RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 NAIPQ13075 1403 aa21.03■□□□□ 0.96
CHRDL2-205ENST00000528471 RIMS2Q9UQ26 1411 aa21.03■□□□□ 0.96
CHRDL2-205ENST00000528471 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
CHRDL2-205ENST00000528471 HDGFP51858 240 aaKnown RBP21.01■□□□□ 0.95
CHRDL2-205ENST00000528471 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
CHRDL2-205ENST00000528471 ALKQ9UM73 1620 aa21■□□□□ 0.95
CHRDL2-205ENST00000528471 HFM1A2PYH4 1435 aa20.99■□□□□ 0.95
CHRDL2-205ENST00000528471 PLEKHG1Q9ULL1 1385 aa20.99■□□□□ 0.95
CHRDL2-205ENST00000528471 NWD1Q149M9 1564 aa20.99■□□□□ 0.95
CHRDL2-205ENST00000528471 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
CHRDL2-205ENST00000528471 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
CHRDL2-205ENST00000528471 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
CHRDL2-205ENST00000528471 KIF1BO60333 1816 aa20.96■□□□□ 0.95
CHRDL2-205ENST00000528471 NKTRP30414 1462 aaKnown RBP20.96■□□□□ 0.95
CHRDL2-205ENST00000528471 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.96■□□□□ 0.95
CHRDL2-205ENST00000528471 KCNA6P17658 529 aa20.95■□□□□ 0.94
CHRDL2-205ENST00000528471 TRPM2O94759 1503 aa20.94■□□□□ 0.94
CHRDL2-205ENST00000528471 DIP2AQ14689 1571 aa20.94■□□□□ 0.94
CHRDL2-205ENST00000528471 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
CHRDL2-205ENST00000528471 HSPA1LP34931 641 aa20.93■□□□□ 0.94
CHRDL2-205ENST00000528471 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
CHRDL2-205ENST00000528471 TMEM94Q12767 1356 aa20.92■□□□□ 0.94
CHRDL2-205ENST00000528471 NUTM2DQ5VT03 806 aaPredicted RBP20.91■□□□□ 0.94
CHRDL2-205ENST00000528471 PROSER2Q86WR7 435 aaPredicted RBP20.9■□□□□ 0.94
CHRDL2-205ENST00000528471 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
CHRDL2-205ENST00000528471 TBX22Q9Y458 520 aa20.86■□□□□ 0.93
CHRDL2-205ENST00000528471 ADAMTS13Q76LX8 1427 aa20.86■□□□□ 0.93
CHRDL2-205ENST00000528471 RBM33Q96EV2 1170 aaKnown RBP20.84■□□□□ 0.93
CHRDL2-205ENST00000528471 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
CHRDL2-205ENST00000528471 NRXN3Q9Y4C0 1643 aa20.84■□□□□ 0.93
CHRDL2-205ENST00000528471 SETBP1Q9Y6X0 1596 aa20.84■□□□□ 0.93
CHRDL2-205ENST00000528471 MSH6P52701 1360 aa20.83■□□□□ 0.93
CHRDL2-205ENST00000528471 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.93
CHRDL2-205ENST00000528471 NEXMIFQ5QGS0 1516 aa20.83■□□□□ 0.92
CHRDL2-205ENST00000528471 PIK3R4Q99570 1358 aa20.83■□□□□ 0.92
CHRDL2-205ENST00000528471 ROBO1Q9Y6N7 1651 aa20.82■□□□□ 0.92
CHRDL2-205ENST00000528471 C14orf37Q86TY3 774 aa20.78■□□□□ 0.92
CHRDL2-205ENST00000528471 XRN1Q8IZH2 1706 aaKnown RBP20.78■□□□□ 0.92
CHRDL2-205ENST00000528471 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.91
CHRDL2-205ENST00000528471 PPLO60437 1756 aa20.76■□□□□ 0.91
CHRDL2-205ENST00000528471 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
CHRDL2-205ENST00000528471 NCOA3Q9Y6Q9 1424 aa20.75■□□□□ 0.91
CHRDL2-205ENST00000528471 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
CHRDL2-205ENST00000528471 ILDR2Q71H61 639 aa20.73■□□□□ 0.91
CHRDL2-205ENST00000528471 AMOTL2Q9Y2J4 779 aa20.73■□□□□ 0.91
CHRDL2-205ENST00000528471 PHLPP1O60346 1717 aa20.72■□□□□ 0.91
CHRDL2-205ENST00000528471 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
CHRDL2-205ENST00000528471 FOXD1Q16676 465 aa20.71■□□□□ 0.91
CHRDL2-205ENST00000528471 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.9
CHRDL2-205ENST00000528471 SETD5Q9C0A6 1442 aa20.7■□□□□ 0.9
CHRDL2-205ENST00000528471 METP08581 1390 aa20.69■□□□□ 0.9
CHRDL2-205ENST00000528471 MPHOSPH9Q99550 1183 aa20.69■□□□□ 0.9
CHRDL2-205ENST00000528471 SLAIN2Q9P270 581 aa20.69■□□□□ 0.9
CHRDL2-205ENST00000528471 ACIN1Q9UKV3 1341 aaKnown RBP20.69■□□□□ 0.9
CHRDL2-205ENST00000528471 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
CHRDL2-205ENST00000528471 RPGRIP1LQ68CZ1 1315 aa20.68■□□□□ 0.9
CHRDL2-205ENST00000528471 IFT172Q9UG01 1749 aa20.68■□□□□ 0.9
CHRDL2-205ENST00000528471 ATF3P18847 181 aa20.67■□□□□ 0.9
CHRDL2-205ENST00000528471 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
CHRDL2-205ENST00000528471 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
CHRDL2-205ENST00000528471 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
CHRDL2-205ENST00000528471 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
CHRDL2-205ENST00000528471 DCCP43146 1447 aa20.64■□□□□ 0.89
CHRDL2-205ENST00000528471 RAB3GAP2Q9H2M9 1393 aa20.62■□□□□ 0.89
CHRDL2-205ENST00000528471 COL16A1Q07092 1604 aaPredicted RBP20.61■□□□□ 0.89
CHRDL2-205ENST00000528471 SPATA31E1Q6ZUB1 1445 aa20.6■□□□□ 0.89
CHRDL2-205ENST00000528471 PTCH1Q13635 1447 aa20.59■□□□□ 0.89
CHRDL2-205ENST00000528471 ADGRL3Q9HAR2 1447 aa20.59■□□□□ 0.89
CHRDL2-205ENST00000528471 SOCS7O14512 581 aa20.59■□□□□ 0.89
CHRDL2-205ENST00000528471 RGL3Q3MIN7 710 aa20.59■□□□□ 0.89
CHRDL2-205ENST00000528471 AHDC1Q5TGY3 1603 aaPredicted RBP20.59■□□□□ 0.89
CHRDL2-205ENST00000528471 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
CHRDL2-205ENST00000528471 JCADQ9P266 1359 aa20.55■□□□□ 0.88
CHRDL2-205ENST00000528471 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
CHRDL2-205ENST00000528471 MST1RQ04912 1400 aa20.54■□□□□ 0.88
CHRDL2-205ENST00000528471 PRAG1Q86YV5 1406 aa20.54■□□□□ 0.88
CHRDL2-205ENST00000528471 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
CHRDL2-205ENST00000528471 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
CHRDL2-205ENST00000528471 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
CHRDL2-205ENST00000528471 SHPRHQ149N8 1683 aa20.53■□□□□ 0.88
CHRDL2-205ENST00000528471 KNDC1Q76NI1 1749 aa20.52■□□□□ 0.88
CHRDL2-205ENST00000528471 BRINP3Q76B58 766 aa20.52■□□□□ 0.87
CHRDL2-205ENST00000528471 LAMC1P11047 1609 aa20.51■□□□□ 0.87
CHRDL2-205ENST00000528471 PIK3C2GO75747 1445 aa20.5■□□□□ 0.87
CHRDL2-205ENST00000528471 MYOM2P54296 1465 aa20.47■□□□□ 0.87
CHRDL2-205ENST00000528471 CDC42BPGQ6DT37 1551 aa20.46■□□□□ 0.87
CHRDL2-205ENST00000528471 STK26Q9P289 416 aa20.45■□□□□ 0.86
CHRDL2-205ENST00000528471 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
CHRDL2-205ENST00000528471 SPATA31A6Q5VVP1 1343 aa20.45■□□□□ 0.86
CHRDL2-205ENST00000528471 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
CHRDL2-205ENST00000528471 TECPR2O15040 1411 aa20.44■□□□□ 0.86
CHRDL2-205ENST00000528471 NRXN1Q9ULB1 1477 aa20.43■□□□□ 0.86
CHRDL2-205ENST00000528471 HRCP23327 699 aa20.42■□□□□ 0.86
CHRDL2-205ENST00000528471 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
CHRDL2-205ENST00000528471 LRP6O75581 1613 aa20.42■□□□□ 0.86
CHRDL2-205ENST00000528471 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
CHRDL2-205ENST00000528471 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
CHRDL2-205ENST00000528471 MEX3CQ5U5Q3 659 aaKnown RBP20.4■□□□□ 0.86
CHRDL2-205ENST00000528471 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
CHRDL2-205ENST00000528471 FMN2Q9NZ56 1722 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms