RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 PLEKHG1Q9ULL1 1385 aa23.95■■□□□ 1.42
LDLRAD3-205ENST00000532490 PIP4K2BP78356 416 aa23.95■■□□□ 1.42
LDLRAD3-205ENST00000532490 KCNA6P17658 529 aa23.94■■□□□ 1.42
LDLRAD3-205ENST00000532490 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
LDLRAD3-205ENST00000532490 HDGFP51858 240 aaKnown RBP23.93■■□□□ 1.42
LDLRAD3-205ENST00000532490 SPHKAPQ2M3C7 1700 aa23.92■■□□□ 1.42
LDLRAD3-205ENST00000532490 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
LDLRAD3-205ENST00000532490 HSPA1LP34931 641 aa23.9■■□□□ 1.42
LDLRAD3-205ENST00000532490 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.9■■□□□ 1.42
LDLRAD3-205ENST00000532490 NWD1Q149M9 1564 aa23.89■■□□□ 1.41
LDLRAD3-205ENST00000532490 PPP1R15AO75807 674 aaPredicted RBP23.88■■□□□ 1.41
LDLRAD3-205ENST00000532490 BCANQ96GW7 911 aa23.87■■□□□ 1.41
LDLRAD3-205ENST00000532490 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
LDLRAD3-205ENST00000532490 TMEM94Q12767 1356 aa23.87■■□□□ 1.41
LDLRAD3-205ENST00000532490 NUTM2DQ5VT03 806 aaPredicted RBP23.86■■□□□ 1.41
LDLRAD3-205ENST00000532490 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
LDLRAD3-205ENST00000532490 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
LDLRAD3-205ENST00000532490 CHD2O14647 1828 aaKnown RBP23.85■■□□□ 1.41
LDLRAD3-205ENST00000532490 DISP3Q9P2K9 1392 aa23.85■■□□□ 1.41
LDLRAD3-205ENST00000532490 NKTRP30414 1462 aaKnown RBP23.85■■□□□ 1.41
LDLRAD3-205ENST00000532490 PROSER2Q86WR7 435 aaPredicted RBP23.83■■□□□ 1.41
LDLRAD3-205ENST00000532490 TRPM2O94759 1503 aa23.83■■□□□ 1.41
LDLRAD3-205ENST00000532490 CLTCL1P53675 1640 aa23.82■■□□□ 1.4
LDLRAD3-205ENST00000532490 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
LDLRAD3-205ENST00000532490 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
LDLRAD3-205ENST00000532490 DIP2AQ14689 1571 aa23.79■■□□□ 1.4
LDLRAD3-205ENST00000532490 PIK3R4Q99570 1358 aa23.77■■□□□ 1.4
LDLRAD3-205ENST00000532490 SLC4A1APQ9BWU0 796 aaKnown RBP23.76■■□□□ 1.39
LDLRAD3-205ENST00000532490 NRXN3Q9Y4C0 1643 aa23.75■■□□□ 1.39
LDLRAD3-205ENST00000532490 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
LDLRAD3-205ENST00000532490 ILDR2Q71H61 639 aa23.74■■□□□ 1.39
LDLRAD3-205ENST00000532490 FAM135BQ49AJ0 1406 aa23.74■■□□□ 1.39
LDLRAD3-205ENST00000532490 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
LDLRAD3-205ENST00000532490 KIF1BO60333 1816 aa23.73■■□□□ 1.39
LDLRAD3-205ENST00000532490 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
LDLRAD3-205ENST00000532490 PTPRUQ92729 1446 aa23.72■■□□□ 1.39
LDLRAD3-205ENST00000532490 NCOA3Q9Y6Q9 1424 aa23.71■■□□□ 1.39
LDLRAD3-205ENST00000532490 MSH6P52701 1360 aa23.69■■□□□ 1.38
LDLRAD3-205ENST00000532490 AMOTL2Q9Y2J4 779 aa23.68■■□□□ 1.38
LDLRAD3-205ENST00000532490 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
LDLRAD3-205ENST00000532490 FOXD1Q16676 465 aa23.67■■□□□ 1.38
LDLRAD3-205ENST00000532490 METP08581 1390 aa23.65■■□□□ 1.38
LDLRAD3-205ENST00000532490 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
LDLRAD3-205ENST00000532490 MPHOSPH9Q99550 1183 aa23.65■■□□□ 1.38
LDLRAD3-205ENST00000532490 XRN1Q8IZH2 1706 aaKnown RBP23.64■■□□□ 1.38
LDLRAD3-205ENST00000532490 SLAIN2Q9P270 581 aa23.64■■□□□ 1.37
LDLRAD3-205ENST00000532490 RPGRIP1LQ68CZ1 1315 aa23.62■■□□□ 1.37
LDLRAD3-205ENST00000532490 SETD5Q9C0A6 1442 aa23.62■■□□□ 1.37
LDLRAD3-205ENST00000532490 C19orf44Q9H6X5 657 aa23.61■■□□□ 1.37
LDLRAD3-205ENST00000532490 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.6■■□□□ 1.37
LDLRAD3-205ENST00000532490 VGFO15240 615 aaPredicted RBP23.6■■□□□ 1.37
LDLRAD3-205ENST00000532490 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
LDLRAD3-205ENST00000532490 PPLO60437 1756 aa23.58■■□□□ 1.37
LDLRAD3-205ENST00000532490 SETD1AO15047 1707 aaKnown RBP23.57■■□□□ 1.36
LDLRAD3-205ENST00000532490 C14orf37Q86TY3 774 aa23.57■■□□□ 1.36
LDLRAD3-205ENST00000532490 CADPS2Q86UW7 1296 aa23.56■■□□□ 1.36
LDLRAD3-205ENST00000532490 CCDC144AA2RUR9 1427 aa23.56■■□□□ 1.36
LDLRAD3-205ENST00000532490 SPATA31E1Q6ZUB1 1445 aa23.56■■□□□ 1.36
LDLRAD3-205ENST00000532490 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
LDLRAD3-205ENST00000532490 ATF3P18847 181 aa23.53■■□□□ 1.36
LDLRAD3-205ENST00000532490 DCCP43146 1447 aa23.51■■□□□ 1.35
LDLRAD3-205ENST00000532490 SOCS7O14512 581 aa23.51■■□□□ 1.35
LDLRAD3-205ENST00000532490 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
LDLRAD3-205ENST00000532490 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
LDLRAD3-205ENST00000532490 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
LDLRAD3-205ENST00000532490 PRAG1Q86YV5 1406 aa23.48■■□□□ 1.35
LDLRAD3-205ENST00000532490 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
LDLRAD3-205ENST00000532490 PTCH1Q13635 1447 aa23.47■■□□□ 1.35
LDLRAD3-205ENST00000532490 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
LDLRAD3-205ENST00000532490 COL16A1Q07092 1604 aaPredicted RBP23.46■■□□□ 1.35
LDLRAD3-205ENST00000532490 MST1RQ04912 1400 aa23.45■■□□□ 1.34
LDLRAD3-205ENST00000532490 ANKRD30BQ9BXX2 1392 aa23.45■■□□□ 1.34
LDLRAD3-205ENST00000532490 ROBO2Q9HCK4 1378 aa23.45■■□□□ 1.34
LDLRAD3-205ENST00000532490 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
LDLRAD3-205ENST00000532490 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
LDLRAD3-205ENST00000532490 BRINP3Q76B58 766 aa23.44■■□□□ 1.34
LDLRAD3-205ENST00000532490 PHF23Q9BUL5 403 aaPredicted RBP23.44■■□□□ 1.34
LDLRAD3-205ENST00000532490 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
LDLRAD3-205ENST00000532490 JCADQ9P266 1359 aa23.41■■□□□ 1.34
LDLRAD3-205ENST00000532490 HRCP23327 699 aa23.41■■□□□ 1.34
LDLRAD3-205ENST00000532490 PIK3C2GO75747 1445 aa23.39■■□□□ 1.33
LDLRAD3-205ENST00000532490 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
LDLRAD3-205ENST00000532490 NRXN1Q9ULB1 1477 aa23.35■■□□□ 1.33
LDLRAD3-205ENST00000532490 TECPR2O15040 1411 aa23.34■■□□□ 1.33
LDLRAD3-205ENST00000532490 NHSL1Q5SYE7 1610 aa23.34■■□□□ 1.33
LDLRAD3-205ENST00000532490 C1orf167Q5SNV9 1468 aa23.34■■□□□ 1.33
LDLRAD3-205ENST00000532490 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
LDLRAD3-205ENST00000532490 MYOM2P54296 1465 aa23.32■■□□□ 1.32
LDLRAD3-205ENST00000532490 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
LDLRAD3-205ENST00000532490 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
LDLRAD3-205ENST00000532490 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
LDLRAD3-205ENST00000532490 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
LDLRAD3-205ENST00000532490 SPATA31A6Q5VVP1 1343 aa23.31■■□□□ 1.32
LDLRAD3-205ENST00000532490 LRP6O75581 1613 aa23.3■■□□□ 1.32
LDLRAD3-205ENST00000532490 KNDC1Q76NI1 1749 aa23.29■■□□□ 1.32
LDLRAD3-205ENST00000532490 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
LDLRAD3-205ENST00000532490 STK26Q9P289 416 aa23.29■■□□□ 1.32
LDLRAD3-205ENST00000532490 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
LDLRAD3-205ENST00000532490 YTHDC2Q9H6S0 1430 aaKnown RBP23.27■■□□□ 1.32
LDLRAD3-205ENST00000532490 LAMC1P11047 1609 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms