RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 HSPA1LP34931 641 aa18.04■□□□□ 0.48
RAE1-209ENST00000527947 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
RAE1-209ENST00000527947 KCNA6P17658 529 aa18.03■□□□□ 0.48
RAE1-209ENST00000527947 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
RAE1-209ENST00000527947 PLEKHG1Q9ULL1 1385 aa18.03■□□□□ 0.48
RAE1-209ENST00000527947 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
RAE1-209ENST00000527947 NWD1Q149M9 1564 aa18.02■□□□□ 0.47
RAE1-209ENST00000527947 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
RAE1-209ENST00000527947 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
RAE1-209ENST00000527947 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
RAE1-209ENST00000527947 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
RAE1-209ENST00000527947 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
RAE1-209ENST00000527947 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
RAE1-209ENST00000527947 BCANQ96GW7 911 aa17.99■□□□□ 0.47
RAE1-209ENST00000527947 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
RAE1-209ENST00000527947 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
RAE1-209ENST00000527947 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
RAE1-209ENST00000527947 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
RAE1-209ENST00000527947 ILDR2Q71H61 639 aa17.95■□□□□ 0.46
RAE1-209ENST00000527947 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
RAE1-209ENST00000527947 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
RAE1-209ENST00000527947 TBX22Q9Y458 520 aa17.95■□□□□ 0.46
RAE1-209ENST00000527947 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
RAE1-209ENST00000527947 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
RAE1-209ENST00000527947 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
RAE1-209ENST00000527947 TRPM2O94759 1503 aa17.92■□□□□ 0.46
RAE1-209ENST00000527947 MED1Q15648 1581 aaPredicted RBP17.92■□□□□ 0.46
RAE1-209ENST00000527947 HRCP23327 699 aa17.91■□□□□ 0.46
RAE1-209ENST00000527947 FAM135BQ49AJ0 1406 aa17.91■□□□□ 0.46
RAE1-209ENST00000527947 NUTM2DQ5VT03 806 aaPredicted RBP17.91■□□□□ 0.46
RAE1-209ENST00000527947 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
RAE1-209ENST00000527947 RBM33Q96EV2 1170 aaKnown RBP17.9■□□□□ 0.46
RAE1-209ENST00000527947 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
RAE1-209ENST00000527947 CHD2O14647 1828 aaKnown RBP17.9■□□□□ 0.46
RAE1-209ENST00000527947 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
RAE1-209ENST00000527947 MSH6P52701 1360 aa17.89■□□□□ 0.45
RAE1-209ENST00000527947 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
RAE1-209ENST00000527947 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
RAE1-209ENST00000527947 SETBP1Q9Y6X0 1596 aa17.87■□□□□ 0.45
RAE1-209ENST00000527947 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
RAE1-209ENST00000527947 NRXN3Q9Y4C0 1643 aa17.84■□□□□ 0.45
RAE1-209ENST00000527947 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
RAE1-209ENST00000527947 SOCS7O14512 581 aa17.83■□□□□ 0.45
RAE1-209ENST00000527947 PTPRUQ92729 1446 aa17.83■□□□□ 0.44
RAE1-209ENST00000527947 ROBO1Q9Y6N7 1651 aa17.83■□□□□ 0.44
RAE1-209ENST00000527947 FOXD1Q16676 465 aa17.81■□□□□ 0.44
RAE1-209ENST00000527947 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
RAE1-209ENST00000527947 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
RAE1-209ENST00000527947 XRN1Q8IZH2 1706 aaKnown RBP17.8■□□□□ 0.44
RAE1-209ENST00000527947 KIF1BO60333 1816 aa17.79■□□□□ 0.44
RAE1-209ENST00000527947 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
RAE1-209ENST00000527947 METP08581 1390 aa17.78■□□□□ 0.44
RAE1-209ENST00000527947 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
RAE1-209ENST00000527947 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
RAE1-209ENST00000527947 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.43
RAE1-209ENST00000527947 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
RAE1-209ENST00000527947 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
RAE1-209ENST00000527947 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
RAE1-209ENST00000527947 DCCP43146 1447 aa17.74■□□□□ 0.43
RAE1-209ENST00000527947 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
RAE1-209ENST00000527947 ATF3P18847 181 aa17.74■□□□□ 0.43
RAE1-209ENST00000527947 PHLPP1O60346 1717 aa17.7■□□□□ 0.42
RAE1-209ENST00000527947 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
RAE1-209ENST00000527947 SPATA31E1Q6ZUB1 1445 aa17.7■□□□□ 0.42
RAE1-209ENST00000527947 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
RAE1-209ENST00000527947 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
RAE1-209ENST00000527947 JCADQ9P266 1359 aa17.69■□□□□ 0.42
RAE1-209ENST00000527947 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
RAE1-209ENST00000527947 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
RAE1-209ENST00000527947 PTCH1Q13635 1447 aa17.68■□□□□ 0.42
RAE1-209ENST00000527947 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
RAE1-209ENST00000527947 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
RAE1-209ENST00000527947 PPLO60437 1756 aa17.68■□□□□ 0.42
RAE1-209ENST00000527947 MST1RQ04912 1400 aa17.67■□□□□ 0.42
RAE1-209ENST00000527947 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
RAE1-209ENST00000527947 BRINP3Q76B58 766 aa17.66■□□□□ 0.42
RAE1-209ENST00000527947 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
RAE1-209ENST00000527947 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
RAE1-209ENST00000527947 NALCNQ8IZF0 1738 aa17.64■□□□□ 0.41
RAE1-209ENST00000527947 ROBO2Q9HCK4 1378 aa17.63■□□□□ 0.41
RAE1-209ENST00000527947 SPATA31A6Q5VVP1 1343 aa17.61■□□□□ 0.41
RAE1-209ENST00000527947 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
RAE1-209ENST00000527947 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
RAE1-209ENST00000527947 SHPRHQ149N8 1683 aa17.58■□□□□ 0.41
RAE1-209ENST00000527947 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.4
RAE1-209ENST00000527947 STAC3Q96MF2 364 aa17.57■□□□□ 0.4
RAE1-209ENST00000527947 LRP6O75581 1613 aa17.57■□□□□ 0.4
RAE1-209ENST00000527947 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
RAE1-209ENST00000527947 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
RAE1-209ENST00000527947 TECPR2O15040 1411 aa17.56■□□□□ 0.4
RAE1-209ENST00000527947 POTEAQ6S8J7 498 aa17.56■□□□□ 0.4
RAE1-209ENST00000527947 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
RAE1-209ENST00000527947 MYOM2P54296 1465 aa17.55■□□□□ 0.4
RAE1-209ENST00000527947 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
RAE1-209ENST00000527947 CDC42BPGQ6DT37 1551 aa17.53■□□□□ 0.4
RAE1-209ENST00000527947 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
RAE1-209ENST00000527947 LAMC1P11047 1609 aa17.52■□□□□ 0.4
RAE1-209ENST00000527947 LRRC59Q96AG4 307 aaKnown RBP17.52■□□□□ 0.39
RAE1-209ENST00000527947 MEX3CQ5U5Q3 659 aaKnown RBP17.51■□□□□ 0.39
RAE1-209ENST00000527947 C14orf93Q9H972 538 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms