RNA–Protein interactions for RNA: ENST00000532195.1

TRIM29-218, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-218ENST00000532195 CLTCL1P53675 1640 aa22.33■■□□□ 1.17
TRIM29-218ENST00000532195 HDGFP51858 240 aaKnown RBP22.32■■□□□ 1.16
TRIM29-218ENST00000532195 FBXO41Q8TF61 875 aa22.32■■□□□ 1.16
TRIM29-218ENST00000532195 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
TRIM29-218ENST00000532195 NUTM2DQ5VT03 806 aaPredicted RBP22.3■■□□□ 1.16
TRIM29-218ENST00000532195 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
TRIM29-218ENST00000532195 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRIM29-218ENST00000532195 BCANQ96GW7 911 aa22.29■■□□□ 1.16
TRIM29-218ENST00000532195 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
TRIM29-218ENST00000532195 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
TRIM29-218ENST00000532195 PLEKHG1Q9ULL1 1385 aa22.26■■□□□ 1.15
TRIM29-218ENST00000532195 HRCP23327 699 aa22.26■■□□□ 1.15
TRIM29-218ENST00000532195 KIF1BO60333 1816 aa22.26■■□□□ 1.15
TRIM29-218ENST00000532195 CPS1P31327 1500 aa22.26■■□□□ 1.15
TRIM29-218ENST00000532195 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
TRIM29-218ENST00000532195 STRCP1A6NGW2 1772 aa22.24■■□□□ 1.15
TRIM29-218ENST00000532195 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
TRIM29-218ENST00000532195 NEXMIFQ5QGS0 1516 aa22.18■■□□□ 1.14
TRIM29-218ENST00000532195 ADAMTS13Q76LX8 1427 aa22.17■■□□□ 1.14
TRIM29-218ENST00000532195 KCNA6P17658 529 aa22.17■■□□□ 1.14
TRIM29-218ENST00000532195 TBX22Q9Y458 520 aa22.17■■□□□ 1.14
TRIM29-218ENST00000532195 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
TRIM29-218ENST00000532195 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
TRIM29-218ENST00000532195 UBAP1LF5GYI3 381 aa22.13■■□□□ 1.13
TRIM29-218ENST00000532195 RGL3Q3MIN7 710 aa22.13■■□□□ 1.13
TRIM29-218ENST00000532195 SPATA31E1Q6ZUB1 1445 aa22.12■■□□□ 1.13
TRIM29-218ENST00000532195 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
TRIM29-218ENST00000532195 NRXN3Q9Y4C0 1643 aa22.11■■□□□ 1.13
TRIM29-218ENST00000532195 VGFO15240 615 aaPredicted RBP22.11■■□□□ 1.13
TRIM29-218ENST00000532195 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
TRIM29-218ENST00000532195 ANKRD30BQ9BXX2 1392 aa22.11■■□□□ 1.13
TRIM29-218ENST00000532195 NWD1Q149M9 1564 aa22.1■■□□□ 1.13
TRIM29-218ENST00000532195 CHD2O14647 1828 aaKnown RBP22.1■■□□□ 1.13
TRIM29-218ENST00000532195 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
TRIM29-218ENST00000532195 PPLO60437 1756 aa22.09■■□□□ 1.13
TRIM29-218ENST00000532195 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
TRIM29-218ENST00000532195 RBM33Q96EV2 1170 aaKnown RBP22.07■■□□□ 1.12
TRIM29-218ENST00000532195 PIK3R4Q99570 1358 aa22.07■■□□□ 1.12
TRIM29-218ENST00000532195 NKTRP30414 1462 aaKnown RBP22.07■■□□□ 1.12
TRIM29-218ENST00000532195 XIRP1Q702N8 1843 aaKnown RBP22.06■■□□□ 1.12
TRIM29-218ENST00000532195 TMEM94Q12767 1356 aa22.06■■□□□ 1.12
TRIM29-218ENST00000532195 TOM1O60784 492 aa22.05■■□□□ 1.12
TRIM29-218ENST00000532195 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
TRIM29-218ENST00000532195 METP08581 1390 aa22.04■■□□□ 1.12
TRIM29-218ENST00000532195 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
TRIM29-218ENST00000532195 ADGRF5Q8IZF2 1346 aa22.03■■□□□ 1.12
TRIM29-218ENST00000532195 IFT172Q9UG01 1749 aa22.01■■□□□ 1.11
TRIM29-218ENST00000532195 PIP4K2BP78356 416 aa22.01■■□□□ 1.11
TRIM29-218ENST00000532195 ALKQ9UM73 1620 aa22■■□□□ 1.11
TRIM29-218ENST00000532195 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
TRIM29-218ENST00000532195 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
TRIM29-218ENST00000532195 XRN1Q8IZH2 1706 aaKnown RBP21.96■■□□□ 1.11
TRIM29-218ENST00000532195 MSH6P52701 1360 aa21.94■■□□□ 1.1
TRIM29-218ENST00000532195 PIK3C2GO75747 1445 aa21.93■■□□□ 1.1
TRIM29-218ENST00000532195 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
TRIM29-218ENST00000532195 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
TRIM29-218ENST00000532195 MYOM2P54296 1465 aa21.91■■□□□ 1.1
TRIM29-218ENST00000532195 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
TRIM29-218ENST00000532195 DCAF11Q8TEB1 546 aa21.89■■□□□ 1.09
TRIM29-218ENST00000532195 KDM2AQ9Y2K7 1162 aa21.89■■□□□ 1.09
TRIM29-218ENST00000532195 C19orf44Q9H6X5 657 aa21.88■■□□□ 1.09
TRIM29-218ENST00000532195 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
TRIM29-218ENST00000532195 TMEM132EQ6IEE7 984 aa21.87■■□□□ 1.09
TRIM29-218ENST00000532195 C14orf93Q9H972 538 aaKnown RBP21.87■■□□□ 1.09
TRIM29-218ENST00000532195 ROBO2Q9HCK4 1378 aa21.87■■□□□ 1.09
TRIM29-218ENST00000532195 HSPA1LP34931 641 aa21.86■■□□□ 1.09
TRIM29-218ENST00000532195 CFAP70Q5T0N1 1121 aa21.86■■□□□ 1.09
TRIM29-218ENST00000532195 STK26Q9P289 416 aa21.85■■□□□ 1.09
TRIM29-218ENST00000532195 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
TRIM29-218ENST00000532195 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.85■■□□□ 1.09
TRIM29-218ENST00000532195 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
TRIM29-218ENST00000532195 SLAIN2Q9P270 581 aa21.84■■□□□ 1.09
TRIM29-218ENST00000532195 PRAG1Q86YV5 1406 aa21.83■■□□□ 1.09
TRIM29-218ENST00000532195 ATF3P18847 181 aa21.83■■□□□ 1.09
TRIM29-218ENST00000532195 STAC3Q96MF2 364 aa21.83■■□□□ 1.09
TRIM29-218ENST00000532195 FAM135BQ49AJ0 1406 aa21.82■■□□□ 1.08
TRIM29-218ENST00000532195 CADPS2Q86UW7 1296 aa21.82■■□□□ 1.08
TRIM29-218ENST00000532195 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
TRIM29-218ENST00000532195 LRPPRCP42704 1394 aaKnown RBP21.82■■□□□ 1.08
TRIM29-218ENST00000532195 LAMC1P11047 1609 aa21.8■■□□□ 1.08
TRIM29-218ENST00000532195 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
TRIM29-218ENST00000532195 ADGRL3Q9HAR2 1447 aa21.8■■□□□ 1.08
TRIM29-218ENST00000532195 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
TRIM29-218ENST00000532195 TECPR2O15040 1411 aa21.79■■□□□ 1.08
TRIM29-218ENST00000532195 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
TRIM29-218ENST00000532195 DCCP43146 1447 aa21.78■■□□□ 1.08
TRIM29-218ENST00000532195 ROBO1Q9Y6N7 1651 aa21.78■■□□□ 1.08
TRIM29-218ENST00000532195 NALCNQ8IZF0 1738 aa21.77■■□□□ 1.08
TRIM29-218ENST00000532195 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
TRIM29-218ENST00000532195 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
TRIM29-218ENST00000532195 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
TRIM29-218ENST00000532195 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
TRIM29-218ENST00000532195 L3MBTL2Q969R5 705 aa21.73■■□□□ 1.07
TRIM29-218ENST00000532195 ADGRB1O14514 1584 aa21.73■■□□□ 1.07
TRIM29-218ENST00000532195 SIRT1Q96EB6 747 aa21.72■■□□□ 1.07
TRIM29-218ENST00000532195 MST1RQ04912 1400 aa21.72■■□□□ 1.07
TRIM29-218ENST00000532195 BRINP3Q76B58 766 aa21.69■■□□□ 1.06
TRIM29-218ENST00000532195 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
TRIM29-218ENST00000532195 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
TRIM29-218ENST00000532195 DLC1Q96QB1 1528 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms