RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 IFFO2Q5TF58 517 aa15.01□□□□□ -0.01
COMMD9-205ENST00000528608 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
COMMD9-205ENST00000528608 FCHSD2O94868 740 aa15□□□□□ -0.01
COMMD9-205ENST00000528608 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
COMMD9-205ENST00000528608 NESP48681 1621 aa14.98□□□□□ -0.01
COMMD9-205ENST00000528608 ITGBL1O95965 494 aaPredicted RBP14.97□□□□□ -0.01
COMMD9-205ENST00000528608 RBM26Q5T8P6 1007 aaKnown RBP14.96□□□□□ -0.01
COMMD9-205ENST00000528608 SWT1Q5T5J6 900 aaKnown RBP14.95□□□□□ -0.02
COMMD9-205ENST00000528608 EYA1Q99502 592 aa14.95□□□□□ -0.02
COMMD9-205ENST00000528608 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
COMMD9-205ENST00000528608 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
COMMD9-205ENST00000528608 A0A0G2JS52 829 aa14.92□□□□□ -0.02
COMMD9-205ENST00000528608 KCNC4Q03721 635 aa14.91□□□□□ -0.02
COMMD9-205ENST00000528608 SLF2Q8IX21 1173 aa14.91□□□□□ -0.02
COMMD9-205ENST00000528608 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
COMMD9-205ENST00000528608 NECTIN2Q92692 538 aa14.9□□□□□ -0.02
COMMD9-205ENST00000528608 DNAJB2P25686 324 aa14.89□□□□□ -0.03
COMMD9-205ENST00000528608 HIC1Q14526 733 aa14.89□□□□□ -0.03
COMMD9-205ENST00000528608 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
COMMD9-205ENST00000528608 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
COMMD9-205ENST00000528608 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
COMMD9-205ENST00000528608 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
COMMD9-205ENST00000528608 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
COMMD9-205ENST00000528608 APLP1P51693 650 aa14.83□□□□□ -0.04
COMMD9-205ENST00000528608 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
COMMD9-205ENST00000528608 RCCD1A6NED2 376 aa14.82□□□□□ -0.04
COMMD9-205ENST00000528608 GNPATO15228 680 aa14.82□□□□□ -0.04
COMMD9-205ENST00000528608 TMEM134Q9H6X4 195 aa14.82□□□□□ -0.04
COMMD9-205ENST00000528608 GPIHBP1Q8IV16 184 aa14.81□□□□□ -0.04
COMMD9-205ENST00000528608 MTRQ99707 1265 aa14.81□□□□□ -0.04
COMMD9-205ENST00000528608 TULP1O00294 542 aaPredicted RBP14.8□□□□□ -0.04
COMMD9-205ENST00000528608 OATP04181 439 aa14.8□□□□□ -0.04
COMMD9-205ENST00000528608 GPR37O15354 613 aa14.79□□□□□ -0.04
COMMD9-205ENST00000528608 RGS20O76081 388 aa14.79□□□□□ -0.04
COMMD9-205ENST00000528608 CFTRP13569 1480 aa14.79□□□□□ -0.04
COMMD9-205ENST00000528608 TJAP1Q5JTD0 557 aa14.79□□□□□ -0.04
COMMD9-205ENST00000528608 IL21Q9HBE4 155 aa14.79□□□□□ -0.04
COMMD9-205ENST00000528608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.78□□□□□ -0.04
COMMD9-205ENST00000528608 PXYLP1Q8TE99 480 aa14.77□□□□□ -0.05
COMMD9-205ENST00000528608 PRR14Q9BWN1 585 aa14.77□□□□□ -0.05
COMMD9-205ENST00000528608 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.05
COMMD9-205ENST00000528608 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
COMMD9-205ENST00000528608 FECHP22830 423 aa14.76□□□□□ -0.05
COMMD9-205ENST00000528608 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
COMMD9-205ENST00000528608 COPS2P61201 443 aa14.72□□□□□ -0.05
COMMD9-205ENST00000528608 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
COMMD9-205ENST00000528608 ZNF516Q92618 1163 aa14.7□□□□□ -0.06
COMMD9-205ENST00000528608 PCDHB3Q9Y5E6 796 aa14.7□□□□□ -0.06
COMMD9-205ENST00000528608 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
COMMD9-205ENST00000528608 KMT5BQ4FZB7 885 aa14.69□□□□□ -0.06
COMMD9-205ENST00000528608 CFHP08603 1231 aa14.68□□□□□ -0.06
COMMD9-205ENST00000528608 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
COMMD9-205ENST00000528608 CUX2O14529 1486 aa14.64□□□□□ -0.07
COMMD9-205ENST00000528608 PRDM2Q13029 1718 aa14.64□□□□□ -0.07
COMMD9-205ENST00000528608 SLC10A3P09131 477 aa14.63□□□□□ -0.07
COMMD9-205ENST00000528608 RSPH4AQ5TD94 716 aa14.63□□□□□ -0.07
COMMD9-205ENST00000528608 BLOC1S3Q6QNY0 202 aa14.63□□□□□ -0.07
COMMD9-205ENST00000528608 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
COMMD9-205ENST00000528608 ACTN4O43707 911 aaKnown RBP14.62□□□□□ -0.07
COMMD9-205ENST00000528608 ZPR1O75312 459 aa14.61□□□□□ -0.07
COMMD9-205ENST00000528608 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
COMMD9-205ENST00000528608 NLRP7Q8WX94 980 aa14.61□□□□□ -0.07
COMMD9-205ENST00000528608 DAXXQ9UER7 740 aaPredicted RBP14.6□□□□□ -0.07
COMMD9-205ENST00000528608 PPP1R18Q6NYC8 613 aa14.59□□□□□ -0.07
COMMD9-205ENST00000528608 WDR62O43379 1518 aa14.58□□□□□ -0.08
COMMD9-205ENST00000528608 RDH13Q8NBN7 331 aa14.58□□□□□ -0.08
COMMD9-205ENST00000528608 IRX2Q9BZI1 471 aaPredicted RBP14.58□□□□□ -0.08
COMMD9-205ENST00000528608 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
COMMD9-205ENST00000528608 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
COMMD9-205ENST00000528608 DDX11L8A8MPP1 907 aa14.56□□□□□ -0.08
COMMD9-205ENST00000528608 GGCXP38435 758 aa14.56□□□□□ -0.08
COMMD9-205ENST00000528608 PHOX2BQ99453 314 aa14.56□□□□□ -0.08
COMMD9-205ENST00000528608 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
COMMD9-205ENST00000528608 TLL1O43897 1013 aa14.53□□□□□ -0.08
COMMD9-205ENST00000528608 NR1I2O75469 434 aa14.52□□□□□ -0.09
COMMD9-205ENST00000528608 SULF1Q8IWU6 871 aa14.52□□□□□ -0.09
COMMD9-205ENST00000528608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.51□□□□□ -0.09
COMMD9-205ENST00000528608 PRKD2Q9BZL6 878 aa14.5□□□□□ -0.09
COMMD9-205ENST00000528608 IRF6O14896 467 aa14.49□□□□□ -0.09
COMMD9-205ENST00000528608 LMOD2Q6P5Q4 547 aa14.49□□□□□ -0.09
COMMD9-205ENST00000528608 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
COMMD9-205ENST00000528608 PUS10Q3MIT2 529 aaKnown RBP14.48□□□□□ -0.09
COMMD9-205ENST00000528608 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
COMMD9-205ENST00000528608 TMUB1Q9BVT8 246 aa14.46□□□□□ -0.09
COMMD9-205ENST00000528608 CCDC102AQ96A19 550 aa14.45□□□□□ -0.1
COMMD9-205ENST00000528608 ADH1BP00325 375 aa14.44□□□□□ -0.1
COMMD9-205ENST00000528608 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
COMMD9-205ENST00000528608 FUT2Q10981 343 aa14.43□□□□□ -0.1
COMMD9-205ENST00000528608 GCGRP47871 477 aa14.42□□□□□ -0.1
COMMD9-205ENST00000528608 SCUBE3Q8IX30 993 aa14.42□□□□□ -0.1
COMMD9-205ENST00000528608 V9GY48 417 aaPredicted RBP14.42□□□□□ -0.1
COMMD9-205ENST00000528608 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
COMMD9-205ENST00000528608 S1PR4O95977 384 aa14.41□□□□□ -0.1
COMMD9-205ENST00000528608 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
COMMD9-205ENST00000528608 RNF223E7ERA6 249 aa14.4□□□□□ -0.1
COMMD9-205ENST00000528608 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
COMMD9-205ENST00000528608 CUX1P39880 1505 aa14.4□□□□□ -0.1
COMMD9-205ENST00000528608 MORN1Q5T089 497 aa14.39□□□□□ -0.11
COMMD9-205ENST00000528608 SLC6A16Q9GZN6 736 aa14.37□□□□□ -0.11
COMMD9-205ENST00000528608 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms