RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
SOX9-AS1-212ENST00000533232 EMP3P54852 163 aa10.68□□□□□ -0.7
SOX9-AS1-212ENST00000533232 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
SOX9-AS1-212ENST00000533232 C11orf95C9JLR9 678 aaPredicted RBP10.67□□□□□ -0.7
SOX9-AS1-212ENST00000533232 KDM5CP41229 1560 aa10.67□□□□□ -0.7
SOX9-AS1-212ENST00000533232 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
SOX9-AS1-212ENST00000533232 PREX2Q70Z35 1606 aa10.67□□□□□ -0.7
SOX9-AS1-212ENST00000533232 KTN1Q86UP2 1357 aaKnown RBP10.66□□□□□ -0.7
SOX9-AS1-212ENST00000533232 KIF15Q9NS87 1388 aa10.66□□□□□ -0.7
SOX9-AS1-212ENST00000533232 PLEKHH2Q8IVE3 1493 aa10.66□□□□□ -0.7
SOX9-AS1-212ENST00000533232 MAST1Q9Y2H9 1570 aa10.65□□□□□ -0.7
SOX9-AS1-212ENST00000533232 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
SOX9-AS1-212ENST00000533232 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
SOX9-AS1-212ENST00000533232 FAM9BQ8IZU0 186 aa10.64□□□□□ -0.71
SOX9-AS1-212ENST00000533232 CARD11Q9BXL7 1154 aa10.63□□□□□ -0.71
SOX9-AS1-212ENST00000533232 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
SOX9-AS1-212ENST00000533232 CDC42BPBQ9Y5S2 1711 aa10.63□□□□□ -0.71
SOX9-AS1-212ENST00000533232 SAMD9LQ8IVG5 1584 aa10.62□□□□□ -0.71
SOX9-AS1-212ENST00000533232 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.71
SOX9-AS1-212ENST00000533232 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
SOX9-AS1-212ENST00000533232 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
SOX9-AS1-212ENST00000533232 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
SOX9-AS1-212ENST00000533232 DHX29Q7Z478 1369 aaKnown RBP10.61□□□□□ -0.71
SOX9-AS1-212ENST00000533232 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
SOX9-AS1-212ENST00000533232 BCORL1Q5H9F3 1711 aa10.6□□□□□ -0.71
SOX9-AS1-212ENST00000533232 UNC13BO14795 1591 aa10.6□□□□□ -0.71
SOX9-AS1-212ENST00000533232 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
SOX9-AS1-212ENST00000533232 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
SOX9-AS1-212ENST00000533232 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
SOX9-AS1-212ENST00000533232 RALBP1Q15311 655 aa10.59□□□□□ -0.71
SOX9-AS1-212ENST00000533232 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
SOX9-AS1-212ENST00000533232 CHD1O14646 1710 aa10.59□□□□□ -0.71
SOX9-AS1-212ENST00000533232 MYO5CQ9NQX4 1742 aa10.59□□□□□ -0.71
SOX9-AS1-212ENST00000533232 CCDC184Q52MB2 194 aa10.58□□□□□ -0.72
SOX9-AS1-212ENST00000533232 SMG6Q86US8 1419 aaKnown RBP10.58□□□□□ -0.72
SOX9-AS1-212ENST00000533232 ABCC2Q92887 1545 aa10.58□□□□□ -0.72
SOX9-AS1-212ENST00000533232 DCAF11Q8TEB1 546 aa10.58□□□□□ -0.72
SOX9-AS1-212ENST00000533232 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
SOX9-AS1-212ENST00000533232 DUOX2Q9NRD8 1548 aa10.57□□□□□ -0.72
SOX9-AS1-212ENST00000533232 LAMC1P11047 1609 aa10.57□□□□□ -0.72
SOX9-AS1-212ENST00000533232 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
SOX9-AS1-212ENST00000533232 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
SOX9-AS1-212ENST00000533232 IQGAP3Q86VI3 1631 aa10.57□□□□□ -0.72
SOX9-AS1-212ENST00000533232 EIF2AK4Q9P2K8 1649 aaKnown RBP10.57□□□□□ -0.72
SOX9-AS1-212ENST00000533232 POLR3GLQ9BT43 218 aa10.56□□□□□ -0.72
SOX9-AS1-212ENST00000533232 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
SOX9-AS1-212ENST00000533232 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
SOX9-AS1-212ENST00000533232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX9-AS1-212ENST00000533232 SYCP2Q9BX26 1530 aa10.56□□□□□ -0.72
SOX9-AS1-212ENST00000533232 TRPM1Q7Z4N2 1603 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 ERBINQ96RT1 1412 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 WASHC2CQ9Y4E1 1318 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 ATP10AO60312 1499 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 MYBBP1AQ9BQG0 1328 aaKnown RBP10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
SOX9-AS1-212ENST00000533232 TTC37Q6PGP7 1564 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 PRAG1Q86YV5 1406 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 GPRASP1Q5JY77 1395 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 ST20-MTHFSA0A0A6YYL1 179 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 E9PCH4 1651 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 UHRF1BP1LA0JNW5 1464 aa10.54□□□□□ -0.72
SOX9-AS1-212ENST00000533232 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
SOX9-AS1-212ENST00000533232 FANCIQ9NVI1 1328 aa10.53□□□□□ -0.72
SOX9-AS1-212ENST00000533232 PNISRQ8TF01 805 aaKnown RBP10.53□□□□□ -0.72
SOX9-AS1-212ENST00000533232 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
SOX9-AS1-212ENST00000533232 MAGI2Q86UL8 1455 aa10.52□□□□□ -0.72
SOX9-AS1-212ENST00000533232 PLCH2O75038 1416 aa10.52□□□□□ -0.73
SOX9-AS1-212ENST00000533232 NUBP1P53384 320 aa10.52□□□□□ -0.73
SOX9-AS1-212ENST00000533232 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
SOX9-AS1-212ENST00000533232 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
SOX9-AS1-212ENST00000533232 INSRP06213 1382 aa10.51□□□□□ -0.73
SOX9-AS1-212ENST00000533232 LRPPRCP42704 1394 aaKnown RBP10.51□□□□□ -0.73
SOX9-AS1-212ENST00000533232 IRX6P78412 446 aaPredicted RBP10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 NLRP13Q86W25 1043 aa10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 PRDM15P57071 1507 aaPredicted RBP10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 RNF123Q5XPI4 1314 aa10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
SOX9-AS1-212ENST00000533232 ZMYM4Q5VZL5 1548 aa10.49□□□□□ -0.73
SOX9-AS1-212ENST00000533232 A2MP01023 1474 aa10.48□□□□□ -0.73
SOX9-AS1-212ENST00000533232 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
SOX9-AS1-212ENST00000533232 ZCCHC11Q5TAX3 1644 aaKnown RBP10.48□□□□□ -0.73
SOX9-AS1-212ENST00000533232 ABCC1P33527 1531 aa10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 TMF1P82094 1093 aa10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 PARD3Q8TEW0 1356 aa10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 PLA2R1Q13018 1463 aa10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 COL17A1Q9UMD9 1497 aaPredicted RBP10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 CDCA8Q53HL2 280 aa10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
SOX9-AS1-212ENST00000533232 RGL3Q3MIN7 710 aa10.46□□□□□ -0.74
SOX9-AS1-212ENST00000533232 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
SOX9-AS1-212ENST00000533232 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
SOX9-AS1-212ENST00000533232 RNF17Q9BXT8 1623 aaKnown RBP10.44□□□□□ -0.74
SOX9-AS1-212ENST00000533232 KANK1Q14678 1352 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms