RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 TRPM2O94759 1503 aa13.82□□□□□ -0.2
LINC00958-203ENST00000527945 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
LINC00958-203ENST00000527945 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
LINC00958-203ENST00000527945 TXNDC2Q86VQ3 553 aa13.81□□□□□ -0.2
LINC00958-203ENST00000527945 IQGAP1P46940 1657 aa13.8□□□□□ -0.2
LINC00958-203ENST00000527945 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
LINC00958-203ENST00000527945 TOM1O60784 492 aa13.78□□□□□ -0.2
LINC00958-203ENST00000527945 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
LINC00958-203ENST00000527945 ZFYVE9O95405 1425 aa13.77□□□□□ -0.21
LINC00958-203ENST00000527945 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC00958-203ENST00000527945 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
LINC00958-203ENST00000527945 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
LINC00958-203ENST00000527945 KIF1BO60333 1816 aa13.75□□□□□ -0.21
LINC00958-203ENST00000527945 STRCP1A6NGW2 1772 aa13.74□□□□□ -0.21
LINC00958-203ENST00000527945 KCNA6P17658 529 aa13.73□□□□□ -0.21
LINC00958-203ENST00000527945 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
LINC00958-203ENST00000527945 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
LINC00958-203ENST00000527945 PLEKHG1Q9ULL1 1385 aa13.72□□□□□ -0.21
LINC00958-203ENST00000527945 HRCP23327 699 aa13.72□□□□□ -0.21
LINC00958-203ENST00000527945 IFT172Q9UG01 1749 aa13.72□□□□□ -0.21
LINC00958-203ENST00000527945 NEXMIFQ5QGS0 1516 aa13.71□□□□□ -0.21
LINC00958-203ENST00000527945 NRXN3Q9Y4C0 1643 aa13.71□□□□□ -0.22
LINC00958-203ENST00000527945 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
LINC00958-203ENST00000527945 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
LINC00958-203ENST00000527945 PPLO60437 1756 aa13.7□□□□□ -0.22
LINC00958-203ENST00000527945 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
LINC00958-203ENST00000527945 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
LINC00958-203ENST00000527945 NWD1Q149M9 1564 aa13.67□□□□□ -0.22
LINC00958-203ENST00000527945 PPP1R15AO75807 674 aaPredicted RBP13.67□□□□□ -0.22
LINC00958-203ENST00000527945 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
LINC00958-203ENST00000527945 HSPA1LP34931 641 aa13.67□□□□□ -0.22
LINC00958-203ENST00000527945 TRIM26Q12899 539 aaPredicted RBP13.67□□□□□ -0.22
LINC00958-203ENST00000527945 PIK3R4Q99570 1358 aa13.67□□□□□ -0.22
LINC00958-203ENST00000527945 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
LINC00958-203ENST00000527945 FAM135BQ49AJ0 1406 aa13.66□□□□□ -0.22
LINC00958-203ENST00000527945 SPATA31E1Q6ZUB1 1445 aa13.66□□□□□ -0.22
LINC00958-203ENST00000527945 RPGRIP1LQ68CZ1 1315 aa13.65□□□□□ -0.22
LINC00958-203ENST00000527945 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
LINC00958-203ENST00000527945 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
LINC00958-203ENST00000527945 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
LINC00958-203ENST00000527945 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
LINC00958-203ENST00000527945 DISP3Q9P2K9 1392 aa13.65□□□□□ -0.22
LINC00958-203ENST00000527945 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
LINC00958-203ENST00000527945 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
LINC00958-203ENST00000527945 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
LINC00958-203ENST00000527945 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
LINC00958-203ENST00000527945 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
LINC00958-203ENST00000527945 ILDR2Q71H61 639 aa13.62□□□□□ -0.23
LINC00958-203ENST00000527945 BCANQ96GW7 911 aa13.62□□□□□ -0.23
LINC00958-203ENST00000527945 CCDC144AA2RUR9 1427 aa13.62□□□□□ -0.23
LINC00958-203ENST00000527945 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
LINC00958-203ENST00000527945 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
LINC00958-203ENST00000527945 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
LINC00958-203ENST00000527945 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
LINC00958-203ENST00000527945 DHX57Q6P158 1386 aaKnown RBP13.59□□□□□ -0.23
LINC00958-203ENST00000527945 ADRA2BP18089 450 aa13.59□□□□□ -0.23
LINC00958-203ENST00000527945 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
LINC00958-203ENST00000527945 ASXL1Q8IXJ9 1541 aa13.56□□□□□ -0.24
LINC00958-203ENST00000527945 SOCS7O14512 581 aa13.56□□□□□ -0.24
LINC00958-203ENST00000527945 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
LINC00958-203ENST00000527945 MSH6P52701 1360 aa13.56□□□□□ -0.24
LINC00958-203ENST00000527945 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
LINC00958-203ENST00000527945 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
LINC00958-203ENST00000527945 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
LINC00958-203ENST00000527945 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
LINC00958-203ENST00000527945 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
LINC00958-203ENST00000527945 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
LINC00958-203ENST00000527945 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
LINC00958-203ENST00000527945 DCCP43146 1447 aa13.53□□□□□ -0.24
LINC00958-203ENST00000527945 MYOM2P54296 1465 aa13.53□□□□□ -0.24
LINC00958-203ENST00000527945 MED1Q15648 1581 aaPredicted RBP13.53□□□□□ -0.24
LINC00958-203ENST00000527945 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
LINC00958-203ENST00000527945 METP08581 1390 aa13.52□□□□□ -0.25
LINC00958-203ENST00000527945 PIK3C2GO75747 1445 aa13.51□□□□□ -0.25
LINC00958-203ENST00000527945 RGL3Q3MIN7 710 aa13.51□□□□□ -0.25
LINC00958-203ENST00000527945 CADPS2Q86UW7 1296 aa13.51□□□□□ -0.25
LINC00958-203ENST00000527945 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
LINC00958-203ENST00000527945 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
LINC00958-203ENST00000527945 SIN3AQ96ST3 1273 aa13.48□□□□□ -0.25
LINC00958-203ENST00000527945 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
LINC00958-203ENST00000527945 LAMC1P11047 1609 aa13.47□□□□□ -0.25
LINC00958-203ENST00000527945 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
LINC00958-203ENST00000527945 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.26
LINC00958-203ENST00000527945 PTCH1Q13635 1447 aa13.46□□□□□ -0.26
LINC00958-203ENST00000527945 ADGRB1O14514 1584 aa13.45□□□□□ -0.26
LINC00958-203ENST00000527945 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
LINC00958-203ENST00000527945 ATF3P18847 181 aa13.44□□□□□ -0.26
LINC00958-203ENST00000527945 JCADQ9P266 1359 aa13.44□□□□□ -0.26
LINC00958-203ENST00000527945 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
LINC00958-203ENST00000527945 ADGRL3Q9HAR2 1447 aa13.43□□□□□ -0.26
LINC00958-203ENST00000527945 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.43□□□□□ -0.26
LINC00958-203ENST00000527945 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
LINC00958-203ENST00000527945 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
LINC00958-203ENST00000527945 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
LINC00958-203ENST00000527945 SIRT1Q96EB6 747 aa13.42□□□□□ -0.26
LINC00958-203ENST00000527945 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
LINC00958-203ENST00000527945 MST1RQ04912 1400 aa13.41□□□□□ -0.26
LINC00958-203ENST00000527945 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
LINC00958-203ENST00000527945 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
LINC00958-203ENST00000527945 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms