RNA–Protein interactions for RNA: ENST00000532838.1

CKLF-CMTM1-204, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF-CMTM1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-204ENST00000532838 RIMS2Q9UQ26 1411 aa29.93■■■□□ 2.38
CKLF-CMTM1-204ENST00000532838 FBXO41Q8TF61 875 aa29.92■■■□□ 2.38
CKLF-CMTM1-204ENST00000532838 ZNF326Q5BKZ1 582 aaKnown RBP29.9■■■□□ 2.38
CKLF-CMTM1-204ENST00000532838 KIF1BO60333 1816 aa29.88■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 ZFYVE9O95405 1425 aa29.88■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 CPS1P31327 1500 aa29.87■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 CLTCL1P53675 1640 aa29.87■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 IQSEC2Q5JU85 1478 aa29.86■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 ILDR1Q86SU0 546 aaPredicted RBP29.85■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 HRCP23327 699 aa29.84■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 FOXD1Q16676 465 aa29.83■■■□□ 2.37
CKLF-CMTM1-204ENST00000532838 CCDC144AA2RUR9 1427 aa29.82■■■□□ 2.36
CKLF-CMTM1-204ENST00000532838 SLC26A8Q96RN1 970 aa29.8■■■□□ 2.36
CKLF-CMTM1-204ENST00000532838 NUTM2DQ5VT03 806 aaPredicted RBP29.79■■■□□ 2.36
CKLF-CMTM1-204ENST00000532838 SENP3Q9H4L4 574 aaPredicted RBP29.76■■■□□ 2.35
CKLF-CMTM1-204ENST00000532838 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
CKLF-CMTM1-204ENST00000532838 DIP2AQ14689 1571 aa29.7■■■□□ 2.35
CKLF-CMTM1-204ENST00000532838 TBX22Q9Y458 520 aa29.7■■■□□ 2.35
CKLF-CMTM1-204ENST00000532838 KCNA6P17658 529 aa29.69■■■□□ 2.34
CKLF-CMTM1-204ENST00000532838 VGFO15240 615 aaPredicted RBP29.68■■■□□ 2.34
CKLF-CMTM1-204ENST00000532838 STRCP1A6NGW2 1772 aa29.67■■■□□ 2.34
CKLF-CMTM1-204ENST00000532838 NEXMIFQ5QGS0 1516 aa29.67■■■□□ 2.34
CKLF-CMTM1-204ENST00000532838 UBAP1LF5GYI3 381 aa29.66■■■□□ 2.34
CKLF-CMTM1-204ENST00000532838 LRRC7Q96NW7 1537 aa29.64■■■□□ 2.34
CKLF-CMTM1-204ENST00000532838 TOM1O60784 492 aa29.62■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 RGL3Q3MIN7 710 aa29.62■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 PIK3R4Q99570 1358 aa29.62■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 ADAMTS13Q76LX8 1427 aa29.62■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 NKTRP30414 1462 aaKnown RBP29.61■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 SETBP1Q9Y6X0 1596 aa29.61■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 TRIM26Q12899 539 aaPredicted RBP29.61■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 PROSER2Q86WR7 435 aaPredicted RBP29.6■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 NWD1Q149M9 1564 aa29.6■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 CHD2O14647 1828 aaKnown RBP29.58■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 PPLO60437 1756 aa29.58■■■□□ 2.33
CKLF-CMTM1-204ENST00000532838 SPATA31E1Q6ZUB1 1445 aa29.57■■■□□ 2.32
CKLF-CMTM1-204ENST00000532838 ANKRD30BQ9BXX2 1392 aa29.56■■■□□ 2.32
CKLF-CMTM1-204ENST00000532838 NRXN3Q9Y4C0 1643 aa29.54■■■□□ 2.32
CKLF-CMTM1-204ENST00000532838 TMEM94Q12767 1356 aa29.53■■■□□ 2.32
CKLF-CMTM1-204ENST00000532838 SCAF1Q9H7N4 1312 aaKnown RBP29.53■■■□□ 2.32
CKLF-CMTM1-204ENST00000532838 AMOTL2Q9Y2J4 779 aa29.49■■■□□ 2.31
CKLF-CMTM1-204ENST00000532838 PIP4K2BP78356 416 aa29.48■■■□□ 2.31
CKLF-CMTM1-204ENST00000532838 C14orf37Q86TY3 774 aa29.48■■■□□ 2.31
CKLF-CMTM1-204ENST00000532838 IFT172Q9UG01 1749 aa29.47■■■□□ 2.31
CKLF-CMTM1-204ENST00000532838 XIRP1Q702N8 1843 aaKnown RBP29.46■■■□□ 2.31
CKLF-CMTM1-204ENST00000532838 MSH6P52701 1360 aa29.46■■■□□ 2.31
CKLF-CMTM1-204ENST00000532838 METP08581 1390 aa29.44■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 ALKQ9UM73 1620 aa29.43■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 RBM33Q96EV2 1170 aaKnown RBP29.43■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 NCOA3Q9Y6Q9 1424 aa29.43■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 ADGRF5Q8IZF2 1346 aa29.43■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 PTPRUQ92729 1446 aa29.4■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
CKLF-CMTM1-204ENST00000532838 MYOM2P54296 1465 aa29.37■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 STAC3Q96MF2 364 aa29.36■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 SETD1AO15047 1707 aaKnown RBP29.36■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 PIK3C2GO75747 1445 aa29.36■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 ATF3P18847 181 aa29.33■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 DCAF11Q8TEB1 546 aa29.33■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 C19orf44Q9H6X5 657 aa29.33■■■□□ 2.29
CKLF-CMTM1-204ENST00000532838 LAMC1P11047 1609 aa29.31■■■□□ 2.28
CKLF-CMTM1-204ENST00000532838 KDM2AQ9Y2K7 1162 aa29.31■■■□□ 2.28
CKLF-CMTM1-204ENST00000532838 CADPS2Q86UW7 1296 aa29.3■■■□□ 2.28
CKLF-CMTM1-204ENST00000532838 PTCH1Q13635 1447 aa29.29■■■□□ 2.28
CKLF-CMTM1-204ENST00000532838 NRXN1Q9ULB1 1477 aa29.29■■■□□ 2.28
CKLF-CMTM1-204ENST00000532838 C14orf93Q9H972 538 aaKnown RBP29.27■■■□□ 2.28
CKLF-CMTM1-204ENST00000532838 SLAIN2Q9P270 581 aa29.25■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.25■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 PRAG1Q86YV5 1406 aa29.24■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 STK26Q9P289 416 aa29.24■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 DCCP43146 1447 aa29.23■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 FAM135BQ49AJ0 1406 aa29.23■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 HSPA1LP34931 641 aa29.23■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 LRPPRCP42704 1394 aaKnown RBP29.23■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 DHX57Q6P158 1386 aaKnown RBP29.23■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 ADGRL3Q9HAR2 1447 aa29.22■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 CFAP70Q5T0N1 1121 aa29.22■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 TMEM132EQ6IEE7 984 aa29.22■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 ROBO2Q9HCK4 1378 aa29.21■■■□□ 2.27
CKLF-CMTM1-204ENST00000532838 YTHDC2Q9H6S0 1430 aaKnown RBP29.2■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 ABCC11Q96J66 1382 aa29.18■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 ROBO1Q9Y6N7 1651 aa29.18■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 TECPR2O15040 1411 aa29.17■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 ASXL1Q8IXJ9 1541 aa29.16■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 NEUROD1Q13562 356 aa29.16■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 NALCNQ8IZF0 1738 aa29.15■■■□□ 2.26
CKLF-CMTM1-204ENST00000532838 SIN3AQ96ST3 1273 aa29.13■■■□□ 2.25
CKLF-CMTM1-204ENST00000532838 SIRT1Q96EB6 747 aa29.1■■■□□ 2.25
CKLF-CMTM1-204ENST00000532838 PCGF6Q9BYE7 350 aa29.1■■■□□ 2.25
CKLF-CMTM1-204ENST00000532838 WAPLQ7Z5K2 1190 aa29.08■■■□□ 2.25
CKLF-CMTM1-204ENST00000532838 POGKQ9P215 609 aa29.07■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 MST1RQ04912 1400 aa29.06■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 L3MBTL2Q969R5 705 aa29.06■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 ADGRB1O14514 1584 aa29.05■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 KIAA1210Q9ULL0 1709 aa29.03■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
CKLF-CMTM1-204ENST00000532838 DLC1Q96QB1 1528 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms