RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.02■■□□□ 1.44
SSSCA1-202ENST00000526433 CLTCL1P53675 1640 aa24.02■■□□□ 1.44
SSSCA1-202ENST00000526433 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
SSSCA1-202ENST00000526433 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
SSSCA1-202ENST00000526433 PPP1R15AO75807 674 aaPredicted RBP24■■□□□ 1.43
SSSCA1-202ENST00000526433 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
SSSCA1-202ENST00000526433 BCANQ96GW7 911 aa24■■□□□ 1.43
SSSCA1-202ENST00000526433 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
SSSCA1-202ENST00000526433 KIF1BO60333 1816 aa23.98■■□□□ 1.43
SSSCA1-202ENST00000526433 SLC26A8Q96RN1 970 aa23.97■■□□□ 1.43
SSSCA1-202ENST00000526433 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.42
SSSCA1-202ENST00000526433 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
SSSCA1-202ENST00000526433 PLEKHG1Q9ULL1 1385 aa23.94■■□□□ 1.42
SSSCA1-202ENST00000526433 TRIM26Q12899 539 aaPredicted RBP23.91■■□□□ 1.42
SSSCA1-202ENST00000526433 CCDC144AA2RUR9 1427 aa23.91■■□□□ 1.42
SSSCA1-202ENST00000526433 CPS1P31327 1500 aa23.89■■□□□ 1.41
SSSCA1-202ENST00000526433 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
SSSCA1-202ENST00000526433 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
SSSCA1-202ENST00000526433 RPGRIP1LQ68CZ1 1315 aa23.87■■□□□ 1.41
SSSCA1-202ENST00000526433 KCNA6P17658 529 aa23.86■■□□□ 1.41
SSSCA1-202ENST00000526433 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
SSSCA1-202ENST00000526433 IQSEC2Q5JU85 1478 aa23.86■■□□□ 1.41
SSSCA1-202ENST00000526433 NEXMIFQ5QGS0 1516 aa23.84■■□□□ 1.41
SSSCA1-202ENST00000526433 ANKRD30BQ9BXX2 1392 aa23.84■■□□□ 1.41
SSSCA1-202ENST00000526433 VGFO15240 615 aaPredicted RBP23.84■■□□□ 1.41
SSSCA1-202ENST00000526433 ADAMTS13Q76LX8 1427 aa23.84■■□□□ 1.41
SSSCA1-202ENST00000526433 SPATA31E1Q6ZUB1 1445 aa23.82■■□□□ 1.4
SSSCA1-202ENST00000526433 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
SSSCA1-202ENST00000526433 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
SSSCA1-202ENST00000526433 CHD2O14647 1828 aaKnown RBP23.77■■□□□ 1.4
SSSCA1-202ENST00000526433 UBAP1LF5GYI3 381 aa23.77■■□□□ 1.4
SSSCA1-202ENST00000526433 PPLO60437 1756 aa23.76■■□□□ 1.39
SSSCA1-202ENST00000526433 SETBP1Q9Y6X0 1596 aa23.76■■□□□ 1.39
SSSCA1-202ENST00000526433 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
SSSCA1-202ENST00000526433 NRXN3Q9Y4C0 1643 aa23.75■■□□□ 1.39
SSSCA1-202ENST00000526433 PIK3R4Q99570 1358 aa23.75■■□□□ 1.39
SSSCA1-202ENST00000526433 AMOTL2Q9Y2J4 779 aa23.73■■□□□ 1.39
SSSCA1-202ENST00000526433 RBM33Q96EV2 1170 aaKnown RBP23.72■■□□□ 1.39
SSSCA1-202ENST00000526433 ADGRF5Q8IZF2 1346 aa23.72■■□□□ 1.39
SSSCA1-202ENST00000526433 NWD1Q149M9 1564 aa23.72■■□□□ 1.39
SSSCA1-202ENST00000526433 TOM1O60784 492 aa23.71■■□□□ 1.39
SSSCA1-202ENST00000526433 PTPRUQ92729 1446 aa23.7■■□□□ 1.38
SSSCA1-202ENST00000526433 METP08581 1390 aa23.7■■□□□ 1.38
SSSCA1-202ENST00000526433 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
SSSCA1-202ENST00000526433 XIRP1Q702N8 1843 aaKnown RBP23.69■■□□□ 1.38
SSSCA1-202ENST00000526433 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
SSSCA1-202ENST00000526433 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
SSSCA1-202ENST00000526433 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
SSSCA1-202ENST00000526433 PIP4K2BP78356 416 aa23.64■■□□□ 1.37
SSSCA1-202ENST00000526433 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
SSSCA1-202ENST00000526433 KDM2AQ9Y2K7 1162 aa23.62■■□□□ 1.37
SSSCA1-202ENST00000526433 SCAF1Q9H7N4 1312 aaKnown RBP23.61■■□□□ 1.37
SSSCA1-202ENST00000526433 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
SSSCA1-202ENST00000526433 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
SSSCA1-202ENST00000526433 DHX57Q6P158 1386 aaKnown RBP23.59■■□□□ 1.37
SSSCA1-202ENST00000526433 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
SSSCA1-202ENST00000526433 PIK3C2GO75747 1445 aa23.59■■□□□ 1.37
SSSCA1-202ENST00000526433 NCOA3Q9Y6Q9 1424 aa23.59■■□□□ 1.37
SSSCA1-202ENST00000526433 STAC3Q96MF2 364 aa23.58■■□□□ 1.37
SSSCA1-202ENST00000526433 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
SSSCA1-202ENST00000526433 MYOM2P54296 1465 aa23.57■■□□□ 1.36
SSSCA1-202ENST00000526433 MSH6P52701 1360 aa23.57■■□□□ 1.36
SSSCA1-202ENST00000526433 TMEM132EQ6IEE7 984 aa23.57■■□□□ 1.36
SSSCA1-202ENST00000526433 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
SSSCA1-202ENST00000526433 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
SSSCA1-202ENST00000526433 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
SSSCA1-202ENST00000526433 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
SSSCA1-202ENST00000526433 C19orf44Q9H6X5 657 aa23.55■■□□□ 1.36
SSSCA1-202ENST00000526433 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
SSSCA1-202ENST00000526433 STK26Q9P289 416 aa23.53■■□□□ 1.36
SSSCA1-202ENST00000526433 ROBO2Q9HCK4 1378 aa23.51■■□□□ 1.35
SSSCA1-202ENST00000526433 ATF3P18847 181 aa23.5■■□□□ 1.35
SSSCA1-202ENST00000526433 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
SSSCA1-202ENST00000526433 LRPPRCP42704 1394 aaKnown RBP23.49■■□□□ 1.35
SSSCA1-202ENST00000526433 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.48■■□□□ 1.35
SSSCA1-202ENST00000526433 HSPA1LP34931 641 aa23.48■■□□□ 1.35
SSSCA1-202ENST00000526433 CADPS2Q86UW7 1296 aa23.48■■□□□ 1.35
SSSCA1-202ENST00000526433 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
SSSCA1-202ENST00000526433 PTCH1Q13635 1447 aa23.47■■□□□ 1.35
SSSCA1-202ENST00000526433 ASXL1Q8IXJ9 1541 aa23.47■■□□□ 1.35
SSSCA1-202ENST00000526433 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
SSSCA1-202ENST00000526433 L3MBTL2Q969R5 705 aa23.46■■□□□ 1.35
SSSCA1-202ENST00000526433 YTHDC2Q9H6S0 1430 aaKnown RBP23.46■■□□□ 1.35
SSSCA1-202ENST00000526433 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
SSSCA1-202ENST00000526433 LAMC1P11047 1609 aa23.44■■□□□ 1.34
SSSCA1-202ENST00000526433 WAPLQ7Z5K2 1190 aa23.44■■□□□ 1.34
SSSCA1-202ENST00000526433 SIRT1Q96EB6 747 aa23.43■■□□□ 1.34
SSSCA1-202ENST00000526433 TECPR2O15040 1411 aa23.42■■□□□ 1.34
SSSCA1-202ENST00000526433 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
SSSCA1-202ENST00000526433 DCCP43146 1447 aa23.4■■□□□ 1.34
SSSCA1-202ENST00000526433 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.33
SSSCA1-202ENST00000526433 KNDC1Q76NI1 1749 aa23.38■■□□□ 1.33
SSSCA1-202ENST00000526433 PLEKHH1Q9ULM0 1364 aa23.38■■□□□ 1.33
SSSCA1-202ENST00000526433 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
SSSCA1-202ENST00000526433 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
SSSCA1-202ENST00000526433 TRAK1Q9UPV9 953 aa23.37■■□□□ 1.33
SSSCA1-202ENST00000526433 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
SSSCA1-202ENST00000526433 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
SSSCA1-202ENST00000526433 POGKQ9P215 609 aa23.34■■□□□ 1.33
SSSCA1-202ENST00000526433 MST1RQ04912 1400 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms