RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 SLC26A8Q96RN1 970 aa32.04■■■□□ 2.72
LMNB2-206ENST00000534495 PLEKHG1Q9ULL1 1385 aa32.04■■■□□ 2.72
LMNB2-206ENST00000534495 TRPM2O94759 1503 aa32.03■■■□□ 2.72
LMNB2-206ENST00000534495 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.01■■■□□ 2.71
LMNB2-206ENST00000534495 CLTCL1P53675 1640 aa32■■■□□ 2.71
LMNB2-206ENST00000534495 PPP1R15AO75807 674 aaPredicted RBP32■■■□□ 2.71
LMNB2-206ENST00000534495 XIRP1Q702N8 1843 aaKnown RBP31.99■■■□□ 2.71
LMNB2-206ENST00000534495 SLC4A1APQ9BWU0 796 aaKnown RBP31.98■■■□□ 2.71
LMNB2-206ENST00000534495 BCANQ96GW7 911 aa31.97■■■□□ 2.71
LMNB2-206ENST00000534495 TOM1O60784 492 aa31.96■■■□□ 2.71
LMNB2-206ENST00000534495 KCNA6P17658 529 aa31.96■■■□□ 2.71
LMNB2-206ENST00000534495 ALKQ9UM73 1620 aa31.95■■■□□ 2.71
LMNB2-206ENST00000534495 KIF1BO60333 1816 aa31.95■■■□□ 2.7
LMNB2-206ENST00000534495 NUTM2DQ5VT03 806 aaPredicted RBP31.94■■■□□ 2.7
LMNB2-206ENST00000534495 CHD2O14647 1828 aaKnown RBP31.93■■■□□ 2.7
LMNB2-206ENST00000534495 SENP3Q9H4L4 574 aaPredicted RBP31.93■■■□□ 2.7
LMNB2-206ENST00000534495 NWD1Q149M9 1564 aa31.93■■■□□ 2.7
LMNB2-206ENST00000534495 TBX22Q9Y458 520 aa31.9■■■□□ 2.7
LMNB2-206ENST00000534495 ADAMTS13Q76LX8 1427 aa31.9■■■□□ 2.7
LMNB2-206ENST00000534495 DIP2AQ14689 1571 aa31.88■■■□□ 2.69
LMNB2-206ENST00000534495 NKTRP30414 1462 aaKnown RBP31.87■■■□□ 2.69
LMNB2-206ENST00000534495 SETD5Q9C0A6 1442 aa31.87■■■□□ 2.69
LMNB2-206ENST00000534495 PIP4K2BP78356 416 aa31.86■■■□□ 2.69
LMNB2-206ENST00000534495 ZNF326Q5BKZ1 582 aaKnown RBP31.86■■■□□ 2.69
LMNB2-206ENST00000534495 TMEM94Q12767 1356 aa31.84■■■□□ 2.69
LMNB2-206ENST00000534495 NEXMIFQ5QGS0 1516 aa31.84■■■□□ 2.69
LMNB2-206ENST00000534495 SCAF1Q9H7N4 1312 aaKnown RBP31.83■■■□□ 2.69
LMNB2-206ENST00000534495 MPHOSPH9Q99550 1183 aa31.83■■■□□ 2.69
LMNB2-206ENST00000534495 ACIN1Q9UKV3 1341 aaKnown RBP31.82■■■□□ 2.68
LMNB2-206ENST00000534495 FOXD1Q16676 465 aa31.82■■■□□ 2.68
LMNB2-206ENST00000534495 PROSER2Q86WR7 435 aaPredicted RBP31.82■■■□□ 2.68
LMNB2-206ENST00000534495 NRXN3Q9Y4C0 1643 aa31.82■■■□□ 2.68
LMNB2-206ENST00000534495 SETBP1Q9Y6X0 1596 aa31.8■■■□□ 2.68
LMNB2-206ENST00000534495 PIK3R4Q99570 1358 aa31.8■■■□□ 2.68
LMNB2-206ENST00000534495 RBM33Q96EV2 1170 aaKnown RBP31.76■■■□□ 2.67
LMNB2-206ENST00000534495 RAB3GAP2Q9H2M9 1393 aa31.75■■■□□ 2.67
LMNB2-206ENST00000534495 HSPA1LP34931 641 aa31.74■■■□□ 2.67
LMNB2-206ENST00000534495 PPLO60437 1756 aa31.71■■■□□ 2.67
LMNB2-206ENST00000534495 CCDC144AA2RUR9 1427 aa31.7■■■□□ 2.67
LMNB2-206ENST00000534495 PTPRUQ92729 1446 aa31.7■■■□□ 2.67
LMNB2-206ENST00000534495 RPGRIP1LQ68CZ1 1315 aa31.7■■■□□ 2.66
LMNB2-206ENST00000534495 NCOA3Q9Y6Q9 1424 aa31.66■■■□□ 2.66
LMNB2-206ENST00000534495 VGFO15240 615 aaPredicted RBP31.66■■■□□ 2.66
LMNB2-206ENST00000534495 AMOTL2Q9Y2J4 779 aa31.66■■■□□ 2.66
LMNB2-206ENST00000534495 MSH6P52701 1360 aa31.66■■■□□ 2.66
LMNB2-206ENST00000534495 XRN1Q8IZH2 1706 aaKnown RBP31.66■■■□□ 2.66
LMNB2-206ENST00000534495 METP08581 1390 aa31.64■■■□□ 2.66
LMNB2-206ENST00000534495 SPATA31E1Q6ZUB1 1445 aa31.63■■■□□ 2.65
LMNB2-206ENST00000534495 SETD1AO15047 1707 aaKnown RBP31.62■■■□□ 2.65
LMNB2-206ENST00000534495 FAM135BQ49AJ0 1406 aa31.61■■■□□ 2.65
LMNB2-206ENST00000534495 HRCP23327 699 aa31.59■■■□□ 2.65
LMNB2-206ENST00000534495 IFT172Q9UG01 1749 aa31.58■■■□□ 2.65
LMNB2-206ENST00000534495 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.57■■■□□ 2.64
LMNB2-206ENST00000534495 ROBO1Q9Y6N7 1651 aa31.57■■■□□ 2.64
LMNB2-206ENST00000534495 DISP3Q9P2K9 1392 aa31.56■■■□□ 2.64
LMNB2-206ENST00000534495 RGL3Q3MIN7 710 aa31.55■■■□□ 2.64
LMNB2-206ENST00000534495 C14orf37Q86TY3 774 aa31.53■■■□□ 2.64
LMNB2-206ENST00000534495 C19orf44Q9H6X5 657 aa31.53■■■□□ 2.64
LMNB2-206ENST00000534495 SLAIN2Q9P270 581 aa31.53■■■□□ 2.64
LMNB2-206ENST00000534495 ANKRD30BQ9BXX2 1392 aa31.51■■■□□ 2.63
LMNB2-206ENST00000534495 ADGRF5Q8IZF2 1346 aa31.49■■■□□ 2.63
LMNB2-206ENST00000534495 CADPS2Q86UW7 1296 aa31.47■■■□□ 2.63
LMNB2-206ENST00000534495 DCCP43146 1447 aa31.44■■■□□ 2.62
LMNB2-206ENST00000534495 PRAG1Q86YV5 1406 aa31.44■■■□□ 2.62
LMNB2-206ENST00000534495 ATF3P18847 181 aa31.44■■■□□ 2.62
LMNB2-206ENST00000534495 MED1Q15648 1581 aaPredicted RBP31.43■■■□□ 2.62
LMNB2-206ENST00000534495 PTCH1Q13635 1447 aa31.43■■■□□ 2.62
LMNB2-206ENST00000534495 NALCNQ8IZF0 1738 aa31.41■■■□□ 2.62
LMNB2-206ENST00000534495 PIK3C2GO75747 1445 aa31.4■■■□□ 2.62
LMNB2-206ENST00000534495 ADGRL3Q9HAR2 1447 aa31.4■■■□□ 2.62
LMNB2-206ENST00000534495 ROBO2Q9HCK4 1378 aa31.39■■■□□ 2.62
LMNB2-206ENST00000534495 PHLPP1O60346 1717 aa31.37■■■□□ 2.61
LMNB2-206ENST00000534495 MYOM2P54296 1465 aa31.35■■■□□ 2.61
LMNB2-206ENST00000534495 NRXN1Q9ULB1 1477 aa31.35■■■□□ 2.61
LMNB2-206ENST00000534495 ASXL1Q8IXJ9 1541 aa31.33■■■□□ 2.61
LMNB2-206ENST00000534495 MST1RQ04912 1400 aa31.32■■■□□ 2.61
LMNB2-206ENST00000534495 ILDR2Q71H61 639 aa31.31■■■□□ 2.6
LMNB2-206ENST00000534495 COL16A1Q07092 1604 aaPredicted RBP31.29■■■□□ 2.6
LMNB2-206ENST00000534495 AHDC1Q5TGY3 1603 aaPredicted RBP31.29■■■□□ 2.6
LMNB2-206ENST00000534495 TECPR2O15040 1411 aa31.29■■■□□ 2.6
LMNB2-206ENST00000534495 BRINP3Q76B58 766 aa31.28■■■□□ 2.6
LMNB2-206ENST00000534495 KNDC1Q76NI1 1749 aa31.28■■■□□ 2.6
LMNB2-206ENST00000534495 LRPPRCP42704 1394 aaKnown RBP31.28■■■□□ 2.6
LMNB2-206ENST00000534495 LAMC1P11047 1609 aa31.27■■■□□ 2.6
LMNB2-206ENST00000534495 TMEM132EQ6IEE7 984 aa31.27■■■□□ 2.6
LMNB2-206ENST00000534495 C14orf93Q9H972 538 aaKnown RBP31.27■■■□□ 2.6
LMNB2-206ENST00000534495 ABCC11Q96J66 1382 aa31.25■■■□□ 2.59
LMNB2-206ENST00000534495 STK26Q9P289 416 aa31.24■■■□□ 2.59
LMNB2-206ENST00000534495 YTHDC2Q9H6S0 1430 aaKnown RBP31.23■■■□□ 2.59
LMNB2-206ENST00000534495 CFAP70Q5T0N1 1121 aa31.22■■■□□ 2.59
LMNB2-206ENST00000534495 JCADQ9P266 1359 aa31.19■■■□□ 2.58
LMNB2-206ENST00000534495 NHSL1Q5SYE7 1610 aa31.19■■■□□ 2.58
LMNB2-206ENST00000534495 C1orf167Q5SNV9 1468 aa31.19■■■□□ 2.58
LMNB2-206ENST00000534495 WAPLQ7Z5K2 1190 aa31.18■■■□□ 2.58
LMNB2-206ENST00000534495 DCAF11Q8TEB1 546 aa31.18■■■□□ 2.58
LMNB2-206ENST00000534495 STAC3Q96MF2 364 aa31.17■■■□□ 2.58
LMNB2-206ENST00000534495 CDC42BPGQ6DT37 1551 aa31.17■■■□□ 2.58
LMNB2-206ENST00000534495 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
LMNB2-206ENST00000534495 PHF23Q9BUL5 403 aaPredicted RBP31.15■■■□□ 2.58
LMNB2-206ENST00000534495 KDM2AQ9Y2K7 1162 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms