RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
GPATCH4-216ENST00000531900 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
GPATCH4-216ENST00000531900 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
GPATCH4-216ENST00000531900 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
GPATCH4-216ENST00000531900 HDGFP51858 240 aaKnown RBP16.12■□□□□ 0.17
GPATCH4-216ENST00000531900 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
GPATCH4-216ENST00000531900 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
GPATCH4-216ENST00000531900 RIMS2Q9UQ26 1411 aa16.1■□□□□ 0.17
GPATCH4-216ENST00000531900 CLTCL1P53675 1640 aa16.09■□□□□ 0.17
GPATCH4-216ENST00000531900 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
GPATCH4-216ENST00000531900 KIF1BO60333 1816 aa16.08■□□□□ 0.17
GPATCH4-216ENST00000531900 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
GPATCH4-216ENST00000531900 LRRC7Q96NW7 1537 aa16.06■□□□□ 0.16
GPATCH4-216ENST00000531900 BCANQ96GW7 911 aa16.06■□□□□ 0.16
GPATCH4-216ENST00000531900 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
GPATCH4-216ENST00000531900 HSPA1LP34931 641 aa16.04■□□□□ 0.16
GPATCH4-216ENST00000531900 STRCP1A6NGW2 1772 aa16.04■□□□□ 0.16
GPATCH4-216ENST00000531900 TBX22Q9Y458 520 aa16.03■□□□□ 0.16
GPATCH4-216ENST00000531900 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.16
GPATCH4-216ENST00000531900 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
GPATCH4-216ENST00000531900 KCNA6P17658 529 aa16.02■□□□□ 0.16
GPATCH4-216ENST00000531900 FOXD1Q16676 465 aa16.02■□□□□ 0.16
GPATCH4-216ENST00000531900 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.16
GPATCH4-216ENST00000531900 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
GPATCH4-216ENST00000531900 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
GPATCH4-216ENST00000531900 ADAMTS13Q76LX8 1427 aa16.01■□□□□ 0.15
GPATCH4-216ENST00000531900 SPATA31E1Q6ZUB1 1445 aa16■□□□□ 0.15
GPATCH4-216ENST00000531900 DIP2AQ14689 1571 aa16■□□□□ 0.15
GPATCH4-216ENST00000531900 PIK3R4Q99570 1358 aa16■□□□□ 0.15
GPATCH4-216ENST00000531900 CHD2O14647 1828 aaKnown RBP15.99■□□□□ 0.15
GPATCH4-216ENST00000531900 SETBP1Q9Y6X0 1596 aa15.99■□□□□ 0.15
GPATCH4-216ENST00000531900 NWD1Q149M9 1564 aa15.98■□□□□ 0.15
GPATCH4-216ENST00000531900 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
GPATCH4-216ENST00000531900 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
GPATCH4-216ENST00000531900 ZNF326Q5BKZ1 582 aaKnown RBP15.97■□□□□ 0.15
GPATCH4-216ENST00000531900 ILDR2Q71H61 639 aa15.97■□□□□ 0.15
GPATCH4-216ENST00000531900 NRXN3Q9Y4C0 1643 aa15.97■□□□□ 0.15
GPATCH4-216ENST00000531900 PPLO60437 1756 aa15.96■□□□□ 0.15
GPATCH4-216ENST00000531900 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
GPATCH4-216ENST00000531900 TMEM94Q12767 1356 aa15.96■□□□□ 0.15
GPATCH4-216ENST00000531900 ALKQ9UM73 1620 aa15.95■□□□□ 0.14
GPATCH4-216ENST00000531900 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
GPATCH4-216ENST00000531900 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
GPATCH4-216ENST00000531900 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
GPATCH4-216ENST00000531900 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
GPATCH4-216ENST00000531900 IFT172Q9UG01 1749 aa15.93■□□□□ 0.14
GPATCH4-216ENST00000531900 TRIM26Q12899 539 aaPredicted RBP15.92■□□□□ 0.14
GPATCH4-216ENST00000531900 NCOA3Q9Y6Q9 1424 aa15.91■□□□□ 0.14
GPATCH4-216ENST00000531900 SOCS7O14512 581 aa15.9■□□□□ 0.14
GPATCH4-216ENST00000531900 RBM33Q96EV2 1170 aaKnown RBP15.9■□□□□ 0.14
GPATCH4-216ENST00000531900 MSH6P52701 1360 aa15.89■□□□□ 0.13
GPATCH4-216ENST00000531900 SETD1AO15047 1707 aaKnown RBP15.89■□□□□ 0.13
GPATCH4-216ENST00000531900 FAM135BQ49AJ0 1406 aa15.89■□□□□ 0.13
GPATCH4-216ENST00000531900 PRAG1Q86YV5 1406 aa15.87■□□□□ 0.13
GPATCH4-216ENST00000531900 PTPRUQ92729 1446 aa15.87■□□□□ 0.13
GPATCH4-216ENST00000531900 STAC3Q96MF2 364 aa15.87■□□□□ 0.13
GPATCH4-216ENST00000531900 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
GPATCH4-216ENST00000531900 XRN1Q8IZH2 1706 aaKnown RBP15.87■□□□□ 0.13
GPATCH4-216ENST00000531900 METP08581 1390 aa15.87■□□□□ 0.13
GPATCH4-216ENST00000531900 NRXN1Q9ULB1 1477 aa15.86■□□□□ 0.13
GPATCH4-216ENST00000531900 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
GPATCH4-216ENST00000531900 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
GPATCH4-216ENST00000531900 AMOTL2Q9Y2J4 779 aa15.86■□□□□ 0.13
GPATCH4-216ENST00000531900 MED1Q15648 1581 aaPredicted RBP15.86■□□□□ 0.13
GPATCH4-216ENST00000531900 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
GPATCH4-216ENST00000531900 MYOM2P54296 1465 aa15.84■□□□□ 0.13
GPATCH4-216ENST00000531900 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
GPATCH4-216ENST00000531900 PIK3C2GO75747 1445 aa15.84■□□□□ 0.13
GPATCH4-216ENST00000531900 C19orf44Q9H6X5 657 aa15.81■□□□□ 0.12
GPATCH4-216ENST00000531900 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
GPATCH4-216ENST00000531900 ATF3P18847 181 aa15.8■□□□□ 0.12
GPATCH4-216ENST00000531900 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
GPATCH4-216ENST00000531900 C14orf93Q9H972 538 aaKnown RBP15.8■□□□□ 0.12
GPATCH4-216ENST00000531900 DHX57Q6P158 1386 aaKnown RBP15.79■□□□□ 0.12
GPATCH4-216ENST00000531900 TECPR2O15040 1411 aa15.78■□□□□ 0.12
GPATCH4-216ENST00000531900 ROBO1Q9Y6N7 1651 aa15.78■□□□□ 0.12
GPATCH4-216ENST00000531900 LAMC1P11047 1609 aa15.78■□□□□ 0.12
GPATCH4-216ENST00000531900 DCCP43146 1447 aa15.77■□□□□ 0.11
GPATCH4-216ENST00000531900 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
GPATCH4-216ENST00000531900 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.76■□□□□ 0.11
GPATCH4-216ENST00000531900 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
GPATCH4-216ENST00000531900 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
GPATCH4-216ENST00000531900 SIRT1Q96EB6 747 aa15.75■□□□□ 0.11
GPATCH4-216ENST00000531900 ROBO2Q9HCK4 1378 aa15.75■□□□□ 0.11
GPATCH4-216ENST00000531900 DCAF11Q8TEB1 546 aa15.74■□□□□ 0.11
GPATCH4-216ENST00000531900 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
GPATCH4-216ENST00000531900 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
GPATCH4-216ENST00000531900 YTHDC2Q9H6S0 1430 aaKnown RBP15.72■□□□□ 0.11
GPATCH4-216ENST00000531900 CFAP70Q5T0N1 1121 aa15.72■□□□□ 0.11
GPATCH4-216ENST00000531900 JCADQ9P266 1359 aa15.72■□□□□ 0.11
GPATCH4-216ENST00000531900 ADGRB1O14514 1584 aa15.7■□□□□ 0.1
GPATCH4-216ENST00000531900 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
GPATCH4-216ENST00000531900 PHLPP1O60346 1717 aa15.7■□□□□ 0.1
GPATCH4-216ENST00000531900 NALCNQ8IZF0 1738 aa15.7■□□□□ 0.1
GPATCH4-216ENST00000531900 KIAA1210Q9ULL0 1709 aa15.69■□□□□ 0.1
GPATCH4-216ENST00000531900 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
GPATCH4-216ENST00000531900 KDM2AQ9Y2K7 1162 aa15.68■□□□□ 0.1
GPATCH4-216ENST00000531900 DLC1Q96QB1 1528 aa15.68■□□□□ 0.1
GPATCH4-216ENST00000531900 SIN3AQ96ST3 1273 aa15.67■□□□□ 0.1
GPATCH4-216ENST00000531900 RGS17Q9UGC6 210 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms