RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
BRK1-201ENST00000530758 ANKLE2Q86XL3 938 aa23.43■■□□□ 1.34
BRK1-201ENST00000530758 RPGRIP1LQ68CZ1 1315 aa23.42■■□□□ 1.34
BRK1-201ENST00000530758 HDGFP51858 240 aaKnown RBP23.42■■□□□ 1.34
BRK1-201ENST00000530758 MED14O60244 1454 aa23.42■■□□□ 1.34
BRK1-201ENST00000530758 LTKP29376 864 aa23.41■■□□□ 1.34
BRK1-201ENST00000530758 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
BRK1-201ENST00000530758 RIMS2Q9UQ26 1411 aa23.4■■□□□ 1.34
BRK1-201ENST00000530758 TXNDC2Q86VQ3 553 aa23.39■■□□□ 1.33
BRK1-201ENST00000530758 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.33
BRK1-201ENST00000530758 EID1Q9Y6B2 187 aa23.39■■□□□ 1.33
BRK1-201ENST00000530758 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
BRK1-201ENST00000530758 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
BRK1-201ENST00000530758 PPLO60437 1756 aa23.37■■□□□ 1.33
BRK1-201ENST00000530758 IFT172Q9UG01 1749 aa23.37■■□□□ 1.33
BRK1-201ENST00000530758 ZNF326Q5BKZ1 582 aaKnown RBP23.36■■□□□ 1.33
BRK1-201ENST00000530758 NPHP4O75161 1426 aaPredicted RBP23.35■■□□□ 1.33
BRK1-201ENST00000530758 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
BRK1-201ENST00000530758 IQSEC2Q5JU85 1478 aa23.35■■□□□ 1.33
BRK1-201ENST00000530758 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
BRK1-201ENST00000530758 RGL3Q3MIN7 710 aa23.33■■□□□ 1.33
BRK1-201ENST00000530758 STAC3Q96MF2 364 aa23.33■■□□□ 1.33
BRK1-201ENST00000530758 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
BRK1-201ENST00000530758 VGFO15240 615 aaPredicted RBP23.31■■□□□ 1.32
BRK1-201ENST00000530758 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
BRK1-201ENST00000530758 MYOM2P54296 1465 aa23.26■■□□□ 1.31
BRK1-201ENST00000530758 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
BRK1-201ENST00000530758 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
BRK1-201ENST00000530758 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
BRK1-201ENST00000530758 NRXN1Q9ULB1 1477 aa23.25■■□□□ 1.31
BRK1-201ENST00000530758 NEUROD1Q13562 356 aa23.25■■□□□ 1.31
BRK1-201ENST00000530758 CCER1Q8TC90 406 aaPredicted RBP23.25■■□□□ 1.31
BRK1-201ENST00000530758 NRXN3Q9Y4C0 1643 aa23.24■■□□□ 1.31
BRK1-201ENST00000530758 ADAMTS13Q76LX8 1427 aa23.23■■□□□ 1.31
BRK1-201ENST00000530758 CPS1P31327 1500 aa23.23■■□□□ 1.31
BRK1-201ENST00000530758 DCAF11Q8TEB1 546 aa23.22■■□□□ 1.31
BRK1-201ENST00000530758 TBX22Q9Y458 520 aa23.22■■□□□ 1.31
BRK1-201ENST00000530758 ADGRF5Q8IZF2 1346 aa23.22■■□□□ 1.31
BRK1-201ENST00000530758 L3MBTL2Q969R5 705 aa23.21■■□□□ 1.31
BRK1-201ENST00000530758 DIP2AQ14689 1571 aa23.21■■□□□ 1.31
BRK1-201ENST00000530758 TIMELESSQ9UNS1 1208 aa23.2■■□□□ 1.3
BRK1-201ENST00000530758 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
BRK1-201ENST00000530758 SETD1AO15047 1707 aaKnown RBP23.17■■□□□ 1.3
BRK1-201ENST00000530758 SLC26A8Q96RN1 970 aa23.16■■□□□ 1.3
BRK1-201ENST00000530758 PIK3R4Q99570 1358 aa23.15■■□□□ 1.3
BRK1-201ENST00000530758 ALKQ9UM73 1620 aa23.15■■□□□ 1.3
BRK1-201ENST00000530758 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
BRK1-201ENST00000530758 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
BRK1-201ENST00000530758 BCANQ96GW7 911 aa23.14■■□□□ 1.29
BRK1-201ENST00000530758 C14orf93Q9H972 538 aaKnown RBP23.14■■□□□ 1.29
BRK1-201ENST00000530758 TONSLQ96HA7 1378 aa23.14■■□□□ 1.29
BRK1-201ENST00000530758 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
BRK1-201ENST00000530758 LAMC1P11047 1609 aa23.12■■□□□ 1.29
BRK1-201ENST00000530758 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
BRK1-201ENST00000530758 KIAA1210Q9ULL0 1709 aa23.11■■□□□ 1.29
BRK1-201ENST00000530758 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
BRK1-201ENST00000530758 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
BRK1-201ENST00000530758 KCNA6P17658 529 aa23.09■■□□□ 1.29
BRK1-201ENST00000530758 METP08581 1390 aa23.08■■□□□ 1.29
BRK1-201ENST00000530758 NWD1Q149M9 1564 aa23.08■■□□□ 1.29
BRK1-201ENST00000530758 CFAP70Q5T0N1 1121 aa23.07■■□□□ 1.28
BRK1-201ENST00000530758 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
BRK1-201ENST00000530758 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
BRK1-201ENST00000530758 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
BRK1-201ENST00000530758 ASXL1Q8IXJ9 1541 aa23.03■■□□□ 1.28
BRK1-201ENST00000530758 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
BRK1-201ENST00000530758 TRPM1Q7Z4N2 1603 aa23.01■■□□□ 1.27
BRK1-201ENST00000530758 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
BRK1-201ENST00000530758 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
BRK1-201ENST00000530758 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
BRK1-201ENST00000530758 LRPPRCP42704 1394 aaKnown RBP22.99■■□□□ 1.27
BRK1-201ENST00000530758 ABCC11Q96J66 1382 aa22.99■■□□□ 1.27
BRK1-201ENST00000530758 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
BRK1-201ENST00000530758 KNDC1Q76NI1 1749 aa22.98■■□□□ 1.27
BRK1-201ENST00000530758 TECPR2O15040 1411 aa22.98■■□□□ 1.27
BRK1-201ENST00000530758 SIRT1Q96EB6 747 aa22.97■■□□□ 1.27
BRK1-201ENST00000530758 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
BRK1-201ENST00000530758 TOM1O60784 492 aa22.96■■□□□ 1.27
BRK1-201ENST00000530758 PIP4K2BP78356 416 aa22.95■■□□□ 1.26
BRK1-201ENST00000530758 NBPF1Q3BBV0 1214 aa22.95■■□□□ 1.26
BRK1-201ENST00000530758 PTCH1Q13635 1447 aa22.94■■□□□ 1.26
BRK1-201ENST00000530758 NCOA3Q9Y6Q9 1424 aa22.94■■□□□ 1.26
BRK1-201ENST00000530758 GPRASP1Q5JY77 1395 aa22.93■■□□□ 1.26
BRK1-201ENST00000530758 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
BRK1-201ENST00000530758 TMEM94Q12767 1356 aa22.92■■□□□ 1.26
BRK1-201ENST00000530758 DLC1Q96QB1 1528 aa22.92■■□□□ 1.26
BRK1-201ENST00000530758 PROSER2Q86WR7 435 aaPredicted RBP22.91■■□□□ 1.26
BRK1-201ENST00000530758 HSPA1LP34931 641 aa22.9■■□□□ 1.26
BRK1-201ENST00000530758 RBM33Q96EV2 1170 aaKnown RBP22.9■■□□□ 1.26
BRK1-201ENST00000530758 FAM135BQ49AJ0 1406 aa22.9■■□□□ 1.26
BRK1-201ENST00000530758 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.26
BRK1-201ENST00000530758 SCAF1Q9H7N4 1312 aaKnown RBP22.89■■□□□ 1.26
BRK1-201ENST00000530758 STK26Q9P289 416 aa22.88■■□□□ 1.25
BRK1-201ENST00000530758 ROCK2O75116 1388 aaKnown RBP22.87■■□□□ 1.25
BRK1-201ENST00000530758 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
BRK1-201ENST00000530758 TRAK1Q9UPV9 953 aa22.84■■□□□ 1.25
BRK1-201ENST00000530758 WAPLQ7Z5K2 1190 aa22.81■■□□□ 1.24
BRK1-201ENST00000530758 CARD11Q9BXL7 1154 aa22.81■■□□□ 1.24
BRK1-201ENST00000530758 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.8■■□□□ 1.24
BRK1-201ENST00000530758 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms