RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
SYVN1-213ENST00000531018 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
SYVN1-213ENST00000531018 KIF1BO60333 1816 aa13.74□□□□□ -0.21
SYVN1-213ENST00000531018 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
SYVN1-213ENST00000531018 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
SYVN1-213ENST00000531018 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
SYVN1-213ENST00000531018 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
SYVN1-213ENST00000531018 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
SYVN1-213ENST00000531018 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
SYVN1-213ENST00000531018 FOXD1Q16676 465 aa13.7□□□□□ -0.22
SYVN1-213ENST00000531018 CPS1P31327 1500 aa13.69□□□□□ -0.22
SYVN1-213ENST00000531018 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
SYVN1-213ENST00000531018 NEXMIFQ5QGS0 1516 aa13.69□□□□□ -0.22
SYVN1-213ENST00000531018 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
SYVN1-213ENST00000531018 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYVN1-213ENST00000531018 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
SYVN1-213ENST00000531018 SOCS7O14512 581 aa13.67□□□□□ -0.22
SYVN1-213ENST00000531018 NRXN3Q9Y4C0 1643 aa13.67□□□□□ -0.22
SYVN1-213ENST00000531018 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
SYVN1-213ENST00000531018 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
SYVN1-213ENST00000531018 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
SYVN1-213ENST00000531018 PPLO60437 1756 aa13.66□□□□□ -0.22
SYVN1-213ENST00000531018 TBX22Q9Y458 520 aa13.65□□□□□ -0.22
SYVN1-213ENST00000531018 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
SYVN1-213ENST00000531018 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
SYVN1-213ENST00000531018 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
SYVN1-213ENST00000531018 SETBP1Q9Y6X0 1596 aa13.65□□□□□ -0.22
SYVN1-213ENST00000531018 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
SYVN1-213ENST00000531018 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
SYVN1-213ENST00000531018 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
SYVN1-213ENST00000531018 HSPA1LP34931 641 aa13.64□□□□□ -0.23
SYVN1-213ENST00000531018 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
SYVN1-213ENST00000531018 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
SYVN1-213ENST00000531018 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
SYVN1-213ENST00000531018 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
SYVN1-213ENST00000531018 PIK3R4Q99570 1358 aa13.61□□□□□ -0.23
SYVN1-213ENST00000531018 TOM1O60784 492 aa13.61□□□□□ -0.23
SYVN1-213ENST00000531018 KCNA6P17658 529 aa13.61□□□□□ -0.23
SYVN1-213ENST00000531018 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
SYVN1-213ENST00000531018 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
SYVN1-213ENST00000531018 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
SYVN1-213ENST00000531018 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
SYVN1-213ENST00000531018 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
SYVN1-213ENST00000531018 NKTRP30414 1462 aaKnown RBP13.6□□□□□ -0.23
SYVN1-213ENST00000531018 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
SYVN1-213ENST00000531018 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
SYVN1-213ENST00000531018 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
SYVN1-213ENST00000531018 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
SYVN1-213ENST00000531018 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
SYVN1-213ENST00000531018 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
SYVN1-213ENST00000531018 METP08581 1390 aa13.55□□□□□ -0.24
SYVN1-213ENST00000531018 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
SYVN1-213ENST00000531018 BCANQ96GW7 911 aa13.54□□□□□ -0.24
SYVN1-213ENST00000531018 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
SYVN1-213ENST00000531018 NCOA3Q9Y6Q9 1424 aa13.54□□□□□ -0.24
SYVN1-213ENST00000531018 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
SYVN1-213ENST00000531018 TMEM94Q12767 1356 aa13.53□□□□□ -0.24
SYVN1-213ENST00000531018 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
SYVN1-213ENST00000531018 MYOM2P54296 1465 aa13.53□□□□□ -0.24
SYVN1-213ENST00000531018 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
SYVN1-213ENST00000531018 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
SYVN1-213ENST00000531018 DHX57Q6P158 1386 aaKnown RBP13.5□□□□□ -0.25
SYVN1-213ENST00000531018 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
SYVN1-213ENST00000531018 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
SYVN1-213ENST00000531018 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
SYVN1-213ENST00000531018 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
SYVN1-213ENST00000531018 LAMC1P11047 1609 aa13.47□□□□□ -0.25
SYVN1-213ENST00000531018 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
SYVN1-213ENST00000531018 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
SYVN1-213ENST00000531018 TECPR2O15040 1411 aa13.47□□□□□ -0.25
SYVN1-213ENST00000531018 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
SYVN1-213ENST00000531018 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
SYVN1-213ENST00000531018 ROBO2Q9HCK4 1378 aa13.45□□□□□ -0.26
SYVN1-213ENST00000531018 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
SYVN1-213ENST00000531018 LRPPRCP42704 1394 aaKnown RBP13.44□□□□□ -0.26
SYVN1-213ENST00000531018 MSH6P52701 1360 aa13.44□□□□□ -0.26
SYVN1-213ENST00000531018 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
SYVN1-213ENST00000531018 DCCP43146 1447 aa13.43□□□□□ -0.26
SYVN1-213ENST00000531018 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
SYVN1-213ENST00000531018 NALCNQ8IZF0 1738 aa13.43□□□□□ -0.26
SYVN1-213ENST00000531018 C19orf44Q9H6X5 657 aa13.43□□□□□ -0.26
SYVN1-213ENST00000531018 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
SYVN1-213ENST00000531018 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
SYVN1-213ENST00000531018 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
SYVN1-213ENST00000531018 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
SYVN1-213ENST00000531018 SIRT1Q96EB6 747 aa13.41□□□□□ -0.26
SYVN1-213ENST00000531018 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
SYVN1-213ENST00000531018 TMEM132EQ6IEE7 984 aa13.4□□□□□ -0.26
SYVN1-213ENST00000531018 SIN3AQ96ST3 1273 aa13.4□□□□□ -0.26
SYVN1-213ENST00000531018 SLAIN2Q9P270 581 aa13.39□□□□□ -0.27
SYVN1-213ENST00000531018 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
SYVN1-213ENST00000531018 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
SYVN1-213ENST00000531018 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
SYVN1-213ENST00000531018 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
SYVN1-213ENST00000531018 L3MBTL2Q969R5 705 aa13.37□□□□□ -0.27
SYVN1-213ENST00000531018 MST1RQ04912 1400 aa13.36□□□□□ -0.27
SYVN1-213ENST00000531018 ATF3P18847 181 aa13.35□□□□□ -0.27
SYVN1-213ENST00000531018 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
SYVN1-213ENST00000531018 CDC42BPGQ6DT37 1551 aa13.35□□□□□ -0.27
SYVN1-213ENST00000531018 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms