RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.55■■□□□ 1.36
TSKU-204ENST00000533752 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
TSKU-204ENST00000533752 CLTCL1P53675 1640 aa23.53■■□□□ 1.36
TSKU-204ENST00000533752 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
TSKU-204ENST00000533752 ILDR1Q86SU0 546 aaPredicted RBP23.51■■□□□ 1.35
TSKU-204ENST00000533752 MPHOSPH9Q99550 1183 aa23.51■■□□□ 1.35
TSKU-204ENST00000533752 PLEKHG1Q9ULL1 1385 aa23.51■■□□□ 1.35
TSKU-204ENST00000533752 HRCP23327 699 aa23.48■■□□□ 1.35
TSKU-204ENST00000533752 KIF1BO60333 1816 aa23.47■■□□□ 1.35
TSKU-204ENST00000533752 CCDC144AA2RUR9 1427 aa23.45■■□□□ 1.34
TSKU-204ENST00000533752 BCANQ96GW7 911 aa23.45■■□□□ 1.34
TSKU-204ENST00000533752 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
TSKU-204ENST00000533752 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
TSKU-204ENST00000533752 FOXD1Q16676 465 aa23.42■■□□□ 1.34
TSKU-204ENST00000533752 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
TSKU-204ENST00000533752 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
TSKU-204ENST00000533752 STRCP1A6NGW2 1772 aa23.38■■□□□ 1.33
TSKU-204ENST00000533752 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
TSKU-204ENST00000533752 NWD1Q149M9 1564 aa23.37■■□□□ 1.33
TSKU-204ENST00000533752 NUTM2DQ5VT03 806 aaPredicted RBP23.37■■□□□ 1.33
TSKU-204ENST00000533752 TBX22Q9Y458 520 aa23.37■■□□□ 1.33
TSKU-204ENST00000533752 LRRC7Q96NW7 1537 aa23.37■■□□□ 1.33
TSKU-204ENST00000533752 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
TSKU-204ENST00000533752 SETBP1Q9Y6X0 1596 aa23.36■■□□□ 1.33
TSKU-204ENST00000533752 KCNA6P17658 529 aa23.36■■□□□ 1.33
TSKU-204ENST00000533752 ADAMTS13Q76LX8 1427 aa23.35■■□□□ 1.33
TSKU-204ENST00000533752 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
TSKU-204ENST00000533752 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
TSKU-204ENST00000533752 SPATA31E1Q6ZUB1 1445 aa23.32■■□□□ 1.32
TSKU-204ENST00000533752 UBAP1LF5GYI3 381 aa23.31■■□□□ 1.32
TSKU-204ENST00000533752 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
TSKU-204ENST00000533752 NRXN3Q9Y4C0 1643 aa23.3■■□□□ 1.32
TSKU-204ENST00000533752 PPLO60437 1756 aa23.28■■□□□ 1.32
TSKU-204ENST00000533752 TOM1O60784 492 aa23.28■■□□□ 1.32
TSKU-204ENST00000533752 CHD2O14647 1828 aaKnown RBP23.28■■□□□ 1.32
TSKU-204ENST00000533752 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
TSKU-204ENST00000533752 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
TSKU-204ENST00000533752 PROSER2Q86WR7 435 aaPredicted RBP23.24■■□□□ 1.31
TSKU-204ENST00000533752 RGL3Q3MIN7 710 aa23.22■■□□□ 1.31
TSKU-204ENST00000533752 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
TSKU-204ENST00000533752 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
TSKU-204ENST00000533752 IFT172Q9UG01 1749 aa23.21■■□□□ 1.31
TSKU-204ENST00000533752 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
TSKU-204ENST00000533752 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
TSKU-204ENST00000533752 PTPRUQ92729 1446 aa23.18■■□□□ 1.3
TSKU-204ENST00000533752 METP08581 1390 aa23.18■■□□□ 1.3
TSKU-204ENST00000533752 AMOTL2Q9Y2J4 779 aa23.18■■□□□ 1.3
TSKU-204ENST00000533752 ALKQ9UM73 1620 aa23.18■■□□□ 1.3
TSKU-204ENST00000533752 MYOM2P54296 1465 aa23.17■■□□□ 1.3
TSKU-204ENST00000533752 MSH6P52701 1360 aa23.16■■□□□ 1.3
TSKU-204ENST00000533752 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
TSKU-204ENST00000533752 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
TSKU-204ENST00000533752 PIK3C2GO75747 1445 aa23.15■■□□□ 1.3
TSKU-204ENST00000533752 PIP4K2BP78356 416 aa23.14■■□□□ 1.29
TSKU-204ENST00000533752 ADGRF5Q8IZF2 1346 aa23.13■■□□□ 1.29
TSKU-204ENST00000533752 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
TSKU-204ENST00000533752 PRAG1Q86YV5 1406 aa23.12■■□□□ 1.29
TSKU-204ENST00000533752 NRXN1Q9ULB1 1477 aa23.11■■□□□ 1.29
TSKU-204ENST00000533752 C14orf37Q86TY3 774 aa23.11■■□□□ 1.29
TSKU-204ENST00000533752 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
TSKU-204ENST00000533752 STAC3Q96MF2 364 aa23.09■■□□□ 1.29
TSKU-204ENST00000533752 LAMC1P11047 1609 aa23.08■■□□□ 1.29
TSKU-204ENST00000533752 DCCP43146 1447 aa23.07■■□□□ 1.28
TSKU-204ENST00000533752 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
TSKU-204ENST00000533752 CADPS2Q86UW7 1296 aa23.04■■□□□ 1.28
TSKU-204ENST00000533752 FAM135BQ49AJ0 1406 aa23.04■■□□□ 1.28
TSKU-204ENST00000533752 ADGRL3Q9HAR2 1447 aa23.03■■□□□ 1.28
TSKU-204ENST00000533752 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
TSKU-204ENST00000533752 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
TSKU-204ENST00000533752 TECPR2O15040 1411 aa23.02■■□□□ 1.28
TSKU-204ENST00000533752 ATF3P18847 181 aa23.02■■□□□ 1.28
TSKU-204ENST00000533752 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
TSKU-204ENST00000533752 ASXL1Q8IXJ9 1541 aa23.02■■□□□ 1.28
TSKU-204ENST00000533752 DCAF11Q8TEB1 546 aa23.01■■□□□ 1.27
TSKU-204ENST00000533752 ROBO2Q9HCK4 1378 aa23.01■■□□□ 1.27
TSKU-204ENST00000533752 HSPA1LP34931 641 aa23■■□□□ 1.27
TSKU-204ENST00000533752 DHX57Q6P158 1386 aaKnown RBP23■■□□□ 1.27
TSKU-204ENST00000533752 KNDC1Q76NI1 1749 aa22.99■■□□□ 1.27
TSKU-204ENST00000533752 SLAIN2Q9P270 581 aa22.99■■□□□ 1.27
TSKU-204ENST00000533752 ABCC11Q96J66 1382 aa22.99■■□□□ 1.27
TSKU-204ENST00000533752 YTHDC2Q9H6S0 1430 aaKnown RBP22.98■■□□□ 1.27
TSKU-204ENST00000533752 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
TSKU-204ENST00000533752 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
TSKU-204ENST00000533752 KDM2AQ9Y2K7 1162 aa22.96■■□□□ 1.27
TSKU-204ENST00000533752 CFAP70Q5T0N1 1121 aa22.95■■□□□ 1.26
TSKU-204ENST00000533752 TMEM132EQ6IEE7 984 aa22.94■■□□□ 1.26
TSKU-204ENST00000533752 STK26Q9P289 416 aa22.93■■□□□ 1.26
TSKU-204ENST00000533752 SIRT1Q96EB6 747 aa22.91■■□□□ 1.26
TSKU-204ENST00000533752 ADGRB1O14514 1584 aa22.91■■□□□ 1.26
TSKU-204ENST00000533752 MST1RQ04912 1400 aa22.91■■□□□ 1.26
TSKU-204ENST00000533752 CDC42BPGQ6DT37 1551 aa22.89■■□□□ 1.26
TSKU-204ENST00000533752 DLC1Q96QB1 1528 aa22.89■■□□□ 1.26
TSKU-204ENST00000533752 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
TSKU-204ENST00000533752 SIN3AQ96ST3 1273 aa22.85■■□□□ 1.25
TSKU-204ENST00000533752 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
TSKU-204ENST00000533752 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
TSKU-204ENST00000533752 WAPLQ7Z5K2 1190 aa22.84■■□□□ 1.25
TSKU-204ENST00000533752 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
TSKU-204ENST00000533752 PLEKHH1Q9ULM0 1364 aa22.83■■□□□ 1.25
TSKU-204ENST00000533752 PHLPP1O60346 1717 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms