RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 ZFYVE9O95405 1425 aa13.6□□□□□ -0.23
NECTIN1-207ENST00000532197 LTKP29376 864 aa13.6□□□□□ -0.23
NECTIN1-207ENST00000532197 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
NECTIN1-207ENST00000532197 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
NECTIN1-207ENST00000532197 HSPA1LP34931 641 aa13.59□□□□□ -0.23
NECTIN1-207ENST00000532197 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
NECTIN1-207ENST00000532197 CLTCL1P53675 1640 aa13.58□□□□□ -0.24
NECTIN1-207ENST00000532197 ALKQ9UM73 1620 aa13.58□□□□□ -0.24
NECTIN1-207ENST00000532197 PIP4K2BP78356 416 aa13.58□□□□□ -0.24
NECTIN1-207ENST00000532197 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.24
NECTIN1-207ENST00000532197 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
NECTIN1-207ENST00000532197 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-207ENST00000532197 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-207ENST00000532197 RIMS2Q9UQ26 1411 aa13.56□□□□□ -0.24
NECTIN1-207ENST00000532197 PLEKHG1Q9ULL1 1385 aa13.55□□□□□ -0.24
NECTIN1-207ENST00000532197 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
NECTIN1-207ENST00000532197 CHD2O14647 1828 aaKnown RBP13.54□□□□□ -0.24
NECTIN1-207ENST00000532197 KCNA6P17658 529 aa13.53□□□□□ -0.24
NECTIN1-207ENST00000532197 HRCP23327 699 aa13.53□□□□□ -0.24
NECTIN1-207ENST00000532197 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
NECTIN1-207ENST00000532197 RAB3GAP2Q9H2M9 1393 aa13.52□□□□□ -0.25
NECTIN1-207ENST00000532197 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
NECTIN1-207ENST00000532197 MED1Q15648 1581 aaPredicted RBP13.52□□□□□ -0.25
NECTIN1-207ENST00000532197 XIRP1Q702N8 1843 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-207ENST00000532197 PPP1R15AO75807 674 aaPredicted RBP13.51□□□□□ -0.25
NECTIN1-207ENST00000532197 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
NECTIN1-207ENST00000532197 NEXMIFQ5QGS0 1516 aa13.5□□□□□ -0.25
NECTIN1-207ENST00000532197 FAM135BQ49AJ0 1406 aa13.5□□□□□ -0.25
NECTIN1-207ENST00000532197 PPLO60437 1756 aa13.5□□□□□ -0.25
NECTIN1-207ENST00000532197 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
NECTIN1-207ENST00000532197 NKTRP30414 1462 aaKnown RBP13.49□□□□□ -0.25
NECTIN1-207ENST00000532197 TBX22Q9Y458 520 aa13.49□□□□□ -0.25
NECTIN1-207ENST00000532197 PIK3R4Q99570 1358 aa13.48□□□□□ -0.25
NECTIN1-207ENST00000532197 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
NECTIN1-207ENST00000532197 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
NECTIN1-207ENST00000532197 TMEM94Q12767 1356 aa13.47□□□□□ -0.25
NECTIN1-207ENST00000532197 NRXN3Q9Y4C0 1643 aa13.47□□□□□ -0.25
NECTIN1-207ENST00000532197 RPGRIP1LQ68CZ1 1315 aa13.47□□□□□ -0.25
NECTIN1-207ENST00000532197 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
NECTIN1-207ENST00000532197 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
NECTIN1-207ENST00000532197 ZNF326Q5BKZ1 582 aaKnown RBP13.46□□□□□ -0.25
NECTIN1-207ENST00000532197 BCANQ96GW7 911 aa13.46□□□□□ -0.25
NECTIN1-207ENST00000532197 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.26
NECTIN1-207ENST00000532197 VGFO15240 615 aaPredicted RBP13.44□□□□□ -0.26
NECTIN1-207ENST00000532197 PROSER2Q86WR7 435 aaPredicted RBP13.44□□□□□ -0.26
NECTIN1-207ENST00000532197 FOXD1Q16676 465 aa13.43□□□□□ -0.26
NECTIN1-207ENST00000532197 SPATA31E1Q6ZUB1 1445 aa13.43□□□□□ -0.26
NECTIN1-207ENST00000532197 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
NECTIN1-207ENST00000532197 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
NECTIN1-207ENST00000532197 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
NECTIN1-207ENST00000532197 MSH6P52701 1360 aa13.42□□□□□ -0.26
NECTIN1-207ENST00000532197 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-207ENST00000532197 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
NECTIN1-207ENST00000532197 SLAIN2Q9P270 581 aa13.37□□□□□ -0.27
NECTIN1-207ENST00000532197 PRAG1Q86YV5 1406 aa13.37□□□□□ -0.27
NECTIN1-207ENST00000532197 LAMC1P11047 1609 aa13.36□□□□□ -0.27
NECTIN1-207ENST00000532197 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
NECTIN1-207ENST00000532197 METP08581 1390 aa13.35□□□□□ -0.27
NECTIN1-207ENST00000532197 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
NECTIN1-207ENST00000532197 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
NECTIN1-207ENST00000532197 AMOTL2Q9Y2J4 779 aa13.35□□□□□ -0.27
NECTIN1-207ENST00000532197 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
NECTIN1-207ENST00000532197 MYOM2P54296 1465 aa13.35□□□□□ -0.27
NECTIN1-207ENST00000532197 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
NECTIN1-207ENST00000532197 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
NECTIN1-207ENST00000532197 RGL3Q3MIN7 710 aa13.33□□□□□ -0.28
NECTIN1-207ENST00000532197 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
NECTIN1-207ENST00000532197 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
NECTIN1-207ENST00000532197 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
NECTIN1-207ENST00000532197 DCCP43146 1447 aa13.32□□□□□ -0.28
NECTIN1-207ENST00000532197 PTCH1Q13635 1447 aa13.32□□□□□ -0.28
NECTIN1-207ENST00000532197 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
NECTIN1-207ENST00000532197 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-207ENST00000532197 JCADQ9P266 1359 aa13.32□□□□□ -0.28
NECTIN1-207ENST00000532197 KNDC1Q76NI1 1749 aa13.31□□□□□ -0.28
NECTIN1-207ENST00000532197 ADGRF5Q8IZF2 1346 aa13.31□□□□□ -0.28
NECTIN1-207ENST00000532197 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
NECTIN1-207ENST00000532197 ATF3P18847 181 aa13.29□□□□□ -0.28
NECTIN1-207ENST00000532197 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
NECTIN1-207ENST00000532197 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
NECTIN1-207ENST00000532197 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
NECTIN1-207ENST00000532197 TECPR2O15040 1411 aa13.28□□□□□ -0.28
NECTIN1-207ENST00000532197 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
NECTIN1-207ENST00000532197 AHDC1Q5TGY3 1603 aaPredicted RBP13.27□□□□□ -0.29
NECTIN1-207ENST00000532197 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
NECTIN1-207ENST00000532197 COL16A1Q07092 1604 aaPredicted RBP13.26□□□□□ -0.29
NECTIN1-207ENST00000532197 ASXL1Q8IXJ9 1541 aa13.26□□□□□ -0.29
NECTIN1-207ENST00000532197 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
NECTIN1-207ENST00000532197 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
NECTIN1-207ENST00000532197 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
NECTIN1-207ENST00000532197 KIAA1210Q9ULL0 1709 aa13.25□□□□□ -0.29
NECTIN1-207ENST00000532197 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
NECTIN1-207ENST00000532197 YTHDC2Q9H6S0 1430 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-207ENST00000532197 POTEAQ6S8J7 498 aa13.23□□□□□ -0.29
NECTIN1-207ENST00000532197 BRINP3Q76B58 766 aa13.23□□□□□ -0.29
NECTIN1-207ENST00000532197 SIRT1Q96EB6 747 aa13.23□□□□□ -0.29
NECTIN1-207ENST00000532197 CDC42BPGQ6DT37 1551 aa13.23□□□□□ -0.29
NECTIN1-207ENST00000532197 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-207ENST00000532197 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
NECTIN1-207ENST00000532197 ADGRB1O14514 1584 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms