RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
SF3B2-209ENST00000530322 IQSEC2Q5JU85 1478 aa25.11■■□□□ 1.61
SF3B2-209ENST00000530322 CPS1P31327 1500 aa25.1■■□□□ 1.61
SF3B2-209ENST00000530322 STRCP1A6NGW2 1772 aa25.1■■□□□ 1.61
SF3B2-209ENST00000530322 KIF1BO60333 1816 aa25.09■■□□□ 1.61
SF3B2-209ENST00000530322 HDGFP51858 240 aaKnown RBP25.09■■□□□ 1.61
SF3B2-209ENST00000530322 FOXD1Q16676 465 aa25.09■■□□□ 1.61
SF3B2-209ENST00000530322 PLEKHG1Q9ULL1 1385 aa25.07■■□□□ 1.6
SF3B2-209ENST00000530322 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.07■■□□□ 1.6
SF3B2-209ENST00000530322 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
SF3B2-209ENST00000530322 HRCP23327 699 aa25.04■■□□□ 1.6
SF3B2-209ENST00000530322 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
SF3B2-209ENST00000530322 SLC26A8Q96RN1 970 aa25.03■■□□□ 1.6
SF3B2-209ENST00000530322 ZNF326Q5BKZ1 582 aaKnown RBP25■■□□□ 1.59
SF3B2-209ENST00000530322 BCANQ96GW7 911 aa25■■□□□ 1.59
SF3B2-209ENST00000530322 NEXMIFQ5QGS0 1516 aa24.99■■□□□ 1.59
SF3B2-209ENST00000530322 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
SF3B2-209ENST00000530322 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
SF3B2-209ENST00000530322 CCDC144AA2RUR9 1427 aa24.97■■□□□ 1.59
SF3B2-209ENST00000530322 ADAMTS13Q76LX8 1427 aa24.96■■□□□ 1.59
SF3B2-209ENST00000530322 TBX22Q9Y458 520 aa24.95■■□□□ 1.58
SF3B2-209ENST00000530322 DIP2AQ14689 1571 aa24.95■■□□□ 1.58
SF3B2-209ENST00000530322 NWD1Q149M9 1564 aa24.94■■□□□ 1.58
SF3B2-209ENST00000530322 CHD2O14647 1828 aaKnown RBP24.94■■□□□ 1.58
SF3B2-209ENST00000530322 KCNA6P17658 529 aa24.94■■□□□ 1.58
SF3B2-209ENST00000530322 NRXN3Q9Y4C0 1643 aa24.94■■□□□ 1.58
SF3B2-209ENST00000530322 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
SF3B2-209ENST00000530322 XIRP1Q702N8 1843 aaKnown RBP24.92■■□□□ 1.58
SF3B2-209ENST00000530322 PPLO60437 1756 aa24.91■■□□□ 1.58
SF3B2-209ENST00000530322 RPGRIP1LQ68CZ1 1315 aa24.9■■□□□ 1.58
SF3B2-209ENST00000530322 SPATA31E1Q6ZUB1 1445 aa24.9■■□□□ 1.58
SF3B2-209ENST00000530322 NKTRP30414 1462 aaKnown RBP24.88■■□□□ 1.57
SF3B2-209ENST00000530322 UBAP1LF5GYI3 381 aa24.87■■□□□ 1.57
SF3B2-209ENST00000530322 PIK3R4Q99570 1358 aa24.86■■□□□ 1.57
SF3B2-209ENST00000530322 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
SF3B2-209ENST00000530322 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
SF3B2-209ENST00000530322 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
SF3B2-209ENST00000530322 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
SF3B2-209ENST00000530322 RGL3Q3MIN7 710 aa24.83■■□□□ 1.57
SF3B2-209ENST00000530322 TMEM94Q12767 1356 aa24.82■■□□□ 1.56
SF3B2-209ENST00000530322 PROSER2Q86WR7 435 aaPredicted RBP24.82■■□□□ 1.56
SF3B2-209ENST00000530322 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
SF3B2-209ENST00000530322 TOM1O60784 492 aa24.81■■□□□ 1.56
SF3B2-209ENST00000530322 SETD1AO15047 1707 aaKnown RBP24.8■■□□□ 1.56
SF3B2-209ENST00000530322 METP08581 1390 aa24.8■■□□□ 1.56
SF3B2-209ENST00000530322 XRN1Q8IZH2 1706 aaKnown RBP24.78■■□□□ 1.56
SF3B2-209ENST00000530322 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
SF3B2-209ENST00000530322 AMOTL2Q9Y2J4 779 aa24.77■■□□□ 1.56
SF3B2-209ENST00000530322 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
SF3B2-209ENST00000530322 ADGRF5Q8IZF2 1346 aa24.75■■□□□ 1.55
SF3B2-209ENST00000530322 PIP4K2BP78356 416 aa24.73■■□□□ 1.55
SF3B2-209ENST00000530322 NCOA3Q9Y6Q9 1424 aa24.72■■□□□ 1.55
SF3B2-209ENST00000530322 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
SF3B2-209ENST00000530322 PIK3C2GO75747 1445 aa24.69■■□□□ 1.54
SF3B2-209ENST00000530322 MYOM2P54296 1465 aa24.69■■□□□ 1.54
SF3B2-209ENST00000530322 MSH6P52701 1360 aa24.68■■□□□ 1.54
SF3B2-209ENST00000530322 NRXN1Q9ULB1 1477 aa24.68■■□□□ 1.54
SF3B2-209ENST00000530322 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.64■■□□□ 1.54
SF3B2-209ENST00000530322 PRAG1Q86YV5 1406 aa24.64■■□□□ 1.54
SF3B2-209ENST00000530322 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
SF3B2-209ENST00000530322 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
SF3B2-209ENST00000530322 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
SF3B2-209ENST00000530322 C19orf44Q9H6X5 657 aa24.61■■□□□ 1.53
SF3B2-209ENST00000530322 LAMC1P11047 1609 aa24.61■■□□□ 1.53
SF3B2-209ENST00000530322 DHX57Q6P158 1386 aaKnown RBP24.6■■□□□ 1.53
SF3B2-209ENST00000530322 ROBO2Q9HCK4 1378 aa24.59■■□□□ 1.53
SF3B2-209ENST00000530322 HSPA1LP34931 641 aa24.59■■□□□ 1.53
SF3B2-209ENST00000530322 FAM135BQ49AJ0 1406 aa24.59■■□□□ 1.53
SF3B2-209ENST00000530322 DCAF11Q8TEB1 546 aa24.58■■□□□ 1.53
SF3B2-209ENST00000530322 C14orf93Q9H972 538 aaKnown RBP24.58■■□□□ 1.53
SF3B2-209ENST00000530322 STAC3Q96MF2 364 aa24.57■■□□□ 1.52
SF3B2-209ENST00000530322 NALCNQ8IZF0 1738 aa24.57■■□□□ 1.52
SF3B2-209ENST00000530322 ROBO1Q9Y6N7 1651 aa24.56■■□□□ 1.52
SF3B2-209ENST00000530322 DCCP43146 1447 aa24.56■■□□□ 1.52
SF3B2-209ENST00000530322 SLAIN2Q9P270 581 aa24.56■■□□□ 1.52
SF3B2-209ENST00000530322 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
SF3B2-209ENST00000530322 KNDC1Q76NI1 1749 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 TECPR2O15040 1411 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 ADGRL3Q9HAR2 1447 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 CFAP70Q5T0N1 1121 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 TMEM132EQ6IEE7 984 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 CADPS2Q86UW7 1296 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 KDM2AQ9Y2K7 1162 aa24.55■■□□□ 1.52
SF3B2-209ENST00000530322 ATF3P18847 181 aa24.54■■□□□ 1.52
SF3B2-209ENST00000530322 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
SF3B2-209ENST00000530322 STK26Q9P289 416 aa24.52■■□□□ 1.52
SF3B2-209ENST00000530322 YTHDC2Q9H6S0 1430 aaKnown RBP24.52■■□□□ 1.52
SF3B2-209ENST00000530322 ADGRB1O14514 1584 aa24.48■■□□□ 1.51
SF3B2-209ENST00000530322 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
SF3B2-209ENST00000530322 MST1RQ04912 1400 aa24.46■■□□□ 1.51
SF3B2-209ENST00000530322 WAPLQ7Z5K2 1190 aa24.45■■□□□ 1.5
SF3B2-209ENST00000530322 SIRT1Q96EB6 747 aa24.44■■□□□ 1.5
SF3B2-209ENST00000530322 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
SF3B2-209ENST00000530322 PHLPP1O60346 1717 aa24.41■■□□□ 1.5
SF3B2-209ENST00000530322 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
SF3B2-209ENST00000530322 NEUROD1Q13562 356 aa24.41■■□□□ 1.5
SF3B2-209ENST00000530322 CDC42BPGQ6DT37 1551 aa24.41■■□□□ 1.5
SF3B2-209ENST00000530322 KIAA1210Q9ULL0 1709 aa24.41■■□□□ 1.5
SF3B2-209ENST00000530322 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
SF3B2-209ENST00000530322 L3MBTL2Q969R5 705 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms