VPS37C-202ENST00000535818 IQSEC2Q5JU85 1478 aa32.76■■■□□ 2.84
VPS37C-202ENST00000535818 ILDR1Q86SU0 546 aaPredicted RBP32.75■■■□□ 2.83
VPS37C-202ENST00000535818 NEXMIFQ5QGS0 1516 aa32.72■■■□□ 2.83
VPS37C-202ENST00000535818 STRCP1A6NGW2 1772 aa32.72■■■□□ 2.83
VPS37C-202ENST00000535818 DIP2AQ14689 1571 aa32.67■■■□□ 2.82
VPS37C-202ENST00000535818 TRIM26Q12899 539 aaPredicted RBP32.67■■■□□ 2.82
VPS37C-202ENST00000535818 RPGRIP1LQ68CZ1 1315 aa32.65■■■□□ 2.82
VPS37C-202ENST00000535818 ADAMTS13Q76LX8 1427 aa32.64■■■□□ 2.82
VPS37C-202ENST00000535818 TBX22Q9Y458 520 aa32.64■■■□□ 2.82
VPS37C-202ENST00000535818 KCNA6P17658 529 aa32.63■■■□□ 2.81
VPS37C-202ENST00000535818 RGL3Q3MIN7 710 aa32.62■■■□□ 2.81
VPS37C-202ENST00000535818 SETBP1Q9Y6X0 1596 aa32.62■■■□□ 2.81
VPS37C-202ENST00000535818 LRRC7Q96NW7 1537 aa32.61■■■□□ 2.81
VPS37C-202ENST00000535818 VGFO15240 615 aaPredicted RBP32.61■■■□□ 2.81
VPS37C-202ENST00000535818 SPATA31E1Q6ZUB1 1445 aa32.6■■■□□ 2.81
VPS37C-202ENST00000535818 PPLO60437 1756 aa32.6■■■□□ 2.81
VPS37C-202ENST00000535818 NWD1Q149M9 1564 aa32.6■■■□□ 2.81
VPS37C-202ENST00000535818 ANKRD30BQ9BXX2 1392 aa32.59■■■□□ 2.81
VPS37C-202ENST00000535818 NRXN3Q9Y4C0 1643 aa32.59■■■□□ 2.81
VPS37C-202ENST00000535818 CHD2O14647 1828 aaKnown RBP32.56■■■□□ 2.8
VPS37C-202ENST00000535818 NKTRP30414 1462 aaKnown RBP32.55■■■□□ 2.8
VPS37C-202ENST00000535818 UBAP1LF5GYI3 381 aa32.55■■■□□ 2.8
VPS37C-202ENST00000535818 PIK3R4Q99570 1358 aa32.55■■■□□ 2.8
VPS37C-202ENST00000535818 PROSER2Q86WR7 435 aaPredicted RBP32.52■■■□□ 2.8
VPS37C-202ENST00000535818 IFT172Q9UG01 1749 aa32.51■■■□□ 2.8
VPS37C-202ENST00000535818 TMEM94Q12767 1356 aa32.48■■■□□ 2.79
VPS37C-202ENST00000535818 TOM1O60784 492 aa32.47■■■□□ 2.79
VPS37C-202ENST00000535818 XIRP1Q702N8 1843 aaKnown RBP32.47■■■□□ 2.79
VPS37C-202ENST00000535818 ADGRF5Q8IZF2 1346 aa32.45■■■□□ 2.78
VPS37C-202ENST00000535818 METP08581 1390 aa32.45■■■□□ 2.78
VPS37C-202ENST00000535818 AMOTL2Q9Y2J4 779 aa32.44■■■□□ 2.78
VPS37C-202ENST00000535818 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
VPS37C-202ENST00000535818 PTPRUQ92729 1446 aa32.43■■■□□ 2.78
VPS37C-202ENST00000535818 RBM33Q96EV2 1170 aaKnown RBP32.43■■■□□ 2.78
VPS37C-202ENST00000535818 SCAF1Q9H7N4 1312 aaKnown RBP32.41■■■□□ 2.78
VPS37C-202ENST00000535818 SETD1AO15047 1707 aaKnown RBP32.4■■■□□ 2.78
VPS37C-202ENST00000535818 XRN1Q8IZH2 1706 aaKnown RBP32.4■■■□□ 2.78
VPS37C-202ENST00000535818 MYOM2P54296 1465 aa32.37■■■□□ 2.77
VPS37C-202ENST00000535818 PIP4K2BP78356 416 aa32.37■■■□□ 2.77
VPS37C-202ENST00000535818 PIK3C2GO75747 1445 aa32.35■■■□□ 2.77
VPS37C-202ENST00000535818 C14orf37Q86TY3 774 aa32.35■■■□□ 2.77
VPS37C-202ENST00000535818 MSH6P52701 1360 aa32.34■■■□□ 2.77
VPS37C-202ENST00000535818 NCOA3Q9Y6Q9 1424 aa32.32■■■□□ 2.76
VPS37C-202ENST00000535818 DHX57Q6P158 1386 aaKnown RBP32.3■■■□□ 2.76
VPS37C-202ENST00000535818 NRXN1Q9ULB1 1477 aa32.29■■■□□ 2.76
VPS37C-202ENST00000535818 DCAF11Q8TEB1 546 aa32.29■■■□□ 2.76
VPS37C-202ENST00000535818 KDM2AQ9Y2K7 1162 aa32.29■■■□□ 2.76
VPS37C-202ENST00000535818 LAMC1P11047 1609 aa32.26■■■□□ 2.75
VPS37C-202ENST00000535818 PTCH1Q13635 1447 aa32.24■■■□□ 2.75
VPS37C-202ENST00000535818 STAC3Q96MF2 364 aa32.23■■■□□ 2.75
VPS37C-202ENST00000535818 ASXL1Q8IXJ9 1541 aa32.21■■■□□ 2.75
VPS37C-202ENST00000535818 C14orf93Q9H972 538 aaKnown RBP32.21■■■□□ 2.75
VPS37C-202ENST00000535818 CFAP70Q5T0N1 1121 aa32.2■■■□□ 2.75
VPS37C-202ENST00000535818 TMEM132EQ6IEE7 984 aa32.2■■■□□ 2.75
VPS37C-202ENST00000535818 C19orf44Q9H6X5 657 aa32.2■■■□□ 2.75
VPS37C-202ENST00000535818 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.2■■■□□ 2.74
VPS37C-202ENST00000535818 PRAG1Q86YV5 1406 aa32.19■■■□□ 2.74
VPS37C-202ENST00000535818 STK26Q9P289 416 aa32.19■■■□□ 2.74
VPS37C-202ENST00000535818 ROBO2Q9HCK4 1378 aa32.19■■■□□ 2.74
VPS37C-202ENST00000535818 ATF3P18847 181 aa32.18■■■□□ 2.74
VPS37C-202ENST00000535818 SIN3AQ96ST3 1273 aa32.18■■■□□ 2.74
VPS37C-202ENST00000535818 LRPPRCP42704 1394 aaKnown RBP32.18■■■□□ 2.74
VPS37C-202ENST00000535818 PCGF6Q9BYE7 350 aa32.17■■■□□ 2.74
VPS37C-202ENST00000535818 NEUROD1Q13562 356 aa32.16■■■□□ 2.74
VPS37C-202ENST00000535818 CADPS2Q86UW7 1296 aa32.16■■■□□ 2.74
VPS37C-202ENST00000535818 YTHDC2Q9H6S0 1430 aaKnown RBP32.15■■■□□ 2.74
VPS37C-202ENST00000535818 ADGRL3Q9HAR2 1447 aa32.15■■■□□ 2.74
VPS37C-202ENST00000535818 KNDC1Q76NI1 1749 aa32.14■■■□□ 2.74
VPS37C-202ENST00000535818 DCCP43146 1447 aa32.13■■■□□ 2.73
VPS37C-202ENST00000535818 NALCNQ8IZF0 1738 aa32.13■■■□□ 2.73
VPS37C-202ENST00000535818 HSPA1LP34931 641 aa32.12■■■□□ 2.73
VPS37C-202ENST00000535818 SLAIN2Q9P270 581 aa32.12■■■□□ 2.73
VPS37C-202ENST00000535818 TECPR2O15040 1411 aa32.11■■■□□ 2.73
VPS37C-202ENST00000535818 FAM135BQ49AJ0 1406 aa32.11■■■□□ 2.73
VPS37C-202ENST00000535818 ABCC11Q96J66 1382 aa32.11■■■□□ 2.73
VPS37C-202ENST00000535818 ROBO1Q9Y6N7 1651 aa32.1■■■□□ 2.73
VPS37C-202ENST00000535818 ADGRB1O14514 1584 aa32.05■■■□□ 2.72
VPS37C-202ENST00000535818 L3MBTL2Q969R5 705 aa32.04■■■□□ 2.72
VPS37C-202ENST00000535818 WAPLQ7Z5K2 1190 aa32.03■■■□□ 2.72
VPS37C-202ENST00000535818 PLEKHH1Q9ULM0 1364 aa32■■■□□ 2.71
VPS37C-202ENST00000535818 MST1RQ04912 1400 aa32■■■□□ 2.71
VPS37C-202ENST00000535818 SIRT1Q96EB6 747 aa31.99■■■□□ 2.71
VPS37C-202ENST00000535818 KIAA1210Q9ULL0 1709 aa31.98■■■□□ 2.71
VPS37C-202ENST00000535818 DLC1Q96QB1 1528 aa31.97■■■□□ 2.71
VPS37C-202ENST00000535818 TRAK1Q9UPV9 953 aa31.97■■■□□ 2.71
VPS37C-202ENST00000535818 CDC42BPGQ6DT37 1551 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms