RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 SLC26A8Q96RN1 970 aa34.45■■■■□ 3.11
PPP1CA-207ENST00000532279 LRRC7Q96NW7 1537 aa34.45■■■■□ 3.1
PPP1CA-207ENST00000532279 PPP1R15AO75807 674 aaPredicted RBP34.44■■■■□ 3.1
PPP1CA-207ENST00000532279 HDGFP51858 240 aaKnown RBP34.41■■■■□ 3.1
PPP1CA-207ENST00000532279 SCAF1Q9H7N4 1312 aaKnown RBP34.38■■■■□ 3.09
PPP1CA-207ENST00000532279 NUTM2DQ5VT03 806 aaPredicted RBP34.38■■■■□ 3.09
PPP1CA-207ENST00000532279 PLEKHG1Q9ULL1 1385 aa34.37■■■■□ 3.09
PPP1CA-207ENST00000532279 TOM1O60784 492 aa34.37■■■■□ 3.09
PPP1CA-207ENST00000532279 CLTCL1P53675 1640 aa34.35■■■■□ 3.09
PPP1CA-207ENST00000532279 PIP4K2BP78356 416 aa34.35■■■■□ 3.09
PPP1CA-207ENST00000532279 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.35■■■■□ 3.09
PPP1CA-207ENST00000532279 XIRP1Q702N8 1843 aaKnown RBP34.34■■■■□ 3.09
PPP1CA-207ENST00000532279 TRPM2O94759 1503 aa34.34■■■■□ 3.09
PPP1CA-207ENST00000532279 SLC4A1APQ9BWU0 796 aaKnown RBP34.32■■■■□ 3.08
PPP1CA-207ENST00000532279 KCNA6P17658 529 aa34.31■■■■□ 3.08
PPP1CA-207ENST00000532279 KIF1BO60333 1816 aa34.29■■■■□ 3.08
PPP1CA-207ENST00000532279 ALKQ9UM73 1620 aa34.29■■■■□ 3.08
PPP1CA-207ENST00000532279 ZNF326Q5BKZ1 582 aaKnown RBP34.27■■■■□ 3.08
PPP1CA-207ENST00000532279 NWD1Q149M9 1564 aa34.27■■■■□ 3.08
PPP1CA-207ENST00000532279 CHD2O14647 1828 aaKnown RBP34.25■■■■□ 3.07
PPP1CA-207ENST00000532279 PROSER2Q86WR7 435 aaPredicted RBP34.22■■■■□ 3.07
PPP1CA-207ENST00000532279 TMEM94Q12767 1356 aa34.22■■■■□ 3.07
PPP1CA-207ENST00000532279 ADAMTS13Q76LX8 1427 aa34.21■■■■□ 3.07
PPP1CA-207ENST00000532279 NKTRP30414 1462 aaKnown RBP34.21■■■■□ 3.07
PPP1CA-207ENST00000532279 RBM33Q96EV2 1170 aaKnown RBP34.2■■■■□ 3.07
PPP1CA-207ENST00000532279 TBX22Q9Y458 520 aa34.2■■■■□ 3.07
PPP1CA-207ENST00000532279 DIP2AQ14689 1571 aa34.19■■■■□ 3.06
PPP1CA-207ENST00000532279 FOXD1Q16676 465 aa34.19■■■■□ 3.06
PPP1CA-207ENST00000532279 SETD5Q9C0A6 1442 aa34.16■■■■□ 3.06
PPP1CA-207ENST00000532279 NEXMIFQ5QGS0 1516 aa34.15■■■■□ 3.06
PPP1CA-207ENST00000532279 HSPA1LP34931 641 aa34.15■■■■□ 3.06
PPP1CA-207ENST00000532279 NRXN3Q9Y4C0 1643 aa34.14■■■■□ 3.06
PPP1CA-207ENST00000532279 MPHOSPH9Q99550 1183 aa34.13■■■■□ 3.05
PPP1CA-207ENST00000532279 SETBP1Q9Y6X0 1596 aa34.11■■■■□ 3.05
PPP1CA-207ENST00000532279 PIK3R4Q99570 1358 aa34.07■■■■□ 3.04
PPP1CA-207ENST00000532279 RAB3GAP2Q9H2M9 1393 aa34.05■■■■□ 3.04
PPP1CA-207ENST00000532279 DISP3Q9P2K9 1392 aa34.04■■■■□ 3.04
PPP1CA-207ENST00000532279 MSH6P52701 1360 aa34.03■■■■□ 3.04
PPP1CA-207ENST00000532279 CCDC144AA2RUR9 1427 aa34.03■■■■□ 3.04
PPP1CA-207ENST00000532279 PTPRUQ92729 1446 aa34.03■■■■□ 3.04
PPP1CA-207ENST00000532279 ACIN1Q9UKV3 1341 aaKnown RBP34.02■■■■□ 3.04
PPP1CA-207ENST00000532279 PPLO60437 1756 aa34.01■■■■□ 3.04
PPP1CA-207ENST00000532279 AMOTL2Q9Y2J4 779 aa34.01■■■■□ 3.03
PPP1CA-207ENST00000532279 C14orf37Q86TY3 774 aa33.98■■■■□ 3.03
PPP1CA-207ENST00000532279 METP08581 1390 aa33.98■■■■□ 3.03
PPP1CA-207ENST00000532279 XRN1Q8IZH2 1706 aaKnown RBP33.97■■■■□ 3.03
PPP1CA-207ENST00000532279 VGFO15240 615 aaPredicted RBP33.97■■■■□ 3.03
PPP1CA-207ENST00000532279 RPGRIP1LQ68CZ1 1315 aa33.97■■■■□ 3.03
PPP1CA-207ENST00000532279 ROBO1Q9Y6N7 1651 aa33.94■■■■□ 3.02
PPP1CA-207ENST00000532279 NCOA3Q9Y6Q9 1424 aa33.93■■■■□ 3.02
PPP1CA-207ENST00000532279 FAM135BQ49AJ0 1406 aa33.92■■■■□ 3.02
PPP1CA-207ENST00000532279 RGL3Q3MIN7 710 aa33.91■■■■□ 3.02
PPP1CA-207ENST00000532279 SETD1AO15047 1707 aaKnown RBP33.9■■■■□ 3.02
PPP1CA-207ENST00000532279 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.9■■■■□ 3.02
PPP1CA-207ENST00000532279 SPATA31E1Q6ZUB1 1445 aa33.88■■■■□ 3.01
PPP1CA-207ENST00000532279 SLAIN2Q9P270 581 aa33.87■■■■□ 3.01
PPP1CA-207ENST00000532279 IFT172Q9UG01 1749 aa33.86■■■■□ 3.01
PPP1CA-207ENST00000532279 C19orf44Q9H6X5 657 aa33.84■■■■□ 3.01
PPP1CA-207ENST00000532279 MED1Q15648 1581 aaPredicted RBP33.84■■■■□ 3.01
PPP1CA-207ENST00000532279 ATF3P18847 181 aa33.81■■■■□ 3
PPP1CA-207ENST00000532279 CADPS2Q86UW7 1296 aa33.8■■■■□ 3
PPP1CA-207ENST00000532279 ADGRF5Q8IZF2 1346 aa33.79■■■■□ 3
PPP1CA-207ENST00000532279 ANKRD30BQ9BXX2 1392 aa33.78■■■■□ 3
PPP1CA-207ENST00000532279 PHLPP1O60346 1717 aa33.75■■■□□ 2.99
PPP1CA-207ENST00000532279 NALCNQ8IZF0 1738 aa33.74■■■□□ 2.99
PPP1CA-207ENST00000532279 ILDR2Q71H61 639 aa33.74■■■□□ 2.99
PPP1CA-207ENST00000532279 HRCP23327 699 aa33.73■■■□□ 2.99
PPP1CA-207ENST00000532279 DCCP43146 1447 aa33.71■■■□□ 2.99
PPP1CA-207ENST00000532279 PTCH1Q13635 1447 aa33.7■■■□□ 2.99
PPP1CA-207ENST00000532279 ADGRL3Q9HAR2 1447 aa33.7■■■□□ 2.98
PPP1CA-207ENST00000532279 ROBO2Q9HCK4 1378 aa33.69■■■□□ 2.98
PPP1CA-207ENST00000532279 PIK3C2GO75747 1445 aa33.67■■■□□ 2.98
PPP1CA-207ENST00000532279 MST1RQ04912 1400 aa33.63■■■□□ 2.97
PPP1CA-207ENST00000532279 PRAG1Q86YV5 1406 aa33.63■■■□□ 2.97
PPP1CA-207ENST00000532279 COL16A1Q07092 1604 aaPredicted RBP33.61■■■□□ 2.97
PPP1CA-207ENST00000532279 PHF23Q9BUL5 403 aaPredicted RBP33.61■■■□□ 2.97
PPP1CA-207ENST00000532279 ASXL1Q8IXJ9 1541 aa33.61■■■□□ 2.97
PPP1CA-207ENST00000532279 TMEM132EQ6IEE7 984 aa33.6■■■□□ 2.97
PPP1CA-207ENST00000532279 BRINP3Q76B58 766 aa33.6■■■□□ 2.97
PPP1CA-207ENST00000532279 STK26Q9P289 416 aa33.6■■■□□ 2.97
PPP1CA-207ENST00000532279 MYOM2P54296 1465 aa33.6■■■□□ 2.97
PPP1CA-207ENST00000532279 AHDC1Q5TGY3 1603 aaPredicted RBP33.58■■■□□ 2.97
PPP1CA-207ENST00000532279 NRXN1Q9ULB1 1477 aa33.56■■■□□ 2.96
PPP1CA-207ENST00000532279 KNDC1Q76NI1 1749 aa33.55■■■□□ 2.96
PPP1CA-207ENST00000532279 LRPPRCP42704 1394 aaKnown RBP33.55■■■□□ 2.96
PPP1CA-207ENST00000532279 LAMC1P11047 1609 aa33.53■■■□□ 2.96
PPP1CA-207ENST00000532279 JCADQ9P266 1359 aa33.53■■■□□ 2.96
PPP1CA-207ENST00000532279 C14orf93Q9H972 538 aaKnown RBP33.52■■■□□ 2.96
PPP1CA-207ENST00000532279 TECPR2O15040 1411 aa33.52■■■□□ 2.96
PPP1CA-207ENST00000532279 CFAP70Q5T0N1 1121 aa33.51■■■□□ 2.95
PPP1CA-207ENST00000532279 YTHDC2Q9H6S0 1430 aaKnown RBP33.5■■■□□ 2.95
PPP1CA-207ENST00000532279 NHSL1Q5SYE7 1610 aa33.5■■■□□ 2.95
PPP1CA-207ENST00000532279 ABCC11Q96J66 1382 aa33.49■■■□□ 2.95
PPP1CA-207ENST00000532279 WAPLQ7Z5K2 1190 aa33.49■■■□□ 2.95
PPP1CA-207ENST00000532279 KDM2AQ9Y2K7 1162 aa33.49■■■□□ 2.95
PPP1CA-207ENST00000532279 C1orf167Q5SNV9 1468 aa33.49■■■□□ 2.95
PPP1CA-207ENST00000532279 DCAF11Q8TEB1 546 aa33.47■■■□□ 2.95
PPP1CA-207ENST00000532279 PLEKHH1Q9ULM0 1364 aa33.45■■■□□ 2.94
PPP1CA-207ENST00000532279 CDC42BPGQ6DT37 1551 aa33.44■■■□□ 2.94
PPP1CA-207ENST00000532279 DDX17Q92841 729 aaKnown RBP33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms