RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 CLTCL1P53675 1640 aa25.88■■□□□ 1.73
NXF1-217ENST00000533671 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
NXF1-217ENST00000533671 RIMS2Q9UQ26 1411 aa25.88■■□□□ 1.73
NXF1-217ENST00000533671 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
NXF1-217ENST00000533671 LTBP4Q8N2S1 1624 aa25.84■■□□□ 1.73
NXF1-217ENST00000533671 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
NXF1-217ENST00000533671 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
NXF1-217ENST00000533671 HRCP23327 699 aa25.82■■□□□ 1.72
NXF1-217ENST00000533671 NUTM2DQ5VT03 806 aaPredicted RBP25.82■■□□□ 1.72
NXF1-217ENST00000533671 CCDC144AA2RUR9 1427 aa25.79■■□□□ 1.72
NXF1-217ENST00000533671 SLC26A8Q96RN1 970 aa25.77■■□□□ 1.72
NXF1-217ENST00000533671 PLEKHG1Q9ULL1 1385 aa25.77■■□□□ 1.72
NXF1-217ENST00000533671 FBXO41Q8TF61 875 aa25.76■■□□□ 1.71
NXF1-217ENST00000533671 CPS1P31327 1500 aa25.76■■□□□ 1.71
NXF1-217ENST00000533671 ILDR1Q86SU0 546 aaPredicted RBP25.73■■□□□ 1.71
NXF1-217ENST00000533671 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
NXF1-217ENST00000533671 STRCP1A6NGW2 1772 aa25.71■■□□□ 1.71
NXF1-217ENST00000533671 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
NXF1-217ENST00000533671 NEXMIFQ5QGS0 1516 aa25.68■■□□□ 1.7
NXF1-217ENST00000533671 RGL3Q3MIN7 710 aa25.67■■□□□ 1.7
NXF1-217ENST00000533671 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
NXF1-217ENST00000533671 VGFO15240 615 aaPredicted RBP25.65■■□□□ 1.7
NXF1-217ENST00000533671 KCNA6P17658 529 aa25.65■■□□□ 1.7
NXF1-217ENST00000533671 TBX22Q9Y458 520 aa25.65■■□□□ 1.7
NXF1-217ENST00000533671 DIP2AQ14689 1571 aa25.65■■□□□ 1.7
NXF1-217ENST00000533671 PPLO60437 1756 aa25.64■■□□□ 1.7
NXF1-217ENST00000533671 CHD2O14647 1828 aaKnown RBP25.62■■□□□ 1.69
NXF1-217ENST00000533671 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
NXF1-217ENST00000533671 LRRC7Q96NW7 1537 aa25.6■■□□□ 1.69
NXF1-217ENST00000533671 UBAP1LF5GYI3 381 aa25.6■■□□□ 1.69
NXF1-217ENST00000533671 ANKRD30BQ9BXX2 1392 aa25.59■■□□□ 1.69
NXF1-217ENST00000533671 SETBP1Q9Y6X0 1596 aa25.59■■□□□ 1.69
NXF1-217ENST00000533671 SPATA31E1Q6ZUB1 1445 aa25.58■■□□□ 1.69
NXF1-217ENST00000533671 PROSER2Q86WR7 435 aaPredicted RBP25.58■■□□□ 1.69
NXF1-217ENST00000533671 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
NXF1-217ENST00000533671 NWD1Q149M9 1564 aa25.56■■□□□ 1.68
NXF1-217ENST00000533671 PIK3R4Q99570 1358 aa25.56■■□□□ 1.68
NXF1-217ENST00000533671 IFT172Q9UG01 1749 aa25.54■■□□□ 1.68
NXF1-217ENST00000533671 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
NXF1-217ENST00000533671 TOM1O60784 492 aa25.54■■□□□ 1.68
NXF1-217ENST00000533671 XIRP1Q702N8 1843 aaKnown RBP25.53■■□□□ 1.68
NXF1-217ENST00000533671 AMOTL2Q9Y2J4 779 aa25.51■■□□□ 1.67
NXF1-217ENST00000533671 SCAF1Q9H7N4 1312 aaKnown RBP25.51■■□□□ 1.67
NXF1-217ENST00000533671 TMEM94Q12767 1356 aa25.5■■□□□ 1.67
NXF1-217ENST00000533671 RBM33Q96EV2 1170 aaKnown RBP25.5■■□□□ 1.67
NXF1-217ENST00000533671 ADGRF5Q8IZF2 1346 aa25.49■■□□□ 1.67
NXF1-217ENST00000533671 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
NXF1-217ENST00000533671 METP08581 1390 aa25.47■■□□□ 1.67
NXF1-217ENST00000533671 PIP4K2BP78356 416 aa25.47■■□□□ 1.67
NXF1-217ENST00000533671 C14orf37Q86TY3 774 aa25.47■■□□□ 1.67
NXF1-217ENST00000533671 PTPRUQ92729 1446 aa25.46■■□□□ 1.67
NXF1-217ENST00000533671 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
NXF1-217ENST00000533671 MSH6P52701 1360 aa25.43■■□□□ 1.66
NXF1-217ENST00000533671 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
NXF1-217ENST00000533671 KDM2AQ9Y2K7 1162 aa25.42■■□□□ 1.66
NXF1-217ENST00000533671 XRN1Q8IZH2 1706 aaKnown RBP25.42■■□□□ 1.66
NXF1-217ENST00000533671 MYOM2P54296 1465 aa25.4■■□□□ 1.66
NXF1-217ENST00000533671 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
NXF1-217ENST00000533671 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
NXF1-217ENST00000533671 DHX57Q6P158 1386 aaKnown RBP25.36■■□□□ 1.65
NXF1-217ENST00000533671 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
NXF1-217ENST00000533671 LAMC1P11047 1609 aa25.34■■□□□ 1.65
NXF1-217ENST00000533671 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
NXF1-217ENST00000533671 STK26Q9P289 416 aa25.33■■□□□ 1.65
NXF1-217ENST00000533671 NRXN1Q9ULB1 1477 aa25.33■■□□□ 1.65
NXF1-217ENST00000533671 ATF3P18847 181 aa25.32■■□□□ 1.64
NXF1-217ENST00000533671 NEUROD1Q13562 356 aa25.32■■□□□ 1.64
NXF1-217ENST00000533671 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
NXF1-217ENST00000533671 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
NXF1-217ENST00000533671 C19orf44Q9H6X5 657 aa25.32■■□□□ 1.64
NXF1-217ENST00000533671 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.32■■□□□ 1.64
NXF1-217ENST00000533671 C14orf93Q9H972 538 aaKnown RBP25.31■■□□□ 1.64
NXF1-217ENST00000533671 SIN3AQ96ST3 1273 aa25.3■■□□□ 1.64
NXF1-217ENST00000533671 CADPS2Q86UW7 1296 aa25.29■■□□□ 1.64
NXF1-217ENST00000533671 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
NXF1-217ENST00000533671 LRPPRCP42704 1394 aaKnown RBP25.27■■□□□ 1.64
NXF1-217ENST00000533671 ROBO2Q9HCK4 1378 aa25.27■■□□□ 1.64
NXF1-217ENST00000533671 SLAIN2Q9P270 581 aa25.26■■□□□ 1.63
NXF1-217ENST00000533671 YTHDC2Q9H6S0 1430 aaKnown RBP25.25■■□□□ 1.63
NXF1-217ENST00000533671 ASXL1Q8IXJ9 1541 aa25.25■■□□□ 1.63
NXF1-217ENST00000533671 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
NXF1-217ENST00000533671 NALCNQ8IZF0 1738 aa25.24■■□□□ 1.63
NXF1-217ENST00000533671 ADGRL3Q9HAR2 1447 aa25.23■■□□□ 1.63
NXF1-217ENST00000533671 HSPA1LP34931 641 aa25.23■■□□□ 1.63
NXF1-217ENST00000533671 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
NXF1-217ENST00000533671 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
NXF1-217ENST00000533671 ROBO1Q9Y6N7 1651 aa25.22■■□□□ 1.63
NXF1-217ENST00000533671 DCCP43146 1447 aa25.21■■□□□ 1.63
NXF1-217ENST00000533671 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.63
NXF1-217ENST00000533671 TECPR2O15040 1411 aa25.2■■□□□ 1.62
NXF1-217ENST00000533671 WAPLQ7Z5K2 1190 aa25.19■■□□□ 1.62
NXF1-217ENST00000533671 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
NXF1-217ENST00000533671 POGKQ9P215 609 aa25.15■■□□□ 1.62
NXF1-217ENST00000533671 TRAK1Q9UPV9 953 aa25.15■■□□□ 1.62
NXF1-217ENST00000533671 KIAA1210Q9ULL0 1709 aa25.15■■□□□ 1.62
NXF1-217ENST00000533671 SIRT1Q96EB6 747 aa25.14■■□□□ 1.62
NXF1-217ENST00000533671 ADGRB1O14514 1584 aa25.14■■□□□ 1.61
NXF1-217ENST00000533671 TONSLQ96HA7 1378 aa25.12■■□□□ 1.61
NXF1-217ENST00000533671 PLEKHH1Q9ULM0 1364 aa25.12■■□□□ 1.61
NXF1-217ENST00000533671 SAFB2Q14151 953 aaKnown RBP eCLIP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms