RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 PPP1R15AO75807 674 aaPredicted RBP21.94■■□□□ 1.1
PACS1-207ENST00000528935 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.94■■□□□ 1.1
PACS1-207ENST00000528935 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
PACS1-207ENST00000528935 HFM1A2PYH4 1435 aa21.94■■□□□ 1.1
PACS1-207ENST00000528935 MYO5BQ9ULV0 1848 aa21.94■■□□□ 1.1
PACS1-207ENST00000528935 KCNA6P17658 529 aa21.93■■□□□ 1.1
PACS1-207ENST00000528935 PLEKHG1Q9ULL1 1385 aa21.93■■□□□ 1.1
PACS1-207ENST00000528935 ALKQ9UM73 1620 aa21.88■■□□□ 1.09
PACS1-207ENST00000528935 TRIM52Q96A61 297 aa21.88■■□□□ 1.09
PACS1-207ENST00000528935 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
PACS1-207ENST00000528935 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
PACS1-207ENST00000528935 HSPA1LP34931 641 aa21.87■■□□□ 1.09
PACS1-207ENST00000528935 NUTM2DQ5VT03 806 aaPredicted RBP21.86■■□□□ 1.09
PACS1-207ENST00000528935 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
PACS1-207ENST00000528935 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
PACS1-207ENST00000528935 TMEM94Q12767 1356 aa21.85■■□□□ 1.09
PACS1-207ENST00000528935 DISP3Q9P2K9 1392 aa21.84■■□□□ 1.09
PACS1-207ENST00000528935 XIRP1Q702N8 1843 aaKnown RBP21.83■■□□□ 1.08
PACS1-207ENST00000528935 NWD1Q149M9 1564 aa21.82■■□□□ 1.08
PACS1-207ENST00000528935 SLC4A1APQ9BWU0 796 aaKnown RBP21.82■■□□□ 1.08
PACS1-207ENST00000528935 NKTRP30414 1462 aaKnown RBP21.82■■□□□ 1.08
PACS1-207ENST00000528935 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
PACS1-207ENST00000528935 TRPM2O94759 1503 aa21.8■■□□□ 1.08
PACS1-207ENST00000528935 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
PACS1-207ENST00000528935 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
PACS1-207ENST00000528935 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
PACS1-207ENST00000528935 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
PACS1-207ENST00000528935 CLTCL1P53675 1640 aa21.77■■□□□ 1.08
PACS1-207ENST00000528935 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
PACS1-207ENST00000528935 MSH6P52701 1360 aa21.73■■□□□ 1.07
PACS1-207ENST00000528935 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
PACS1-207ENST00000528935 KIF1BO60333 1816 aa21.71■■□□□ 1.07
PACS1-207ENST00000528935 NCOA3Q9Y6Q9 1424 aa21.71■■□□□ 1.07
PACS1-207ENST00000528935 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
PACS1-207ENST00000528935 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
PACS1-207ENST00000528935 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
PACS1-207ENST00000528935 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.06
PACS1-207ENST00000528935 FOXD1Q16676 465 aa21.69■■□□□ 1.06
PACS1-207ENST00000528935 MPHOSPH9Q99550 1183 aa21.69■■□□□ 1.06
PACS1-207ENST00000528935 PTPRUQ92729 1446 aa21.68■■□□□ 1.06
PACS1-207ENST00000528935 NRXN3Q9Y4C0 1643 aa21.68■■□□□ 1.06
PACS1-207ENST00000528935 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
PACS1-207ENST00000528935 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
PACS1-207ENST00000528935 VGFO15240 615 aaPredicted RBP21.66■■□□□ 1.06
PACS1-207ENST00000528935 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
PACS1-207ENST00000528935 C14orf37Q86TY3 774 aa21.66■■□□□ 1.06
PACS1-207ENST00000528935 SLAIN2Q9P270 581 aa21.66■■□□□ 1.06
PACS1-207ENST00000528935 METP08581 1390 aa21.64■■□□□ 1.06
PACS1-207ENST00000528935 C19orf44Q9H6X5 657 aa21.64■■□□□ 1.05
PACS1-207ENST00000528935 CCDC144AA2RUR9 1427 aa21.62■■□□□ 1.05
PACS1-207ENST00000528935 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
PACS1-207ENST00000528935 ROBO1Q9Y6N7 1651 aa21.61■■□□□ 1.05
PACS1-207ENST00000528935 ATF3P18847 181 aa21.6■■□□□ 1.05
PACS1-207ENST00000528935 CADPS2Q86UW7 1296 aa21.6■■□□□ 1.05
PACS1-207ENST00000528935 XRN1Q8IZH2 1706 aaKnown RBP21.6■■□□□ 1.05
PACS1-207ENST00000528935 RAB3GAP2Q9H2M9 1393 aa21.57■■□□□ 1.04
PACS1-207ENST00000528935 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.57■■□□□ 1.04
PACS1-207ENST00000528935 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
PACS1-207ENST00000528935 RGL3Q3MIN7 710 aa21.55■■□□□ 1.04
PACS1-207ENST00000528935 PPLO60437 1756 aa21.55■■□□□ 1.04
PACS1-207ENST00000528935 DCCP43146 1447 aa21.53■■□□□ 1.04
PACS1-207ENST00000528935 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
PACS1-207ENST00000528935 ANKRD30BQ9BXX2 1392 aa21.51■■□□□ 1.03
PACS1-207ENST00000528935 SETD1AO15047 1707 aaKnown RBP21.5■■□□□ 1.03
PACS1-207ENST00000528935 SOCS7O14512 581 aa21.5■■□□□ 1.03
PACS1-207ENST00000528935 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
PACS1-207ENST00000528935 HRCP23327 699 aa21.49■■□□□ 1.03
PACS1-207ENST00000528935 PTCH1Q13635 1447 aa21.48■■□□□ 1.03
PACS1-207ENST00000528935 ADGRL3Q9HAR2 1447 aa21.48■■□□□ 1.03
PACS1-207ENST00000528935 PHLPP1O60346 1717 aa21.48■■□□□ 1.03
PACS1-207ENST00000528935 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
PACS1-207ENST00000528935 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
PACS1-207ENST00000528935 BRINP3Q76B58 766 aa21.46■■□□□ 1.03
PACS1-207ENST00000528935 JCADQ9P266 1359 aa21.45■■□□□ 1.02
PACS1-207ENST00000528935 MST1RQ04912 1400 aa21.45■■□□□ 1.02
PACS1-207ENST00000528935 IFT172Q9UG01 1749 aa21.43■■□□□ 1.02
PACS1-207ENST00000528935 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
PACS1-207ENST00000528935 COL16A1Q07092 1604 aaPredicted RBP21.43■■□□□ 1.02
PACS1-207ENST00000528935 AHDC1Q5TGY3 1603 aaPredicted RBP21.43■■□□□ 1.02
PACS1-207ENST00000528935 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
PACS1-207ENST00000528935 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
PACS1-207ENST00000528935 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.02
PACS1-207ENST00000528935 RGS17Q9UGC6 210 aaPredicted RBP21.39■■□□□ 1.01
PACS1-207ENST00000528935 LRPPRCP42704 1394 aaKnown RBP21.37■■□□□ 1.01
PACS1-207ENST00000528935 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
PACS1-207ENST00000528935 STK26Q9P289 416 aa21.37■■□□□ 1.01
PACS1-207ENST00000528935 ABCC11Q96J66 1382 aa21.36■■□□□ 1.01
PACS1-207ENST00000528935 C14orf93Q9H972 538 aaKnown RBP21.36■■□□□ 1.01
PACS1-207ENST00000528935 TECPR2O15040 1411 aa21.36■■□□□ 1.01
PACS1-207ENST00000528935 SPATA31A6Q5VVP1 1343 aa21.35■■□□□ 1.01
PACS1-207ENST00000528935 MYOM2P54296 1465 aa21.35■■□□□ 1.01
PACS1-207ENST00000528935 C1orf167Q5SNV9 1468 aa21.35■■□□□ 1.01
PACS1-207ENST00000528935 NRXN1Q9ULB1 1477 aa21.35■■□□□ 1.01
PACS1-207ENST00000528935 WAPLQ7Z5K2 1190 aa21.33■■□□□ 1.01
PACS1-207ENST00000528935 YTHDC2Q9H6S0 1430 aaKnown RBP21.32■■□□□ 1
PACS1-207ENST00000528935 CFAP70Q5T0N1 1121 aa21.32■■□□□ 1
PACS1-207ENST00000528935 NHSL1Q5SYE7 1610 aa21.32■■□□□ 1
PACS1-207ENST00000528935 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
PACS1-207ENST00000528935 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
PACS1-207ENST00000528935 SIRT1Q96EB6 747 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms