RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 CERKQ8TCT0 537 aa28.93■■■□□ 2.22
TTC39A-215ENST00000527205 NEXMIFQ5QGS0 1516 aa28.91■■■□□ 2.22
TTC39A-215ENST00000527205 NUTM2DQ5VT03 806 aaPredicted RBP28.89■■■□□ 2.22
TTC39A-215ENST00000527205 SENP3Q9H4L4 574 aaPredicted RBP28.89■■■□□ 2.22
TTC39A-215ENST00000527205 PPLO60437 1756 aa28.87■■■□□ 2.21
TTC39A-215ENST00000527205 NRXN3Q9Y4C0 1643 aa28.87■■■□□ 2.21
TTC39A-215ENST00000527205 ACIN1Q9UKV3 1341 aaKnown RBP28.86■■■□□ 2.21
TTC39A-215ENST00000527205 PLEKHG1Q9ULL1 1385 aa28.86■■■□□ 2.21
TTC39A-215ENST00000527205 CPS1P31327 1500 aa28.84■■■□□ 2.21
TTC39A-215ENST00000527205 IFT172Q9UG01 1749 aa28.83■■■□□ 2.21
TTC39A-215ENST00000527205 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
TTC39A-215ENST00000527205 HRCP23327 699 aa28.83■■■□□ 2.21
TTC39A-215ENST00000527205 CCDC144AA2RUR9 1427 aa28.82■■■□□ 2.2
TTC39A-215ENST00000527205 CHD2O14647 1828 aaKnown RBP28.82■■■□□ 2.2
TTC39A-215ENST00000527205 PPP1R15AO75807 674 aaPredicted RBP28.81■■■□□ 2.2
TTC39A-215ENST00000527205 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
TTC39A-215ENST00000527205 IQSEC2Q5JU85 1478 aa28.8■■■□□ 2.2
TTC39A-215ENST00000527205 ZNF326Q5BKZ1 582 aaKnown RBP28.8■■■□□ 2.2
TTC39A-215ENST00000527205 ILDR1Q86SU0 546 aaPredicted RBP28.8■■■□□ 2.2
TTC39A-215ENST00000527205 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
TTC39A-215ENST00000527205 ADAMTS13Q76LX8 1427 aa28.79■■■□□ 2.2
TTC39A-215ENST00000527205 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.79■■■□□ 2.2
TTC39A-215ENST00000527205 DIP2AQ14689 1571 aa28.77■■■□□ 2.2
TTC39A-215ENST00000527205 SETBP1Q9Y6X0 1596 aa28.77■■■□□ 2.2
TTC39A-215ENST00000527205 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
TTC39A-215ENST00000527205 LRRC7Q96NW7 1537 aa28.75■■■□□ 2.19
TTC39A-215ENST00000527205 HDGFP51858 240 aaKnown RBP28.75■■■□□ 2.19
TTC39A-215ENST00000527205 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
TTC39A-215ENST00000527205 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
TTC39A-215ENST00000527205 BCANQ96GW7 911 aa28.74■■■□□ 2.19
TTC39A-215ENST00000527205 ANKRD30BQ9BXX2 1392 aa28.72■■■□□ 2.19
TTC39A-215ENST00000527205 TRIM26Q12899 539 aaPredicted RBP28.67■■■□□ 2.18
TTC39A-215ENST00000527205 ALKQ9UM73 1620 aa28.66■■■□□ 2.18
TTC39A-215ENST00000527205 TBX22Q9Y458 520 aa28.65■■■□□ 2.18
TTC39A-215ENST00000527205 XRN1Q8IZH2 1706 aaKnown RBP28.65■■■□□ 2.18
TTC39A-215ENST00000527205 PTPRUQ92729 1446 aa28.64■■■□□ 2.18
TTC39A-215ENST00000527205 KCNA6P17658 529 aa28.64■■■□□ 2.18
TTC39A-215ENST00000527205 RGL3Q3MIN7 710 aa28.64■■■□□ 2.18
TTC39A-215ENST00000527205 NKTRP30414 1462 aaKnown RBP28.64■■■□□ 2.17
TTC39A-215ENST00000527205 RPGRIP1LQ68CZ1 1315 aa28.63■■■□□ 2.17
TTC39A-215ENST00000527205 ADGRF5Q8IZF2 1346 aa28.58■■■□□ 2.17
TTC39A-215ENST00000527205 METP08581 1390 aa28.58■■■□□ 2.17
TTC39A-215ENST00000527205 PIK3R4Q99570 1358 aa28.57■■■□□ 2.16
TTC39A-215ENST00000527205 VGFO15240 615 aaPredicted RBP28.56■■■□□ 2.16
TTC39A-215ENST00000527205 TMEM94Q12767 1356 aa28.56■■■□□ 2.16
TTC39A-215ENST00000527205 RBM33Q96EV2 1170 aaKnown RBP28.56■■■□□ 2.16
TTC39A-215ENST00000527205 UBAP1LF5GYI3 381 aa28.54■■■□□ 2.16
TTC39A-215ENST00000527205 PROSER2Q86WR7 435 aaPredicted RBP28.52■■■□□ 2.16
TTC39A-215ENST00000527205 ASXL1Q8IXJ9 1541 aa28.52■■■□□ 2.16
TTC39A-215ENST00000527205 MYOM2P54296 1465 aa28.52■■■□□ 2.16
TTC39A-215ENST00000527205 PIK3C2GO75747 1445 aa28.51■■■□□ 2.15
TTC39A-215ENST00000527205 NRXN1Q9ULB1 1477 aa28.5■■■□□ 2.15
TTC39A-215ENST00000527205 AMOTL2Q9Y2J4 779 aa28.49■■■□□ 2.15
TTC39A-215ENST00000527205 DHX57Q6P158 1386 aaKnown RBP28.49■■■□□ 2.15
TTC39A-215ENST00000527205 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.46■■■□□ 2.15
TTC39A-215ENST00000527205 LAMC1P11047 1609 aa28.44■■■□□ 2.14
TTC39A-215ENST00000527205 NALCNQ8IZF0 1738 aa28.44■■■□□ 2.14
TTC39A-215ENST00000527205 KNDC1Q76NI1 1749 aa28.43■■■□□ 2.14
TTC39A-215ENST00000527205 TOM1O60784 492 aa28.4■■■□□ 2.14
TTC39A-215ENST00000527205 PIP4K2BP78356 416 aa28.39■■■□□ 2.14
TTC39A-215ENST00000527205 PRAG1Q86YV5 1406 aa28.38■■■□□ 2.13
TTC39A-215ENST00000527205 PTCH1Q13635 1447 aa28.37■■■□□ 2.13
TTC39A-215ENST00000527205 NCOA3Q9Y6Q9 1424 aa28.36■■■□□ 2.13
TTC39A-215ENST00000527205 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
TTC39A-215ENST00000527205 MSH6P52701 1360 aa28.36■■■□□ 2.13
TTC39A-215ENST00000527205 ROBO2Q9HCK4 1378 aa28.36■■■□□ 2.13
TTC39A-215ENST00000527205 DCAF11Q8TEB1 546 aa28.35■■■□□ 2.13
TTC39A-215ENST00000527205 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
TTC39A-215ENST00000527205 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
TTC39A-215ENST00000527205 ROBO1Q9Y6N7 1651 aa28.34■■■□□ 2.13
TTC39A-215ENST00000527205 CFAP70Q5T0N1 1121 aa28.33■■■□□ 2.13
TTC39A-215ENST00000527205 TMEM132EQ6IEE7 984 aa28.33■■■□□ 2.13
TTC39A-215ENST00000527205 C14orf93Q9H972 538 aaKnown RBP28.32■■■□□ 2.12
TTC39A-215ENST00000527205 ADGRB1O14514 1584 aa28.31■■■□□ 2.12
TTC39A-215ENST00000527205 LRPPRCP42704 1394 aaKnown RBP28.3■■■□□ 2.12
TTC39A-215ENST00000527205 TECPR2O15040 1411 aa28.29■■■□□ 2.12
TTC39A-215ENST00000527205 YTHDC2Q9H6S0 1430 aaKnown RBP28.29■■■□□ 2.12
TTC39A-215ENST00000527205 ADGRL3Q9HAR2 1447 aa28.29■■■□□ 2.12
TTC39A-215ENST00000527205 C14orf37Q86TY3 774 aa28.28■■■□□ 2.12
TTC39A-215ENST00000527205 PCGF6Q9BYE7 350 aa28.28■■■□□ 2.12
TTC39A-215ENST00000527205 KIAA1210Q9ULL0 1709 aa28.26■■■□□ 2.12
TTC39A-215ENST00000527205 STK26Q9P289 416 aa28.26■■■□□ 2.11
TTC39A-215ENST00000527205 HSPA1LP34931 641 aa28.23■■■□□ 2.11
TTC39A-215ENST00000527205 NEUROD1Q13562 356 aa28.23■■■□□ 2.11
TTC39A-215ENST00000527205 C19orf44Q9H6X5 657 aa28.23■■■□□ 2.11
TTC39A-215ENST00000527205 DCCP43146 1447 aa28.23■■■□□ 2.11
TTC39A-215ENST00000527205 ABCC11Q96J66 1382 aa28.23■■■□□ 2.11
TTC39A-215ENST00000527205 PLEKHH1Q9ULM0 1364 aa28.23■■■□□ 2.11
TTC39A-215ENST00000527205 FAM135BQ49AJ0 1406 aa28.21■■■□□ 2.11
TTC39A-215ENST00000527205 ARHGEF28Q8N1W1 1705 aaKnown RBP28.21■■■□□ 2.11
TTC39A-215ENST00000527205 MST1RQ04912 1400 aa28.19■■■□□ 2.1
TTC39A-215ENST00000527205 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
TTC39A-215ENST00000527205 STAC3Q96MF2 364 aa28.19■■■□□ 2.1
TTC39A-215ENST00000527205 WAPLQ7Z5K2 1190 aa28.18■■■□□ 2.1
TTC39A-215ENST00000527205 SLAIN2Q9P270 581 aa28.18■■■□□ 2.1
TTC39A-215ENST00000527205 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
TTC39A-215ENST00000527205 CDC42BPGQ6DT37 1551 aa28.17■■■□□ 2.1
TTC39A-215ENST00000527205 PHLPP1O60346 1717 aa28.17■■■□□ 2.1
TTC39A-215ENST00000527205 ATF3P18847 181 aa28.16■■■□□ 2.1
TTC39A-215ENST00000527205 CADPS2Q86UW7 1296 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms