RNA–Protein interactions for RNA: ENST00000531478.5

ABCA7-215, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 725 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-215ENST00000531478 TMEM131LA2VDJ0 1609 aa29.85■■■□□ 2.37
ABCA7-215ENST00000531478 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
ABCA7-215ENST00000531478 SPHKAPQ2M3C7 1700 aa29.83■■■□□ 2.37
ABCA7-215ENST00000531478 TOM1O60784 492 aa29.82■■■□□ 2.36
ABCA7-215ENST00000531478 FOXD1Q16676 465 aa29.82■■■□□ 2.36
ABCA7-215ENST00000531478 SCAF1Q9H7N4 1312 aaKnown RBP29.81■■■□□ 2.36
ABCA7-215ENST00000531478 RIMS2Q9UQ26 1411 aa29.8■■■□□ 2.36
ABCA7-215ENST00000531478 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.8■■■□□ 2.36
ABCA7-215ENST00000531478 ACIN1Q9UKV3 1341 aaKnown RBP29.79■■■□□ 2.36
ABCA7-215ENST00000531478 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
ABCA7-215ENST00000531478 SLC26A8Q96RN1 970 aa29.79■■■□□ 2.36
ABCA7-215ENST00000531478 HRCP23327 699 aa29.78■■■□□ 2.36
ABCA7-215ENST00000531478 SENP3Q9H4L4 574 aaPredicted RBP29.77■■■□□ 2.36
ABCA7-215ENST00000531478 LRRC7Q96NW7 1537 aa29.76■■■□□ 2.35
ABCA7-215ENST00000531478 ZFYVE9O95405 1425 aa29.75■■■□□ 2.35
ABCA7-215ENST00000531478 PIP4K2BP78356 416 aa29.75■■■□□ 2.35
ABCA7-215ENST00000531478 PLEKHG1Q9ULL1 1385 aa29.73■■■□□ 2.35
ABCA7-215ENST00000531478 KCNA6P17658 529 aa29.7■■■□□ 2.35
ABCA7-215ENST00000531478 ZNF326Q5BKZ1 582 aaKnown RBP29.7■■■□□ 2.35
ABCA7-215ENST00000531478 NUTM2DQ5VT03 806 aaPredicted RBP29.7■■■□□ 2.35
ABCA7-215ENST00000531478 KIF1BO60333 1816 aa29.67■■■□□ 2.34
ABCA7-215ENST00000531478 PROSER2Q86WR7 435 aaPredicted RBP29.65■■■□□ 2.34
ABCA7-215ENST00000531478 TRPM2O94759 1503 aa29.65■■■□□ 2.34
ABCA7-215ENST00000531478 CLTCL1P53675 1640 aa29.63■■■□□ 2.33
ABCA7-215ENST00000531478 XIRP1Q702N8 1843 aaKnown RBP29.62■■■□□ 2.33
ABCA7-215ENST00000531478 TBX22Q9Y458 520 aa29.62■■■□□ 2.33
ABCA7-215ENST00000531478 CHD2O14647 1828 aaKnown RBP29.6■■■□□ 2.33
ABCA7-215ENST00000531478 NKTRP30414 1462 aaKnown RBP29.59■■■□□ 2.33
ABCA7-215ENST00000531478 NWD1Q149M9 1564 aa29.59■■■□□ 2.33
ABCA7-215ENST00000531478 TMEM94Q12767 1356 aa29.58■■■□□ 2.33
ABCA7-215ENST00000531478 DIP2AQ14689 1571 aa29.58■■■□□ 2.33
ABCA7-215ENST00000531478 HSPA1LP34931 641 aa29.54■■■□□ 2.32
ABCA7-215ENST00000531478 RBM33Q96EV2 1170 aaKnown RBP29.52■■■□□ 2.32
ABCA7-215ENST00000531478 CCDC144AA2RUR9 1427 aa29.52■■■□□ 2.32
ABCA7-215ENST00000531478 ADAMTS13Q76LX8 1427 aa29.52■■■□□ 2.32
ABCA7-215ENST00000531478 ALKQ9UM73 1620 aa29.52■■■□□ 2.32
ABCA7-215ENST00000531478 PIK3R4Q99570 1358 aa29.5■■■□□ 2.31
ABCA7-215ENST00000531478 DISP3Q9P2K9 1392 aa29.5■■■□□ 2.31
ABCA7-215ENST00000531478 ANKRD30BQ9BXX2 1392 aa29.49■■■□□ 2.31
ABCA7-215ENST00000531478 C14orf37Q86TY3 774 aa29.48■■■□□ 2.31
ABCA7-215ENST00000531478 MSH6P52701 1360 aa29.48■■■□□ 2.31
ABCA7-215ENST00000531478 NEXMIFQ5QGS0 1516 aa29.47■■■□□ 2.31
ABCA7-215ENST00000531478 RGL3Q3MIN7 710 aa29.46■■■□□ 2.31
ABCA7-215ENST00000531478 SETBP1Q9Y6X0 1596 aa29.46■■■□□ 2.31
ABCA7-215ENST00000531478 VGFO15240 615 aaPredicted RBP29.45■■■□□ 2.31
ABCA7-215ENST00000531478 RPGRIP1LQ68CZ1 1315 aa29.44■■■□□ 2.3
ABCA7-215ENST00000531478 AMOTL2Q9Y2J4 779 aa29.43■■■□□ 2.3
ABCA7-215ENST00000531478 NRXN3Q9Y4C0 1643 aa29.42■■■□□ 2.3
ABCA7-215ENST00000531478 PCGF6Q9BYE7 350 aa29.42■■■□□ 2.3
ABCA7-215ENST00000531478 SPATA31E1Q6ZUB1 1445 aa29.4■■■□□ 2.3
ABCA7-215ENST00000531478 NCOA3Q9Y6Q9 1424 aa29.38■■■□□ 2.29
ABCA7-215ENST00000531478 PPLO60437 1756 aa29.36■■■□□ 2.29
ABCA7-215ENST00000531478 FAM135BQ49AJ0 1406 aa29.36■■■□□ 2.29
ABCA7-215ENST00000531478 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
ABCA7-215ENST00000531478 SLAIN2Q9P270 581 aa29.33■■■□□ 2.29
ABCA7-215ENST00000531478 ROBO1Q9Y6N7 1651 aa29.33■■■□□ 2.29
ABCA7-215ENST00000531478 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
ABCA7-215ENST00000531478 METP08581 1390 aa29.32■■■□□ 2.28
ABCA7-215ENST00000531478 ATF3P18847 181 aa29.32■■■□□ 2.28
ABCA7-215ENST00000531478 C19orf44Q9H6X5 657 aa29.32■■■□□ 2.28
ABCA7-215ENST00000531478 DHX57Q6P158 1386 aaKnown RBP29.3■■■□□ 2.28
ABCA7-215ENST00000531478 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.29■■■□□ 2.28
ABCA7-215ENST00000531478 CADPS2Q86UW7 1296 aa29.29■■■□□ 2.28
ABCA7-215ENST00000531478 ADGRF5Q8IZF2 1346 aa29.28■■■□□ 2.28
ABCA7-215ENST00000531478 SIN3AQ96ST3 1273 aa29.24■■■□□ 2.27
ABCA7-215ENST00000531478 MED1Q15648 1581 aaPredicted RBP29.23■■■□□ 2.27
ABCA7-215ENST00000531478 SETD1AO15047 1707 aaKnown RBP29.22■■■□□ 2.27
ABCA7-215ENST00000531478 IFT172Q9UG01 1749 aa29.21■■■□□ 2.27
ABCA7-215ENST00000531478 KDM2AQ9Y2K7 1162 aa29.2■■■□□ 2.26
ABCA7-215ENST00000531478 PHLPP1O60346 1717 aa29.2■■■□□ 2.26
ABCA7-215ENST00000531478 DCAF11Q8TEB1 546 aa29.19■■■□□ 2.26
ABCA7-215ENST00000531478 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
ABCA7-215ENST00000531478 NEUROD1Q13562 356 aa29.17■■■□□ 2.26
ABCA7-215ENST00000531478 DCCP43146 1447 aa29.17■■■□□ 2.26
ABCA7-215ENST00000531478 ADGRL3Q9HAR2 1447 aa29.14■■■□□ 2.26
ABCA7-215ENST00000531478 PTCH1Q13635 1447 aa29.12■■■□□ 2.25
ABCA7-215ENST00000531478 ILDR2Q71H61 639 aa29.12■■■□□ 2.25
ABCA7-215ENST00000531478 NALCNQ8IZF0 1738 aa29.11■■■□□ 2.25
ABCA7-215ENST00000531478 ROBO2Q9HCK4 1378 aa29.09■■■□□ 2.25
ABCA7-215ENST00000531478 PIK3C2GO75747 1445 aa29.09■■■□□ 2.25
ABCA7-215ENST00000531478 CFAP70Q5T0N1 1121 aa29.08■■■□□ 2.25
ABCA7-215ENST00000531478 TMEM132EQ6IEE7 984 aa29.08■■■□□ 2.25
ABCA7-215ENST00000531478 C14orf93Q9H972 538 aaKnown RBP29.08■■■□□ 2.25
ABCA7-215ENST00000531478 STK26Q9P289 416 aa29.08■■■□□ 2.25
ABCA7-215ENST00000531478 MYOM2P54296 1465 aa29.08■■■□□ 2.25
ABCA7-215ENST00000531478 NRXN1Q9ULB1 1477 aa29.07■■■□□ 2.24
ABCA7-215ENST00000531478 BRINP3Q76B58 766 aa29.05■■■□□ 2.24
ABCA7-215ENST00000531478 L3MBTL2Q969R5 705 aa29.05■■■□□ 2.24
ABCA7-215ENST00000531478 STAC3Q96MF2 364 aa29.05■■■□□ 2.24
ABCA7-215ENST00000531478 MST1RQ04912 1400 aa29.04■■■□□ 2.24
ABCA7-215ENST00000531478 PRAG1Q86YV5 1406 aa29.04■■■□□ 2.24
ABCA7-215ENST00000531478 JCADQ9P266 1359 aa29.04■■■□□ 2.24
ABCA7-215ENST00000531478 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
ABCA7-215ENST00000531478 LAMC1P11047 1609 aa29.02■■■□□ 2.24
ABCA7-215ENST00000531478 COL16A1Q07092 1604 aaPredicted RBP29.02■■■□□ 2.24
ABCA7-215ENST00000531478 LRPPRCP42704 1394 aaKnown RBP29.01■■■□□ 2.23
ABCA7-215ENST00000531478 ASXL1Q8IXJ9 1541 aa28.99■■■□□ 2.23
ABCA7-215ENST00000531478 KNDC1Q76NI1 1749 aa28.97■■■□□ 2.23
ABCA7-215ENST00000531478 ABCC11Q96J66 1382 aa28.97■■■□□ 2.23
ABCA7-215ENST00000531478 YTHDC2Q9H6S0 1430 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms