RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 RIMS2Q9UQ26 1411 aa32.6■■■□□ 2.81
GSDMD-216ENST00000534602 MYO5BQ9ULV0 1848 aa32.59■■■□□ 2.81
GSDMD-216ENST00000534602 PLEKHG1Q9ULL1 1385 aa32.58■■■□□ 2.81
GSDMD-216ENST00000534602 HSPA1LP34931 641 aa32.57■■■□□ 2.8
GSDMD-216ENST00000534602 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.56■■■□□ 2.8
GSDMD-216ENST00000534602 NAIPQ13075 1403 aa32.55■■■□□ 2.8
GSDMD-216ENST00000534602 PPP1R15AO75807 674 aaPredicted RBP32.54■■■□□ 2.8
GSDMD-216ENST00000534602 CHGAP10645 457 aaKnown RBP32.54■■■□□ 2.8
GSDMD-216ENST00000534602 BCANQ96GW7 911 aa32.54■■■□□ 2.8
GSDMD-216ENST00000534602 XIRP1Q702N8 1843 aaKnown RBP32.52■■■□□ 2.8
GSDMD-216ENST00000534602 NWD1Q149M9 1564 aa32.49■■■□□ 2.79
GSDMD-216ENST00000534602 NKTRP30414 1462 aaKnown RBP32.49■■■□□ 2.79
GSDMD-216ENST00000534602 TMEM94Q12767 1356 aa32.48■■■□□ 2.79
GSDMD-216ENST00000534602 TBX22Q9Y458 520 aa32.48■■■□□ 2.79
GSDMD-216ENST00000534602 HFM1A2PYH4 1435 aa32.47■■■□□ 2.79
GSDMD-216ENST00000534602 PROSER2Q86WR7 435 aaPredicted RBP32.46■■■□□ 2.79
GSDMD-216ENST00000534602 SPHKAPQ2M3C7 1700 aa32.46■■■□□ 2.79
GSDMD-216ENST00000534602 CHD2O14647 1828 aaKnown RBP32.4■■■□□ 2.78
GSDMD-216ENST00000534602 DIP2AQ14689 1571 aa32.4■■■□□ 2.78
GSDMD-216ENST00000534602 ADAMTS13Q76LX8 1427 aa32.39■■■□□ 2.78
GSDMD-216ENST00000534602 PIK3R4Q99570 1358 aa32.38■■■□□ 2.77
GSDMD-216ENST00000534602 ILDR2Q71H61 639 aa32.38■■■□□ 2.77
GSDMD-216ENST00000534602 NUTM2DQ5VT03 806 aaPredicted RBP32.37■■■□□ 2.77
GSDMD-216ENST00000534602 SENP3Q9H4L4 574 aaPredicted RBP32.37■■■□□ 2.77
GSDMD-216ENST00000534602 TRPM2O94759 1503 aa32.36■■■□□ 2.77
GSDMD-216ENST00000534602 FAM135BQ49AJ0 1406 aa32.35■■■□□ 2.77
GSDMD-216ENST00000534602 TRIM52Q96A61 297 aa32.33■■■□□ 2.77
GSDMD-216ENST00000534602 RBM33Q96EV2 1170 aaKnown RBP32.32■■■□□ 2.76
GSDMD-216ENST00000534602 NCOA3Q9Y6Q9 1424 aa32.32■■■□□ 2.76
GSDMD-216ENST00000534602 MSH6P52701 1360 aa32.32■■■□□ 2.76
GSDMD-216ENST00000534602 CLTCL1P53675 1640 aa32.29■■■□□ 2.76
GSDMD-216ENST00000534602 MED1Q15648 1581 aaPredicted RBP32.29■■■□□ 2.76
GSDMD-216ENST00000534602 ZNF326Q5BKZ1 582 aaKnown RBP32.29■■■□□ 2.76
GSDMD-216ENST00000534602 SLC4A1APQ9BWU0 796 aaKnown RBP32.26■■■□□ 2.75
GSDMD-216ENST00000534602 SETBP1Q9Y6X0 1596 aa32.26■■■□□ 2.75
GSDMD-216ENST00000534602 KIF1BO60333 1816 aa32.22■■■□□ 2.75
GSDMD-216ENST00000534602 NRXN3Q9Y4C0 1643 aa32.22■■■□□ 2.75
GSDMD-216ENST00000534602 SLAIN2Q9P270 581 aa32.21■■■□□ 2.75
GSDMD-216ENST00000534602 NEXMIFQ5QGS0 1516 aa32.21■■■□□ 2.75
GSDMD-216ENST00000534602 SOCS7O14512 581 aa32.2■■■□□ 2.75
GSDMD-216ENST00000534602 AMOTL2Q9Y2J4 779 aa32.2■■■□□ 2.75
GSDMD-216ENST00000534602 ROBO1Q9Y6N7 1651 aa32.2■■■□□ 2.74
GSDMD-216ENST00000534602 PTPRUQ92729 1446 aa32.17■■■□□ 2.74
GSDMD-216ENST00000534602 C19orf44Q9H6X5 657 aa32.16■■■□□ 2.74
GSDMD-216ENST00000534602 C14orf37Q86TY3 774 aa32.15■■■□□ 2.74
GSDMD-216ENST00000534602 ACIN1Q9UKV3 1341 aaKnown RBP32.14■■■□□ 2.74
GSDMD-216ENST00000534602 RPGRIP1LQ68CZ1 1315 aa32.13■■■□□ 2.73
GSDMD-216ENST00000534602 CADPS2Q86UW7 1296 aa32.13■■■□□ 2.73
GSDMD-216ENST00000534602 VGFO15240 615 aaPredicted RBP32.12■■■□□ 2.73
GSDMD-216ENST00000534602 XRN1Q8IZH2 1706 aaKnown RBP32.12■■■□□ 2.73
GSDMD-216ENST00000534602 METP08581 1390 aa32.11■■■□□ 2.73
GSDMD-216ENST00000534602 PHF23Q9BUL5 403 aaPredicted RBP32.09■■■□□ 2.73
GSDMD-216ENST00000534602 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.09■■■□□ 2.73
GSDMD-216ENST00000534602 ATF3P18847 181 aa32.08■■■□□ 2.73
GSDMD-216ENST00000534602 MPHOSPH9Q99550 1183 aa32.06■■■□□ 2.72
GSDMD-216ENST00000534602 DCCP43146 1447 aa32.05■■■□□ 2.72
GSDMD-216ENST00000534602 FOXD1Q16676 465 aa32.03■■■□□ 2.72
GSDMD-216ENST00000534602 CCDC144AA2RUR9 1427 aa32.01■■■□□ 2.72
GSDMD-216ENST00000534602 PHLPP1O60346 1717 aa32■■■□□ 2.71
GSDMD-216ENST00000534602 SETD5Q9C0A6 1442 aa32■■■□□ 2.71
GSDMD-216ENST00000534602 PPLO60437 1756 aa31.99■■■□□ 2.71
GSDMD-216ENST00000534602 SETD1AO15047 1707 aaKnown RBP31.95■■■□□ 2.71
GSDMD-216ENST00000534602 JCADQ9P266 1359 aa31.94■■■□□ 2.7
GSDMD-216ENST00000534602 SPATA31E1Q6ZUB1 1445 aa31.93■■■□□ 2.7
GSDMD-216ENST00000534602 PRAG1Q86YV5 1406 aa31.93■■■□□ 2.7
GSDMD-216ENST00000534602 ADGRL3Q9HAR2 1447 aa31.93■■■□□ 2.7
GSDMD-216ENST00000534602 COL16A1Q07092 1604 aaPredicted RBP31.93■■■□□ 2.7
GSDMD-216ENST00000534602 AHDC1Q5TGY3 1603 aaPredicted RBP31.93■■■□□ 2.7
GSDMD-216ENST00000534602 PTCH1Q13635 1447 aa31.92■■■□□ 2.7
GSDMD-216ENST00000534602 BRINP3Q76B58 766 aa31.9■■■□□ 2.7
GSDMD-216ENST00000534602 ANKRD30BQ9BXX2 1392 aa31.89■■■□□ 2.7
GSDMD-216ENST00000534602 MST1RQ04912 1400 aa31.89■■■□□ 2.7
GSDMD-216ENST00000534602 RGS17Q9UGC6 210 aaPredicted RBP31.88■■■□□ 2.69
GSDMD-216ENST00000534602 RGL3Q3MIN7 710 aa31.86■■■□□ 2.69
GSDMD-216ENST00000534602 RAB3GAP2Q9H2M9 1393 aa31.85■■■□□ 2.69
GSDMD-216ENST00000534602 ROBO2Q9HCK4 1378 aa31.84■■■□□ 2.69
GSDMD-216ENST00000534602 NALCNQ8IZF0 1738 aa31.84■■■□□ 2.69
GSDMD-216ENST00000534602 ADGRF5Q8IZF2 1346 aa31.84■■■□□ 2.69
GSDMD-216ENST00000534602 ASXL1Q8IXJ9 1541 aa31.83■■■□□ 2.69
GSDMD-216ENST00000534602 SPATA31A6Q5VVP1 1343 aa31.82■■■□□ 2.68
GSDMD-216ENST00000534602 IFT172Q9UG01 1749 aa31.82■■■□□ 2.68
GSDMD-216ENST00000534602 SHPRHQ149N8 1683 aa31.76■■■□□ 2.68
GSDMD-216ENST00000534602 HRCP23327 699 aa31.75■■■□□ 2.67
GSDMD-216ENST00000534602 NHSL1Q5SYE7 1610 aa31.75■■■□□ 2.67
GSDMD-216ENST00000534602 PIK3C2GO75747 1445 aa31.75■■■□□ 2.67
GSDMD-216ENST00000534602 C1orf167Q5SNV9 1468 aa31.74■■■□□ 2.67
GSDMD-216ENST00000534602 TECPR2O15040 1411 aa31.73■■■□□ 2.67
GSDMD-216ENST00000534602 LRPPRCP42704 1394 aaKnown RBP31.71■■■□□ 2.67
GSDMD-216ENST00000534602 LRRC59Q96AG4 307 aaKnown RBP31.7■■■□□ 2.67
GSDMD-216ENST00000534602 ABCC11Q96J66 1382 aa31.69■■■□□ 2.66
GSDMD-216ENST00000534602 POTEAQ6S8J7 498 aa31.69■■■□□ 2.66
GSDMD-216ENST00000534602 LRP6O75581 1613 aa31.68■■■□□ 2.66
GSDMD-216ENST00000534602 MYOM2P54296 1465 aa31.66■■■□□ 2.66
GSDMD-216ENST00000534602 NRXN1Q9ULB1 1477 aa31.66■■■□□ 2.66
GSDMD-216ENST00000534602 LAMC1P11047 1609 aa31.65■■■□□ 2.66
GSDMD-216ENST00000534602 C14orf93Q9H972 538 aaKnown RBP31.65■■■□□ 2.66
GSDMD-216ENST00000534602 TMEM132EQ6IEE7 984 aa31.64■■■□□ 2.66
GSDMD-216ENST00000534602 STK26Q9P289 416 aa31.64■■■□□ 2.66
GSDMD-216ENST00000534602 CDC42BPGQ6DT37 1551 aa31.64■■■□□ 2.65
GSDMD-216ENST00000534602 MEX3CQ5U5Q3 659 aaKnown RBP31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms