RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
SOX9-AS1-212ENST00000533232 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
SOX9-AS1-212ENST00000533232 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
SOX9-AS1-212ENST00000533232 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
SOX9-AS1-212ENST00000533232 FOXD1Q16676 465 aa19.07■□□□□ 0.64
SOX9-AS1-212ENST00000533232 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
SOX9-AS1-212ENST00000533232 MSH5O43196 834 aa18.24■□□□□ 0.51
SOX9-AS1-212ENST00000533232 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
SOX9-AS1-212ENST00000533232 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
SOX9-AS1-212ENST00000533232 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
SOX9-AS1-212ENST00000533232 ADRA2BP18089 450 aa17.13■□□□□ 0.33
SOX9-AS1-212ENST00000533232 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
SOX9-AS1-212ENST00000533232 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
SOX9-AS1-212ENST00000533232 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
SOX9-AS1-212ENST00000533232 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
SOX9-AS1-212ENST00000533232 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
SOX9-AS1-212ENST00000533232 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
SOX9-AS1-212ENST00000533232 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
SOX9-AS1-212ENST00000533232 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
SOX9-AS1-212ENST00000533232 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
SOX9-AS1-212ENST00000533232 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
SOX9-AS1-212ENST00000533232 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
SOX9-AS1-212ENST00000533232 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
SOX9-AS1-212ENST00000533232 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
SOX9-AS1-212ENST00000533232 POTEHQ6S545 545 aa14.75□□□□□ -0.05
SOX9-AS1-212ENST00000533232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
SOX9-AS1-212ENST00000533232 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.14
SOX9-AS1-212ENST00000533232 DSG3P32926 999 aa14.18□□□□□ -0.14
SOX9-AS1-212ENST00000533232 CAPN15O75808 1086 aa14.12□□□□□ -0.15
SOX9-AS1-212ENST00000533232 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
SOX9-AS1-212ENST00000533232 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
SOX9-AS1-212ENST00000533232 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
SOX9-AS1-212ENST00000533232 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
SOX9-AS1-212ENST00000533232 APLP2Q06481 763 aa13.76□□□□□ -0.21
SOX9-AS1-212ENST00000533232 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
SOX9-AS1-212ENST00000533232 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
SOX9-AS1-212ENST00000533232 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
SOX9-AS1-212ENST00000533232 ABCB7O75027 752 aa13.67□□□□□ -0.22
SOX9-AS1-212ENST00000533232 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
SOX9-AS1-212ENST00000533232 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
SOX9-AS1-212ENST00000533232 SHROOM4Q9ULL8 1493 aa13.58□□□□□ -0.24
SOX9-AS1-212ENST00000533232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
SOX9-AS1-212ENST00000533232 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
SOX9-AS1-212ENST00000533232 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
SOX9-AS1-212ENST00000533232 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
SOX9-AS1-212ENST00000533232 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
SOX9-AS1-212ENST00000533232 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
SOX9-AS1-212ENST00000533232 SUPT5HO00267 1087 aaKnown RBP13.36□□□□□ -0.27
SOX9-AS1-212ENST00000533232 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
SOX9-AS1-212ENST00000533232 POLA2Q14181 598 aa13.16□□□□□ -0.3
SOX9-AS1-212ENST00000533232 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
SOX9-AS1-212ENST00000533232 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
SOX9-AS1-212ENST00000533232 HAX1O00165 279 aa13.08□□□□□ -0.32
SOX9-AS1-212ENST00000533232 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
SOX9-AS1-212ENST00000533232 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
SOX9-AS1-212ENST00000533232 ABCC9O60706 1549 aa12.95□□□□□ -0.34
SOX9-AS1-212ENST00000533232 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
SOX9-AS1-212ENST00000533232 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
SOX9-AS1-212ENST00000533232 KCNA4P22459 653 aa12.92□□□□□ -0.34
SOX9-AS1-212ENST00000533232 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
SOX9-AS1-212ENST00000533232 NACADO15069 1562 aa12.89□□□□□ -0.35
SOX9-AS1-212ENST00000533232 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
SOX9-AS1-212ENST00000533232 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
SOX9-AS1-212ENST00000533232 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
SOX9-AS1-212ENST00000533232 EVX2Q03828 476 aa12.75□□□□□ -0.37
SOX9-AS1-212ENST00000533232 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
SOX9-AS1-212ENST00000533232 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
SOX9-AS1-212ENST00000533232 HRCP23327 699 aa12.64□□□□□ -0.39
SOX9-AS1-212ENST00000533232 LHX8Q68G74 356 aa12.64□□□□□ -0.39
SOX9-AS1-212ENST00000533232 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
SOX9-AS1-212ENST00000533232 PCGF6Q9BYE7 350 aa12.57□□□□□ -0.4
SOX9-AS1-212ENST00000533232 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
SOX9-AS1-212ENST00000533232 LOC105371045A0A1W2PR82 267 aa12.54□□□□□ -0.4
SOX9-AS1-212ENST00000533232 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
SOX9-AS1-212ENST00000533232 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
SOX9-AS1-212ENST00000533232 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
SOX9-AS1-212ENST00000533232 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
SOX9-AS1-212ENST00000533232 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-212ENST00000533232 GABBR2O75899 941 aa12.51□□□□□ -0.41
SOX9-AS1-212ENST00000533232 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
SOX9-AS1-212ENST00000533232 WIZO95785 1651 aa12.47□□□□□ -0.41
SOX9-AS1-212ENST00000533232 PLSCR2Q9NRY7 297 aa12.45□□□□□ -0.42
SOX9-AS1-212ENST00000533232 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
SOX9-AS1-212ENST00000533232 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
SOX9-AS1-212ENST00000533232 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
SOX9-AS1-212ENST00000533232 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
SOX9-AS1-212ENST00000533232 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-212ENST00000533232 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
SOX9-AS1-212ENST00000533232 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
SOX9-AS1-212ENST00000533232 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
SOX9-AS1-212ENST00000533232 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
SOX9-AS1-212ENST00000533232 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
SOX9-AS1-212ENST00000533232 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
SOX9-AS1-212ENST00000533232 FAM9AQ8IZU1 332 aaPredicted RBP12.3□□□□□ -0.44
SOX9-AS1-212ENST00000533232 FBLN2P98095 1184 aa12.28□□□□□ -0.44
SOX9-AS1-212ENST00000533232 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
SOX9-AS1-212ENST00000533232 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
SOX9-AS1-212ENST00000533232 EEA1Q15075 1411 aa12.21□□□□□ -0.45
SOX9-AS1-212ENST00000533232 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.45
SOX9-AS1-212ENST00000533232 CLCN6P51797 869 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms