RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
CPSF1-210ENST00000532935 KIF1BO60333 1816 aa22.98■■□□□ 1.27
CPSF1-210ENST00000532935 HDGFP51858 240 aaKnown RBP22.94■■□□□ 1.26
CPSF1-210ENST00000532935 PLEKHG1Q9ULL1 1385 aa22.92■■□□□ 1.26
CPSF1-210ENST00000532935 PPP1R15AO75807 674 aaPredicted RBP22.92■■□□□ 1.26
CPSF1-210ENST00000532935 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
CPSF1-210ENST00000532935 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
CPSF1-210ENST00000532935 SLC26A8Q96RN1 970 aa22.9■■□□□ 1.26
CPSF1-210ENST00000532935 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.26
CPSF1-210ENST00000532935 BCANQ96GW7 911 aa22.89■■□□□ 1.25
CPSF1-210ENST00000532935 MPHOSPH9Q99550 1183 aa22.89■■□□□ 1.25
CPSF1-210ENST00000532935 LRRC7Q96NW7 1537 aa22.88■■□□□ 1.25
CPSF1-210ENST00000532935 NUTM2DQ5VT03 806 aaPredicted RBP22.88■■□□□ 1.25
CPSF1-210ENST00000532935 FOXD1Q16676 465 aa22.87■■□□□ 1.25
CPSF1-210ENST00000532935 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
CPSF1-210ENST00000532935 CHD2O14647 1828 aaKnown RBP22.87■■□□□ 1.25
CPSF1-210ENST00000532935 XIRP1Q702N8 1843 aaKnown RBP22.87■■□□□ 1.25
CPSF1-210ENST00000532935 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
CPSF1-210ENST00000532935 NWD1Q149M9 1564 aa22.84■■□□□ 1.25
CPSF1-210ENST00000532935 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
CPSF1-210ENST00000532935 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
CPSF1-210ENST00000532935 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
CPSF1-210ENST00000532935 KCNA6P17658 529 aa22.82■■□□□ 1.24
CPSF1-210ENST00000532935 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
CPSF1-210ENST00000532935 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
CPSF1-210ENST00000532935 TBX22Q9Y458 520 aa22.8■■□□□ 1.24
CPSF1-210ENST00000532935 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
CPSF1-210ENST00000532935 PPLO60437 1756 aa22.79■■□□□ 1.24
CPSF1-210ENST00000532935 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
CPSF1-210ENST00000532935 NKTRP30414 1462 aaKnown RBP22.78■■□□□ 1.24
CPSF1-210ENST00000532935 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
CPSF1-210ENST00000532935 HRCP23327 699 aa22.76■■□□□ 1.23
CPSF1-210ENST00000532935 TOM1O60784 492 aa22.75■■□□□ 1.23
CPSF1-210ENST00000532935 PIK3R4Q99570 1358 aa22.74■■□□□ 1.23
CPSF1-210ENST00000532935 PROSER2Q86WR7 435 aaPredicted RBP22.73■■□□□ 1.23
CPSF1-210ENST00000532935 RPGRIP1LQ68CZ1 1315 aa22.73■■□□□ 1.23
CPSF1-210ENST00000532935 IFT172Q9UG01 1749 aa22.73■■□□□ 1.23
CPSF1-210ENST00000532935 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
CPSF1-210ENST00000532935 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
CPSF1-210ENST00000532935 VGFO15240 615 aaPredicted RBP22.7■■□□□ 1.22
CPSF1-210ENST00000532935 SETD1AO15047 1707 aaKnown RBP22.69■■□□□ 1.22
CPSF1-210ENST00000532935 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
CPSF1-210ENST00000532935 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
CPSF1-210ENST00000532935 XRN1Q8IZH2 1706 aaKnown RBP22.68■■□□□ 1.22
CPSF1-210ENST00000532935 RBM33Q96EV2 1170 aaKnown RBP22.68■■□□□ 1.22
CPSF1-210ENST00000532935 PTPRUQ92729 1446 aa22.67■■□□□ 1.22
CPSF1-210ENST00000532935 RGL3Q3MIN7 710 aa22.66■■□□□ 1.22
CPSF1-210ENST00000532935 METP08581 1390 aa22.64■■□□□ 1.22
CPSF1-210ENST00000532935 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
CPSF1-210ENST00000532935 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
CPSF1-210ENST00000532935 MSH6P52701 1360 aa22.62■■□□□ 1.21
CPSF1-210ENST00000532935 NCOA3Q9Y6Q9 1424 aa22.61■■□□□ 1.21
CPSF1-210ENST00000532935 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
CPSF1-210ENST00000532935 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.59■■□□□ 1.21
CPSF1-210ENST00000532935 HSPA1LP34931 641 aa22.57■■□□□ 1.2
CPSF1-210ENST00000532935 C14orf37Q86TY3 774 aa22.55■■□□□ 1.2
CPSF1-210ENST00000532935 ROBO1Q9Y6N7 1651 aa22.55■■□□□ 1.2
CPSF1-210ENST00000532935 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
CPSF1-210ENST00000532935 MYOM2P54296 1465 aa22.53■■□□□ 1.2
CPSF1-210ENST00000532935 FAM135BQ49AJ0 1406 aa22.52■■□□□ 1.2
CPSF1-210ENST00000532935 C19orf44Q9H6X5 657 aa22.52■■□□□ 1.2
CPSF1-210ENST00000532935 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
CPSF1-210ENST00000532935 PTCH1Q13635 1447 aa22.51■■□□□ 1.19
CPSF1-210ENST00000532935 NRXN1Q9ULB1 1477 aa22.51■■□□□ 1.19
CPSF1-210ENST00000532935 PRAG1Q86YV5 1406 aa22.5■■□□□ 1.19
CPSF1-210ENST00000532935 LAMC1P11047 1609 aa22.49■■□□□ 1.19
CPSF1-210ENST00000532935 SLAIN2Q9P270 581 aa22.49■■□□□ 1.19
CPSF1-210ENST00000532935 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
CPSF1-210ENST00000532935 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
CPSF1-210ENST00000532935 ATF3P18847 181 aa22.47■■□□□ 1.19
CPSF1-210ENST00000532935 KNDC1Q76NI1 1749 aa22.47■■□□□ 1.19
CPSF1-210ENST00000532935 ROBO2Q9HCK4 1378 aa22.47■■□□□ 1.19
CPSF1-210ENST00000532935 DCCP43146 1447 aa22.47■■□□□ 1.19
CPSF1-210ENST00000532935 ADGRL3Q9HAR2 1447 aa22.46■■□□□ 1.19
CPSF1-210ENST00000532935 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
CPSF1-210ENST00000532935 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
CPSF1-210ENST00000532935 LRPPRCP42704 1394 aaKnown RBP22.42■■□□□ 1.18
CPSF1-210ENST00000532935 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
CPSF1-210ENST00000532935 PHLPP1O60346 1717 aa22.42■■□□□ 1.18
CPSF1-210ENST00000532935 TECPR2O15040 1411 aa22.41■■□□□ 1.18
CPSF1-210ENST00000532935 DCAF11Q8TEB1 546 aa22.41■■□□□ 1.18
CPSF1-210ENST00000532935 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
CPSF1-210ENST00000532935 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
CPSF1-210ENST00000532935 STK26Q9P289 416 aa22.4■■□□□ 1.18
CPSF1-210ENST00000532935 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
CPSF1-210ENST00000532935 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
CPSF1-210ENST00000532935 ABCC11Q96J66 1382 aa22.39■■□□□ 1.18
CPSF1-210ENST00000532935 MST1RQ04912 1400 aa22.39■■□□□ 1.17
CPSF1-210ENST00000532935 STAC3Q96MF2 364 aa22.38■■□□□ 1.17
CPSF1-210ENST00000532935 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
CPSF1-210ENST00000532935 DISP3Q9P2K9 1392 aa22.36■■□□□ 1.17
CPSF1-210ENST00000532935 AHDC1Q5TGY3 1603 aaPredicted RBP22.35■■□□□ 1.17
CPSF1-210ENST00000532935 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
CPSF1-210ENST00000532935 COL16A1Q07092 1604 aaPredicted RBP22.34■■□□□ 1.17
CPSF1-210ENST00000532935 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.17
CPSF1-210ENST00000532935 BRINP3Q76B58 766 aa22.33■■□□□ 1.17
CPSF1-210ENST00000532935 WAPLQ7Z5K2 1190 aa22.33■■□□□ 1.17
CPSF1-210ENST00000532935 NHSL1Q5SYE7 1610 aa22.32■■□□□ 1.16
CPSF1-210ENST00000532935 PLEKHH1Q9ULM0 1364 aa22.31■■□□□ 1.16
CPSF1-210ENST00000532935 C1orf167Q5SNV9 1468 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms