RNA–Protein interactions for RNA: ENST00000527653.1

GPAA1-209, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-209ENST00000527653 FOXD1Q16676 465 aa28.29■■■□□ 2.12
GPAA1-209ENST00000527653 ZNF326Q5BKZ1 582 aaKnown RBP28.29■■■□□ 2.12
GPAA1-209ENST00000527653 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.29■■■□□ 2.12
GPAA1-209ENST00000527653 BCANQ96GW7 911 aa28.28■■■□□ 2.12
GPAA1-209ENST00000527653 LTKP29376 864 aa28.27■■■□□ 2.12
GPAA1-209ENST00000527653 ZFYVE9O95405 1425 aa28.24■■■□□ 2.11
GPAA1-209ENST00000527653 ZNF335Q9H4Z2 1342 aaPredicted RBP28.2■■■□□ 2.11
GPAA1-209ENST00000527653 PLEKHG1Q9ULL1 1385 aa28.19■■■□□ 2.1
GPAA1-209ENST00000527653 CERKQ8TCT0 537 aa28.16■■■□□ 2.1
GPAA1-209ENST00000527653 LTBP4Q8N2S1 1624 aa28.16■■■□□ 2.1
GPAA1-209ENST00000527653 CPS1P31327 1500 aa28.16■■■□□ 2.1
GPAA1-209ENST00000527653 NUTM2DQ5VT03 806 aaPredicted RBP28.15■■■□□ 2.1
GPAA1-209ENST00000527653 NEXMIFQ5QGS0 1516 aa28.13■■■□□ 2.09
GPAA1-209ENST00000527653 DIP2AQ14689 1571 aa28.11■■■□□ 2.09
GPAA1-209ENST00000527653 SLC26A8Q96RN1 970 aa28.11■■■□□ 2.09
GPAA1-209ENST00000527653 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
GPAA1-209ENST00000527653 RPGRIP1LQ68CZ1 1315 aa28.11■■■□□ 2.09
GPAA1-209ENST00000527653 PPLO60437 1756 aa28.09■■■□□ 2.09
GPAA1-209ENST00000527653 IQSEC2Q5JU85 1478 aa28.08■■■□□ 2.09
GPAA1-209ENST00000527653 VGFO15240 615 aaPredicted RBP28.07■■■□□ 2.08
GPAA1-209ENST00000527653 RGL3Q3MIN7 710 aa28.05■■■□□ 2.08
GPAA1-209ENST00000527653 ANKRD30BQ9BXX2 1392 aa28.05■■■□□ 2.08
GPAA1-209ENST00000527653 SETBP1Q9Y6X0 1596 aa28.04■■■□□ 2.08
GPAA1-209ENST00000527653 SPATA31E1Q6ZUB1 1445 aa28.03■■■□□ 2.08
GPAA1-209ENST00000527653 STRCP1A6NGW2 1772 aa28.01■■■□□ 2.08
GPAA1-209ENST00000527653 TBX22Q9Y458 520 aa28.01■■■□□ 2.07
GPAA1-209ENST00000527653 IFT172Q9UG01 1749 aa28.01■■■□□ 2.07
GPAA1-209ENST00000527653 ADAMTS13Q76LX8 1427 aa27.99■■■□□ 2.07
GPAA1-209ENST00000527653 NWD1Q149M9 1564 aa27.99■■■□□ 2.07
GPAA1-209ENST00000527653 KCNA6P17658 529 aa27.98■■■□□ 2.07
GPAA1-209ENST00000527653 FBXO41Q8TF61 875 aa27.98■■■□□ 2.07
GPAA1-209ENST00000527653 NRXN3Q9Y4C0 1643 aa27.98■■■□□ 2.07
GPAA1-209ENST00000527653 PIK3R4Q99570 1358 aa27.98■■■□□ 2.07
GPAA1-209ENST00000527653 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
GPAA1-209ENST00000527653 NKTRP30414 1462 aaKnown RBP27.97■■■□□ 2.07
GPAA1-209ENST00000527653 LRRC7Q96NW7 1537 aa27.93■■■□□ 2.06
GPAA1-209ENST00000527653 PROSER2Q86WR7 435 aaPredicted RBP27.89■■■□□ 2.06
GPAA1-209ENST00000527653 MYOM2P54296 1465 aa27.89■■■□□ 2.05
GPAA1-209ENST00000527653 ALKQ9UM73 1620 aa27.88■■■□□ 2.05
GPAA1-209ENST00000527653 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
GPAA1-209ENST00000527653 UBAP1LF5GYI3 381 aa27.86■■■□□ 2.05
GPAA1-209ENST00000527653 PCGF6Q9BYE7 350 aa27.86■■■□□ 2.05
GPAA1-209ENST00000527653 LAMC1P11047 1609 aa27.85■■■□□ 2.05
GPAA1-209ENST00000527653 ADGRF5Q8IZF2 1346 aa27.85■■■□□ 2.05
GPAA1-209ENST00000527653 SETD1AO15047 1707 aaKnown RBP27.84■■■□□ 2.05
GPAA1-209ENST00000527653 TOM1O60784 492 aa27.84■■■□□ 2.05
GPAA1-209ENST00000527653 ILDR1Q86SU0 546 aaPredicted RBP27.84■■■□□ 2.05
GPAA1-209ENST00000527653 AMOTL2Q9Y2J4 779 aa27.84■■■□□ 2.05
GPAA1-209ENST00000527653 TMEM94Q12767 1356 aa27.84■■■□□ 2.05
GPAA1-209ENST00000527653 XRN1Q8IZH2 1706 aaKnown RBP27.83■■■□□ 2.05
GPAA1-209ENST00000527653 XIRP1Q702N8 1843 aaKnown RBP27.83■■■□□ 2.05
GPAA1-209ENST00000527653 PIK3C2GO75747 1445 aa27.83■■■□□ 2.05
GPAA1-209ENST00000527653 DCAF11Q8TEB1 546 aa27.82■■■□□ 2.04
GPAA1-209ENST00000527653 STAC3Q96MF2 364 aa27.82■■■□□ 2.04
GPAA1-209ENST00000527653 METP08581 1390 aa27.82■■■□□ 2.04
GPAA1-209ENST00000527653 C14orf37Q86TY3 774 aa27.81■■■□□ 2.04
GPAA1-209ENST00000527653 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
GPAA1-209ENST00000527653 MSH6P52701 1360 aa27.78■■■□□ 2.04
GPAA1-209ENST00000527653 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
GPAA1-209ENST00000527653 KDM2AQ9Y2K7 1162 aa27.78■■■□□ 2.04
GPAA1-209ENST00000527653 NRXN1Q9ULB1 1477 aa27.76■■■□□ 2.04
GPAA1-209ENST00000527653 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
GPAA1-209ENST00000527653 RBM33Q96EV2 1170 aaKnown RBP27.74■■■□□ 2.03
GPAA1-209ENST00000527653 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
GPAA1-209ENST00000527653 PIP4K2BP78356 416 aa27.71■■■□□ 2.03
GPAA1-209ENST00000527653 PTCH1Q13635 1447 aa27.71■■■□□ 2.03
GPAA1-209ENST00000527653 KNDC1Q76NI1 1749 aa27.69■■■□□ 2.02
GPAA1-209ENST00000527653 SIN3AQ96ST3 1273 aa27.68■■■□□ 2.02
GPAA1-209ENST00000527653 C14orf93Q9H972 538 aaKnown RBP27.68■■■□□ 2.02
GPAA1-209ENST00000527653 PRAG1Q86YV5 1406 aa27.67■■■□□ 2.02
GPAA1-209ENST00000527653 CFAP70Q5T0N1 1121 aa27.66■■■□□ 2.02
GPAA1-209ENST00000527653 ASXL1Q8IXJ9 1541 aa27.66■■■□□ 2.02
GPAA1-209ENST00000527653 LRPPRCP42704 1394 aaKnown RBP27.65■■■□□ 2.02
GPAA1-209ENST00000527653 STK26Q9P289 416 aa27.65■■■□□ 2.02
GPAA1-209ENST00000527653 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.64■■■□□ 2.02
GPAA1-209ENST00000527653 ATF3P18847 181 aa27.64■■■□□ 2.02
GPAA1-209ENST00000527653 TMEM132EQ6IEE7 984 aa27.64■■■□□ 2.02
GPAA1-209ENST00000527653 YTHDC2Q9H6S0 1430 aaKnown RBP27.64■■■□□ 2.02
GPAA1-209ENST00000527653 C19orf44Q9H6X5 657 aa27.63■■■□□ 2.01
GPAA1-209ENST00000527653 TONSLQ96HA7 1378 aa27.62■■■□□ 2.01
GPAA1-209ENST00000527653 CADPS2Q86UW7 1296 aa27.62■■■□□ 2.01
GPAA1-209ENST00000527653 NALCNQ8IZF0 1738 aa27.61■■■□□ 2.01
GPAA1-209ENST00000527653 TECPR2O15040 1411 aa27.61■■■□□ 2.01
GPAA1-209ENST00000527653 DCCP43146 1447 aa27.61■■■□□ 2.01
GPAA1-209ENST00000527653 ADGRL3Q9HAR2 1447 aa27.61■■■□□ 2.01
GPAA1-209ENST00000527653 KIAA1210Q9ULL0 1709 aa27.61■■■□□ 2.01
GPAA1-209ENST00000527653 ROBO2Q9HCK4 1378 aa27.6■■■□□ 2.01
GPAA1-209ENST00000527653 ABCC11Q96J66 1382 aa27.6■■■□□ 2.01
GPAA1-209ENST00000527653 L3MBTL2Q969R5 705 aa27.59■■■□□ 2.01
GPAA1-209ENST00000527653 ADGRB1O14514 1584 aa27.56■■■□□ 2
GPAA1-209ENST00000527653 ROBO1Q9Y6N7 1651 aa27.53■■■□□ 2
GPAA1-209ENST00000527653 FAM135BQ49AJ0 1406 aa27.53■■■□□ 2
GPAA1-209ENST00000527653 SLAIN2Q9P270 581 aa27.53■■■□□ 2
GPAA1-209ENST00000527653 DLC1Q96QB1 1528 aa27.52■■■□□ 2
GPAA1-209ENST00000527653 CLSPNQ9HAW4 1339 aa27.51■■□□□ 1.99
GPAA1-209ENST00000527653 POGKQ9P215 609 aa27.5■■□□□ 1.99
GPAA1-209ENST00000527653 CDC42BPGQ6DT37 1551 aa27.49■■□□□ 1.99
GPAA1-209ENST00000527653 CCER1Q8TC90 406 aaPredicted RBP27.49■■□□□ 1.99
GPAA1-209ENST00000527653 SIRT1Q96EB6 747 aa27.49■■□□□ 1.99
GPAA1-209ENST00000527653 TRAK1Q9UPV9 953 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms