RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
CTSB-214ENST00000527243 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
CTSB-214ENST00000527243 CHGAP10645 457 aaKnown RBP16.69■□□□□ 0.26
CTSB-214ENST00000527243 ILDR1Q86SU0 546 aaPredicted RBP16.69■□□□□ 0.26
CTSB-214ENST00000527243 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
CTSB-214ENST00000527243 CPS1P31327 1500 aa16.67■□□□□ 0.26
CTSB-214ENST00000527243 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSB-214ENST00000527243 HDGFP51858 240 aaKnown RBP16.66■□□□□ 0.26
CTSB-214ENST00000527243 ADAMTS13Q76LX8 1427 aa16.64■□□□□ 0.25
CTSB-214ENST00000527243 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
CTSB-214ENST00000527243 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
CTSB-214ENST00000527243 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
CTSB-214ENST00000527243 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
CTSB-214ENST00000527243 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
CTSB-214ENST00000527243 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
CTSB-214ENST00000527243 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
CTSB-214ENST00000527243 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
CTSB-214ENST00000527243 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
CTSB-214ENST00000527243 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
CTSB-214ENST00000527243 KCNA6P17658 529 aa16.6■□□□□ 0.25
CTSB-214ENST00000527243 KIF1BO60333 1816 aa16.59■□□□□ 0.25
CTSB-214ENST00000527243 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
CTSB-214ENST00000527243 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
CTSB-214ENST00000527243 NWD1Q149M9 1564 aa16.59■□□□□ 0.25
CTSB-214ENST00000527243 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
CTSB-214ENST00000527243 DIP2AQ14689 1571 aa16.58■□□□□ 0.24
CTSB-214ENST00000527243 NRXN3Q9Y4C0 1643 aa16.58■□□□□ 0.24
CTSB-214ENST00000527243 PIK3R4Q99570 1358 aa16.56■□□□□ 0.24
CTSB-214ENST00000527243 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
CTSB-214ENST00000527243 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
CTSB-214ENST00000527243 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
CTSB-214ENST00000527243 BCANQ96GW7 911 aa16.54■□□□□ 0.24
CTSB-214ENST00000527243 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
CTSB-214ENST00000527243 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
CTSB-214ENST00000527243 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.24
CTSB-214ENST00000527243 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
CTSB-214ENST00000527243 METP08581 1390 aa16.51■□□□□ 0.23
CTSB-214ENST00000527243 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
CTSB-214ENST00000527243 PPLO60437 1756 aa16.51■□□□□ 0.23
CTSB-214ENST00000527243 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
CTSB-214ENST00000527243 RGL3Q3MIN7 710 aa16.5■□□□□ 0.23
CTSB-214ENST00000527243 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
CTSB-214ENST00000527243 ADGRF5Q8IZF2 1346 aa16.49■□□□□ 0.23
CTSB-214ENST00000527243 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
CTSB-214ENST00000527243 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
CTSB-214ENST00000527243 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
CTSB-214ENST00000527243 IFT172Q9UG01 1749 aa16.48■□□□□ 0.23
CTSB-214ENST00000527243 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
CTSB-214ENST00000527243 XRN1Q8IZH2 1706 aaKnown RBP16.47■□□□□ 0.23
CTSB-214ENST00000527243 PRAG1Q86YV5 1406 aa16.46■□□□□ 0.23
CTSB-214ENST00000527243 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
CTSB-214ENST00000527243 TOM1O60784 492 aa16.46■□□□□ 0.23
CTSB-214ENST00000527243 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
CTSB-214ENST00000527243 RBM33Q96EV2 1170 aaKnown RBP16.45■□□□□ 0.22
CTSB-214ENST00000527243 MYOM2P54296 1465 aa16.45■□□□□ 0.22
CTSB-214ENST00000527243 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
CTSB-214ENST00000527243 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
CTSB-214ENST00000527243 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
CTSB-214ENST00000527243 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
CTSB-214ENST00000527243 MSH6P52701 1360 aa16.38■□□□□ 0.21
CTSB-214ENST00000527243 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
CTSB-214ENST00000527243 TECPR2O15040 1411 aa16.38■□□□□ 0.21
CTSB-214ENST00000527243 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
CTSB-214ENST00000527243 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
CTSB-214ENST00000527243 C19orf44Q9H6X5 657 aa16.37■□□□□ 0.21
CTSB-214ENST00000527243 LRPPRCP42704 1394 aaKnown RBP16.37■□□□□ 0.21
CTSB-214ENST00000527243 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
CTSB-214ENST00000527243 ABCC11Q96J66 1382 aa16.36■□□□□ 0.21
CTSB-214ENST00000527243 DCCP43146 1447 aa16.36■□□□□ 0.21
CTSB-214ENST00000527243 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
CTSB-214ENST00000527243 DCAF11Q8TEB1 546 aa16.35■□□□□ 0.21
CTSB-214ENST00000527243 ADGRL3Q9HAR2 1447 aa16.35■□□□□ 0.21
CTSB-214ENST00000527243 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
CTSB-214ENST00000527243 HSPA1LP34931 641 aa16.33■□□□□ 0.2
CTSB-214ENST00000527243 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
CTSB-214ENST00000527243 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
CTSB-214ENST00000527243 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
CTSB-214ENST00000527243 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.2
CTSB-214ENST00000527243 LAMC1P11047 1609 aa16.32■□□□□ 0.2
CTSB-214ENST00000527243 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
CTSB-214ENST00000527243 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
CTSB-214ENST00000527243 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
CTSB-214ENST00000527243 KDM2AQ9Y2K7 1162 aa16.31■□□□□ 0.2
CTSB-214ENST00000527243 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
CTSB-214ENST00000527243 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
CTSB-214ENST00000527243 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
CTSB-214ENST00000527243 MST1RQ04912 1400 aa16.28■□□□□ 0.2
CTSB-214ENST00000527243 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
CTSB-214ENST00000527243 ATF3P18847 181 aa16.28■□□□□ 0.2
CTSB-214ENST00000527243 STK26Q9P289 416 aa16.28■□□□□ 0.2
CTSB-214ENST00000527243 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
CTSB-214ENST00000527243 L3MBTL2Q969R5 705 aa16.27■□□□□ 0.2
CTSB-214ENST00000527243 ROBO1Q9Y6N7 1651 aa16.27■□□□□ 0.19
CTSB-214ENST00000527243 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
CTSB-214ENST00000527243 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
CTSB-214ENST00000527243 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
CTSB-214ENST00000527243 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
CTSB-214ENST00000527243 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
CTSB-214ENST00000527243 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
CTSB-214ENST00000527243 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms