RNA–Protein interactions for RNA: ENST00000527656.1

LRP4-202, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-202ENST00000527656 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
LRP4-202ENST00000527656 CHD2O14647 1828 aaKnown RBP23.61■■□□□ 1.37
LRP4-202ENST00000527656 UBAP1LF5GYI3 381 aa23.59■■□□□ 1.37
LRP4-202ENST00000527656 KIF1BO60333 1816 aa23.58■■□□□ 1.37
LRP4-202ENST00000527656 NRXN3Q9Y4C0 1643 aa23.58■■□□□ 1.36
LRP4-202ENST00000527656 PLEKHG1Q9ULL1 1385 aa23.55■■□□□ 1.36
LRP4-202ENST00000527656 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
LRP4-202ENST00000527656 SLC26A8Q96RN1 970 aa23.54■■□□□ 1.36
LRP4-202ENST00000527656 ADAMTS13Q76LX8 1427 aa23.52■■□□□ 1.36
LRP4-202ENST00000527656 NEXMIFQ5QGS0 1516 aa23.51■■□□□ 1.35
LRP4-202ENST00000527656 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
LRP4-202ENST00000527656 NUTM2DQ5VT03 806 aaPredicted RBP23.5■■□□□ 1.35
LRP4-202ENST00000527656 DIP2AQ14689 1571 aa23.49■■□□□ 1.35
LRP4-202ENST00000527656 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
LRP4-202ENST00000527656 SETBP1Q9Y6X0 1596 aa23.46■■□□□ 1.35
LRP4-202ENST00000527656 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
LRP4-202ENST00000527656 PPLO60437 1756 aa23.45■■□□□ 1.34
LRP4-202ENST00000527656 PPP1R15AO75807 674 aaPredicted RBP23.44■■□□□ 1.34
LRP4-202ENST00000527656 KCNA6P17658 529 aa23.44■■□□□ 1.34
LRP4-202ENST00000527656 PIP4K2BP78356 416 aa23.44■■□□□ 1.34
LRP4-202ENST00000527656 TRIM52Q96A61 297 aa23.44■■□□□ 1.34
LRP4-202ENST00000527656 TMEM94Q12767 1356 aa23.43■■□□□ 1.34
LRP4-202ENST00000527656 XRN1Q8IZH2 1706 aaKnown RBP23.43■■□□□ 1.34
LRP4-202ENST00000527656 TOM1O60784 492 aa23.42■■□□□ 1.34
LRP4-202ENST00000527656 RBM33Q96EV2 1170 aaKnown RBP23.42■■□□□ 1.34
LRP4-202ENST00000527656 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
LRP4-202ENST00000527656 PTPRUQ92729 1446 aa23.4■■□□□ 1.34
LRP4-202ENST00000527656 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
LRP4-202ENST00000527656 HSPA1LP34931 641 aa23.39■■□□□ 1.33
LRP4-202ENST00000527656 FOXD1Q16676 465 aa23.39■■□□□ 1.33
LRP4-202ENST00000527656 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.33
LRP4-202ENST00000527656 BCANQ96GW7 911 aa23.39■■□□□ 1.33
LRP4-202ENST00000527656 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
LRP4-202ENST00000527656 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
LRP4-202ENST00000527656 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
LRP4-202ENST00000527656 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
LRP4-202ENST00000527656 SETD5Q9C0A6 1442 aa23.34■■□□□ 1.33
LRP4-202ENST00000527656 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
LRP4-202ENST00000527656 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
LRP4-202ENST00000527656 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
LRP4-202ENST00000527656 PROSER2Q86WR7 435 aaPredicted RBP23.32■■□□□ 1.32
LRP4-202ENST00000527656 RAB3GAP2Q9H2M9 1393 aa23.31■■□□□ 1.32
LRP4-202ENST00000527656 MED1Q15648 1581 aaPredicted RBP23.31■■□□□ 1.32
LRP4-202ENST00000527656 METP08581 1390 aa23.29■■□□□ 1.32
LRP4-202ENST00000527656 MPHOSPH9Q99550 1183 aa23.29■■□□□ 1.32
LRP4-202ENST00000527656 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
LRP4-202ENST00000527656 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
LRP4-202ENST00000527656 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
LRP4-202ENST00000527656 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
LRP4-202ENST00000527656 MSH6P52701 1360 aa23.25■■□□□ 1.31
LRP4-202ENST00000527656 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
LRP4-202ENST00000527656 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
LRP4-202ENST00000527656 NCOA3Q9Y6Q9 1424 aa23.22■■□□□ 1.31
LRP4-202ENST00000527656 PHLPP1O60346 1717 aa23.21■■□□□ 1.31
LRP4-202ENST00000527656 ASXL1Q8IXJ9 1541 aa23.2■■□□□ 1.3
LRP4-202ENST00000527656 ILDR2Q71H61 639 aa23.18■■□□□ 1.3
LRP4-202ENST00000527656 COL16A1Q07092 1604 aaPredicted RBP23.18■■□□□ 1.3
LRP4-202ENST00000527656 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
LRP4-202ENST00000527656 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
LRP4-202ENST00000527656 ADGRF5Q8IZF2 1346 aa23.14■■□□□ 1.3
LRP4-202ENST00000527656 KNDC1Q76NI1 1749 aa23.14■■□□□ 1.3
LRP4-202ENST00000527656 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
LRP4-202ENST00000527656 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
LRP4-202ENST00000527656 PIK3C2GO75747 1445 aa23.12■■□□□ 1.29
LRP4-202ENST00000527656 DCCP43146 1447 aa23.12■■□□□ 1.29
LRP4-202ENST00000527656 ADGRL3Q9HAR2 1447 aa23.12■■□□□ 1.29
LRP4-202ENST00000527656 SLAIN2Q9P270 581 aa23.12■■□□□ 1.29
LRP4-202ENST00000527656 ROBO2Q9HCK4 1378 aa23.12■■□□□ 1.29
LRP4-202ENST00000527656 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
LRP4-202ENST00000527656 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
LRP4-202ENST00000527656 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
LRP4-202ENST00000527656 C14orf37Q86TY3 774 aa23.1■■□□□ 1.29
LRP4-202ENST00000527656 MST1RQ04912 1400 aa23.09■■□□□ 1.29
LRP4-202ENST00000527656 C19orf44Q9H6X5 657 aa23.09■■□□□ 1.29
LRP4-202ENST00000527656 ANKRD30BQ9BXX2 1392 aa23.09■■□□□ 1.29
LRP4-202ENST00000527656 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
LRP4-202ENST00000527656 MYOM2P54296 1465 aa23.07■■□□□ 1.28
LRP4-202ENST00000527656 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
LRP4-202ENST00000527656 LAMC1P11047 1609 aa23.06■■□□□ 1.28
LRP4-202ENST00000527656 CADPS2Q86UW7 1296 aa23.05■■□□□ 1.28
LRP4-202ENST00000527656 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
LRP4-202ENST00000527656 TECPR2O15040 1411 aa23.03■■□□□ 1.28
LRP4-202ENST00000527656 ATF3P18847 181 aa23.03■■□□□ 1.28
LRP4-202ENST00000527656 CDC42BPGQ6DT37 1551 aa23.01■■□□□ 1.27
LRP4-202ENST00000527656 HRCP23327 699 aa23■■□□□ 1.27
LRP4-202ENST00000527656 BRINP3Q76B58 766 aa23■■□□□ 1.27
LRP4-202ENST00000527656 LRPPRCP42704 1394 aaKnown RBP22.97■■□□□ 1.27
LRP4-202ENST00000527656 LRP6O75581 1613 aa22.97■■□□□ 1.27
LRP4-202ENST00000527656 TMEM132EQ6IEE7 984 aa22.96■■□□□ 1.27
LRP4-202ENST00000527656 PLEKHH1Q9ULM0 1364 aa22.96■■□□□ 1.27
LRP4-202ENST00000527656 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
LRP4-202ENST00000527656 ADGRB1O14514 1584 aa22.96■■□□□ 1.27
LRP4-202ENST00000527656 YTHDC2Q9H6S0 1430 aaKnown RBP22.95■■□□□ 1.26
LRP4-202ENST00000527656 FMN2Q9NZ56 1722 aa22.95■■□□□ 1.26
LRP4-202ENST00000527656 RGPD8O14715 1765 aaPredicted RBP22.94■■□□□ 1.26
LRP4-202ENST00000527656 JCADQ9P266 1359 aa22.93■■□□□ 1.26
LRP4-202ENST00000527656 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
LRP4-202ENST00000527656 ABCC11Q96J66 1382 aa22.92■■□□□ 1.26
LRP4-202ENST00000527656 DHX57Q6P158 1386 aaKnown RBP22.91■■□□□ 1.26
LRP4-202ENST00000527656 DDX17Q92841 729 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms