RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 HRCP23327 699 aa19.8■□□□□ 0.76
CMTM1-219ENST00000533953 TRPM2O94759 1503 aa19.8■□□□□ 0.76
CMTM1-219ENST00000533953 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
CMTM1-219ENST00000533953 LTBP4Q8N2S1 1624 aa19.79■□□□□ 0.76
CMTM1-219ENST00000533953 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
CMTM1-219ENST00000533953 HDGFP51858 240 aaKnown RBP19.77■□□□□ 0.76
CMTM1-219ENST00000533953 RGL3Q3MIN7 710 aa19.77■□□□□ 0.76
CMTM1-219ENST00000533953 ILDR1Q86SU0 546 aaPredicted RBP19.77■□□□□ 0.76
CMTM1-219ENST00000533953 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
CMTM1-219ENST00000533953 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
CMTM1-219ENST00000533953 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
CMTM1-219ENST00000533953 IQGAP1P46940 1657 aa19.75■□□□□ 0.75
CMTM1-219ENST00000533953 CCDC144AA2RUR9 1427 aa19.73■□□□□ 0.75
CMTM1-219ENST00000533953 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
CMTM1-219ENST00000533953 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
CMTM1-219ENST00000533953 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
CMTM1-219ENST00000533953 FBXO41Q8TF61 875 aa19.68■□□□□ 0.74
CMTM1-219ENST00000533953 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
CMTM1-219ENST00000533953 KCNA6P17658 529 aa19.67■□□□□ 0.74
CMTM1-219ENST00000533953 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
CMTM1-219ENST00000533953 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
CMTM1-219ENST00000533953 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
CMTM1-219ENST00000533953 STRCP1A6NGW2 1772 aa19.65■□□□□ 0.74
CMTM1-219ENST00000533953 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
CMTM1-219ENST00000533953 RPGRIP1LQ68CZ1 1315 aa19.64■□□□□ 0.73
CMTM1-219ENST00000533953 ADGRF5Q8IZF2 1346 aa19.64■□□□□ 0.73
CMTM1-219ENST00000533953 KIF1BO60333 1816 aa19.63■□□□□ 0.73
CMTM1-219ENST00000533953 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
CMTM1-219ENST00000533953 PROSER2Q86WR7 435 aaPredicted RBP19.62■□□□□ 0.73
CMTM1-219ENST00000533953 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
CMTM1-219ENST00000533953 METP08581 1390 aa19.61■□□□□ 0.73
CMTM1-219ENST00000533953 CPS1P31327 1500 aa19.61■□□□□ 0.73
CMTM1-219ENST00000533953 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
CMTM1-219ENST00000533953 AMOTL2Q9Y2J4 779 aa19.6■□□□□ 0.73
CMTM1-219ENST00000533953 PTPRUQ92729 1446 aa19.59■□□□□ 0.73
CMTM1-219ENST00000533953 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.72
CMTM1-219ENST00000533953 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.72
CMTM1-219ENST00000533953 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
CMTM1-219ENST00000533953 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
CMTM1-219ENST00000533953 PIP4K2BP78356 416 aa19.56■□□□□ 0.72
CMTM1-219ENST00000533953 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
CMTM1-219ENST00000533953 SETBP1Q9Y6X0 1596 aa19.54■□□□□ 0.72
CMTM1-219ENST00000533953 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
CMTM1-219ENST00000533953 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
CMTM1-219ENST00000533953 NEUROD1Q13562 356 aa19.53■□□□□ 0.72
CMTM1-219ENST00000533953 TMEM132EQ6IEE7 984 aa19.53■□□□□ 0.72
CMTM1-219ENST00000533953 IQSEC2Q5JU85 1478 aa19.53■□□□□ 0.72
CMTM1-219ENST00000533953 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
CMTM1-219ENST00000533953 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
CMTM1-219ENST00000533953 PPLO60437 1756 aa19.51■□□□□ 0.71
CMTM1-219ENST00000533953 TOM1O60784 492 aa19.5■□□□□ 0.71
CMTM1-219ENST00000533953 STK26Q9P289 416 aa19.5■□□□□ 0.71
CMTM1-219ENST00000533953 ALKQ9UM73 1620 aa19.5■□□□□ 0.71
CMTM1-219ENST00000533953 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
CMTM1-219ENST00000533953 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
CMTM1-219ENST00000533953 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
CMTM1-219ENST00000533953 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
CMTM1-219ENST00000533953 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
CMTM1-219ENST00000533953 C14orf93Q9H972 538 aaKnown RBP19.46■□□□□ 0.71
CMTM1-219ENST00000533953 PIK3C2GO75747 1445 aa19.45■□□□□ 0.7
CMTM1-219ENST00000533953 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
CMTM1-219ENST00000533953 IFT172Q9UG01 1749 aa19.44■□□□□ 0.7
CMTM1-219ENST00000533953 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
CMTM1-219ENST00000533953 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
CMTM1-219ENST00000533953 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
CMTM1-219ENST00000533953 MYOM2P54296 1465 aa19.41■□□□□ 0.7
CMTM1-219ENST00000533953 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
CMTM1-219ENST00000533953 SETD1AO15047 1707 aaKnown RBP19.41■□□□□ 0.7
CMTM1-219ENST00000533953 MSH6P52701 1360 aa19.41■□□□□ 0.7
CMTM1-219ENST00000533953 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
CMTM1-219ENST00000533953 ASXL1Q8IXJ9 1541 aa19.4■□□□□ 0.7
CMTM1-219ENST00000533953 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.7
CMTM1-219ENST00000533953 HSPA1LP34931 641 aa19.39■□□□□ 0.69
CMTM1-219ENST00000533953 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
CMTM1-219ENST00000533953 SLAIN2Q9P270 581 aa19.38■□□□□ 0.69
CMTM1-219ENST00000533953 PLEKHH1Q9ULM0 1364 aa19.37■□□□□ 0.69
CMTM1-219ENST00000533953 ATF3P18847 181 aa19.36■□□□□ 0.69
CMTM1-219ENST00000533953 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
CMTM1-219ENST00000533953 NCOA3Q9Y6Q9 1424 aa19.35■□□□□ 0.69
CMTM1-219ENST00000533953 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
CMTM1-219ENST00000533953 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
CMTM1-219ENST00000533953 TRAK1Q9UPV9 953 aa19.35■□□□□ 0.69
CMTM1-219ENST00000533953 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
CMTM1-219ENST00000533953 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
CMTM1-219ENST00000533953 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.68
CMTM1-219ENST00000533953 PTCH1Q13635 1447 aa19.33■□□□□ 0.68
CMTM1-219ENST00000533953 PRAM1Q96QH2 718 aa19.31■□□□□ 0.68
CMTM1-219ENST00000533953 ADGRL3Q9HAR2 1447 aa19.3■□□□□ 0.68
CMTM1-219ENST00000533953 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.3■□□□□ 0.68
CMTM1-219ENST00000533953 PRAG1Q86YV5 1406 aa19.29■□□□□ 0.68
CMTM1-219ENST00000533953 NUTM2FA1L443 756 aa19.29■□□□□ 0.68
CMTM1-219ENST00000533953 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
CMTM1-219ENST00000533953 ADGRB1O14514 1584 aa19.28■□□□□ 0.68
CMTM1-219ENST00000533953 TECPR2O15040 1411 aa19.28■□□□□ 0.68
CMTM1-219ENST00000533953 FAM135BQ49AJ0 1406 aa19.28■□□□□ 0.68
CMTM1-219ENST00000533953 POGKQ9P215 609 aa19.28■□□□□ 0.68
CMTM1-219ENST00000533953 BRINP3Q76B58 766 aa19.26■□□□□ 0.67
CMTM1-219ENST00000533953 DDX17Q92841 729 aaKnown RBP19.26■□□□□ 0.67
CMTM1-219ENST00000533953 SIRT1Q96EB6 747 aa19.26■□□□□ 0.67
CMTM1-219ENST00000533953 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms