RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 RIMS2Q9UQ26 1411 aa30.59■■■□□ 2.49
CCS-207ENST00000531990 ZNF326Q5BKZ1 582 aaKnown RBP30.58■■■□□ 2.49
CCS-207ENST00000531990 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.57■■■□□ 2.48
CCS-207ENST00000531990 ZFYVE9O95405 1425 aa30.56■■■□□ 2.48
CCS-207ENST00000531990 PPP1R15AO75807 674 aaPredicted RBP30.56■■■□□ 2.48
CCS-207ENST00000531990 ILDR1Q86SU0 546 aaPredicted RBP30.55■■■□□ 2.48
CCS-207ENST00000531990 BCANQ96GW7 911 aa30.5■■■□□ 2.47
CCS-207ENST00000531990 ANKRD30BQ9BXX2 1392 aa30.48■■■□□ 2.47
CCS-207ENST00000531990 PLEKHG1Q9ULL1 1385 aa30.46■■■□□ 2.47
CCS-207ENST00000531990 NUTM2DQ5VT03 806 aaPredicted RBP30.46■■■□□ 2.47
CCS-207ENST00000531990 NEXMIFQ5QGS0 1516 aa30.44■■■□□ 2.46
CCS-207ENST00000531990 RPGRIP1LQ68CZ1 1315 aa30.44■■■□□ 2.46
CCS-207ENST00000531990 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
CCS-207ENST00000531990 SPATA31E1Q6ZUB1 1445 aa30.41■■■□□ 2.46
CCS-207ENST00000531990 ZNF335Q9H4Z2 1342 aaPredicted RBP30.41■■■□□ 2.46
CCS-207ENST00000531990 RGL3Q3MIN7 710 aa30.4■■■□□ 2.46
CCS-207ENST00000531990 SENP3Q9H4L4 574 aaPredicted RBP30.39■■■□□ 2.46
CCS-207ENST00000531990 PPLO60437 1756 aa30.38■■■□□ 2.45
CCS-207ENST00000531990 VGFO15240 615 aaPredicted RBP30.38■■■□□ 2.45
CCS-207ENST00000531990 SLC26A8Q96RN1 970 aa30.38■■■□□ 2.45
CCS-207ENST00000531990 LTBP4Q8N2S1 1624 aa30.36■■■□□ 2.45
CCS-207ENST00000531990 DIP2AQ14689 1571 aa30.33■■■□□ 2.45
CCS-207ENST00000531990 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
CCS-207ENST00000531990 IFT172Q9UG01 1749 aa30.32■■■□□ 2.44
CCS-207ENST00000531990 SETBP1Q9Y6X0 1596 aa30.32■■■□□ 2.44
CCS-207ENST00000531990 CPS1P31327 1500 aa30.32■■■□□ 2.44
CCS-207ENST00000531990 CERKQ8TCT0 537 aa30.31■■■□□ 2.44
CCS-207ENST00000531990 TBX22Q9Y458 520 aa30.31■■■□□ 2.44
CCS-207ENST00000531990 ADAMTS13Q76LX8 1427 aa30.3■■■□□ 2.44
CCS-207ENST00000531990 NRXN3Q9Y4C0 1643 aa30.27■■■□□ 2.44
CCS-207ENST00000531990 STRCP1A6NGW2 1772 aa30.26■■■□□ 2.44
CCS-207ENST00000531990 KCNA6P17658 529 aa30.23■■■□□ 2.43
CCS-207ENST00000531990 PIK3R4Q99570 1358 aa30.23■■■□□ 2.43
CCS-207ENST00000531990 CHD2O14647 1828 aaKnown RBP30.22■■■□□ 2.43
CCS-207ENST00000531990 NWD1Q149M9 1564 aa30.2■■■□□ 2.43
CCS-207ENST00000531990 IQSEC2Q5JU85 1478 aa30.2■■■□□ 2.43
CCS-207ENST00000531990 ADGRF5Q8IZF2 1346 aa30.2■■■□□ 2.42
CCS-207ENST00000531990 MYOM2P54296 1465 aa30.19■■■□□ 2.42
CCS-207ENST00000531990 NKTRP30414 1462 aaKnown RBP30.17■■■□□ 2.42
CCS-207ENST00000531990 ALKQ9UM73 1620 aa30.16■■■□□ 2.42
CCS-207ENST00000531990 STAC3Q96MF2 364 aa30.16■■■□□ 2.42
CCS-207ENST00000531990 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
CCS-207ENST00000531990 LRRC7Q96NW7 1537 aa30.15■■■□□ 2.42
CCS-207ENST00000531990 SIN3AQ96ST3 1273 aa30.14■■■□□ 2.42
CCS-207ENST00000531990 PIK3C2GO75747 1445 aa30.13■■■□□ 2.41
CCS-207ENST00000531990 SETD1AO15047 1707 aaKnown RBP30.13■■■□□ 2.41
CCS-207ENST00000531990 NEUROD1Q13562 356 aa30.12■■■□□ 2.41
CCS-207ENST00000531990 PROSER2Q86WR7 435 aaPredicted RBP30.12■■■□□ 2.41
CCS-207ENST00000531990 KDM2AQ9Y2K7 1162 aa30.12■■■□□ 2.41
CCS-207ENST00000531990 METP08581 1390 aa30.12■■■□□ 2.41
CCS-207ENST00000531990 FBXO41Q8TF61 875 aa30.11■■■□□ 2.41
CCS-207ENST00000531990 NRXN1Q9ULB1 1477 aa30.11■■■□□ 2.41
CCS-207ENST00000531990 AMOTL2Q9Y2J4 779 aa30.1■■■□□ 2.41
CCS-207ENST00000531990 LAMC1P11047 1609 aa30.08■■■□□ 2.41
CCS-207ENST00000531990 PTPRUQ92729 1446 aa30.08■■■□□ 2.41
CCS-207ENST00000531990 XRN1Q8IZH2 1706 aaKnown RBP30.08■■■□□ 2.41
CCS-207ENST00000531990 TMEM94Q12767 1356 aa30.05■■■□□ 2.4
CCS-207ENST00000531990 XIRP1Q702N8 1843 aaKnown RBP30.05■■■□□ 2.4
CCS-207ENST00000531990 C14orf93Q9H972 538 aaKnown RBP30.04■■■□□ 2.4
CCS-207ENST00000531990 CFAP70Q5T0N1 1121 aa30■■■□□ 2.39
CCS-207ENST00000531990 UBAP1LF5GYI3 381 aa29.99■■■□□ 2.39
CCS-207ENST00000531990 L3MBTL2Q969R5 705 aa29.99■■■□□ 2.39
CCS-207ENST00000531990 RBM33Q96EV2 1170 aaKnown RBP29.98■■■□□ 2.39
CCS-207ENST00000531990 C14orf37Q86TY3 774 aa29.97■■■□□ 2.39
CCS-207ENST00000531990 NCOA3Q9Y6Q9 1424 aa29.96■■■□□ 2.39
CCS-207ENST00000531990 TMEM132EQ6IEE7 984 aa29.96■■■□□ 2.39
CCS-207ENST00000531990 ASXL1Q8IXJ9 1541 aa29.96■■■□□ 2.39
CCS-207ENST00000531990 TONSLQ96HA7 1378 aa29.95■■■□□ 2.39
CCS-207ENST00000531990 TOM1O60784 492 aa29.95■■■□□ 2.39
CCS-207ENST00000531990 CLSPNQ9HAW4 1339 aa29.95■■■□□ 2.38
CCS-207ENST00000531990 MSH6P52701 1360 aa29.94■■■□□ 2.38
CCS-207ENST00000531990 PTCH1Q13635 1447 aa29.94■■■□□ 2.38
CCS-207ENST00000531990 LRPPRCP42704 1394 aaKnown RBP29.93■■■□□ 2.38
CCS-207ENST00000531990 STK26Q9P289 416 aa29.93■■■□□ 2.38
CCS-207ENST00000531990 PRAG1Q86YV5 1406 aa29.93■■■□□ 2.38
CCS-207ENST00000531990 YTHDC2Q9H6S0 1430 aaKnown RBP29.92■■■□□ 2.38
CCS-207ENST00000531990 KNDC1Q76NI1 1749 aa29.91■■■□□ 2.38
CCS-207ENST00000531990 CCER1Q8TC90 406 aaPredicted RBP29.91■■■□□ 2.38
CCS-207ENST00000531990 KIAA1210Q9ULL0 1709 aa29.9■■■□□ 2.38
CCS-207ENST00000531990 ABCC11Q96J66 1382 aa29.89■■■□□ 2.37
CCS-207ENST00000531990 ROBO2Q9HCK4 1378 aa29.89■■■□□ 2.37
CCS-207ENST00000531990 TECPR2O15040 1411 aa29.88■■■□□ 2.37
CCS-207ENST00000531990 ADGRB1O14514 1584 aa29.86■■■□□ 2.37
CCS-207ENST00000531990 C19orf44Q9H6X5 657 aa29.86■■■□□ 2.37
CCS-207ENST00000531990 SCAF1Q9H7N4 1312 aaKnown RBP29.84■■■□□ 2.37
CCS-207ENST00000531990 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.84■■■□□ 2.37
CCS-207ENST00000531990 ADGRL3Q9HAR2 1447 aa29.82■■■□□ 2.36
CCS-207ENST00000531990 ATF3P18847 181 aa29.82■■■□□ 2.36
CCS-207ENST00000531990 PIP4K2BP78356 416 aa29.82■■■□□ 2.36
CCS-207ENST00000531990 NALCNQ8IZF0 1738 aa29.81■■■□□ 2.36
CCS-207ENST00000531990 CADPS2Q86UW7 1296 aa29.8■■■□□ 2.36
CCS-207ENST00000531990 SIRT1Q96EB6 747 aa29.8■■■□□ 2.36
CCS-207ENST00000531990 FAM135BQ49AJ0 1406 aa29.79■■■□□ 2.36
CCS-207ENST00000531990 DLC1Q96QB1 1528 aa29.79■■■□□ 2.36
CCS-207ENST00000531990 DCCP43146 1447 aa29.79■■■□□ 2.36
CCS-207ENST00000531990 WAPLQ7Z5K2 1190 aa29.77■■■□□ 2.36
CCS-207ENST00000531990 TRPM1Q7Z4N2 1603 aa29.77■■■□□ 2.36
CCS-207ENST00000531990 TRAK1Q9UPV9 953 aa29.76■■■□□ 2.35
CCS-207ENST00000531990 POGKQ9P215 609 aa29.75■■■□□ 2.35
CCS-207ENST00000531990 NBPF1Q3BBV0 1214 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms