RNA–Protein interactions for RNA: ENST00000526195.5

CTSB-210, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-210ENST00000526195 SETD5Q9C0A6 1442 aa24.12■■□□□ 1.45
CTSB-210ENST00000526195 STRCP1A6NGW2 1772 aa24.12■■□□□ 1.45
CTSB-210ENST00000526195 TRPM2O94759 1503 aa24.12■■□□□ 1.45
CTSB-210ENST00000526195 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
CTSB-210ENST00000526195 HDGFP51858 240 aaKnown RBP24.1■■□□□ 1.45
CTSB-210ENST00000526195 FOXD1Q16676 465 aa24.1■■□□□ 1.45
CTSB-210ENST00000526195 BCANQ96GW7 911 aa24.1■■□□□ 1.45
CTSB-210ENST00000526195 PLEKHG1Q9ULL1 1385 aa24.1■■□□□ 1.45
CTSB-210ENST00000526195 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
CTSB-210ENST00000526195 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
CTSB-210ENST00000526195 MPHOSPH9Q99550 1183 aa24.08■■□□□ 1.45
CTSB-210ENST00000526195 UBAP1LF5GYI3 381 aa24.07■■□□□ 1.44
CTSB-210ENST00000526195 RAB3GAP2Q9H2M9 1393 aa24.06■■□□□ 1.44
CTSB-210ENST00000526195 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
CTSB-210ENST00000526195 ZNF326Q5BKZ1 582 aaKnown RBP24.04■■□□□ 1.44
CTSB-210ENST00000526195 KCNA6P17658 529 aa24.02■■□□□ 1.44
CTSB-210ENST00000526195 ADAMTS13Q76LX8 1427 aa24.01■■□□□ 1.43
CTSB-210ENST00000526195 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
CTSB-210ENST00000526195 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
CTSB-210ENST00000526195 NEXMIFQ5QGS0 1516 aa23.96■■□□□ 1.43
CTSB-210ENST00000526195 KIF1BO60333 1816 aa23.96■■□□□ 1.43
CTSB-210ENST00000526195 TOM1O60784 492 aa23.95■■□□□ 1.42
CTSB-210ENST00000526195 RBM33Q96EV2 1170 aaKnown RBP23.95■■□□□ 1.42
CTSB-210ENST00000526195 NWD1Q149M9 1564 aa23.95■■□□□ 1.42
CTSB-210ENST00000526195 ALKQ9UM73 1620 aa23.94■■□□□ 1.42
CTSB-210ENST00000526195 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
CTSB-210ENST00000526195 TMEM94Q12767 1356 aa23.93■■□□□ 1.42
CTSB-210ENST00000526195 PIP4K2BP78356 416 aa23.93■■□□□ 1.42
CTSB-210ENST00000526195 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
CTSB-210ENST00000526195 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
CTSB-210ENST00000526195 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
CTSB-210ENST00000526195 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
CTSB-210ENST00000526195 NKTRP30414 1462 aaKnown RBP23.91■■□□□ 1.42
CTSB-210ENST00000526195 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
CTSB-210ENST00000526195 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
CTSB-210ENST00000526195 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.42
CTSB-210ENST00000526195 HRCP23327 699 aa23.88■■□□□ 1.41
CTSB-210ENST00000526195 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
CTSB-210ENST00000526195 RPGRIP1LQ68CZ1 1315 aa23.87■■□□□ 1.41
CTSB-210ENST00000526195 PTPRUQ92729 1446 aa23.87■■□□□ 1.41
CTSB-210ENST00000526195 SPATA31E1Q6ZUB1 1445 aa23.86■■□□□ 1.41
CTSB-210ENST00000526195 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
CTSB-210ENST00000526195 VGFO15240 615 aaPredicted RBP23.85■■□□□ 1.41
CTSB-210ENST00000526195 AMOTL2Q9Y2J4 779 aa23.85■■□□□ 1.41
CTSB-210ENST00000526195 METP08581 1390 aa23.85■■□□□ 1.41
CTSB-210ENST00000526195 PPLO60437 1756 aa23.8■■□□□ 1.4
CTSB-210ENST00000526195 HSPA1LP34931 641 aa23.8■■□□□ 1.4
CTSB-210ENST00000526195 ANKRD30BQ9BXX2 1392 aa23.79■■□□□ 1.4
CTSB-210ENST00000526195 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
CTSB-210ENST00000526195 MSH6P52701 1360 aa23.78■■□□□ 1.4
CTSB-210ENST00000526195 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
CTSB-210ENST00000526195 NCOA3Q9Y6Q9 1424 aa23.75■■□□□ 1.39
CTSB-210ENST00000526195 C14orf37Q86TY3 774 aa23.74■■□□□ 1.39
CTSB-210ENST00000526195 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
CTSB-210ENST00000526195 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
CTSB-210ENST00000526195 FAM135BQ49AJ0 1406 aa23.7■■□□□ 1.38
CTSB-210ENST00000526195 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
CTSB-210ENST00000526195 PIK3C2GO75747 1445 aa23.68■■□□□ 1.38
CTSB-210ENST00000526195 SLAIN2Q9P270 581 aa23.68■■□□□ 1.38
CTSB-210ENST00000526195 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
CTSB-210ENST00000526195 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.65■■□□□ 1.38
CTSB-210ENST00000526195 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
CTSB-210ENST00000526195 ATF3P18847 181 aa23.64■■□□□ 1.37
CTSB-210ENST00000526195 CADPS2Q86UW7 1296 aa23.64■■□□□ 1.37
CTSB-210ENST00000526195 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.37
CTSB-210ENST00000526195 MYOM2P54296 1465 aa23.63■■□□□ 1.37
CTSB-210ENST00000526195 NRXN1Q9ULB1 1477 aa23.63■■□□□ 1.37
CTSB-210ENST00000526195 PRAG1Q86YV5 1406 aa23.62■■□□□ 1.37
CTSB-210ENST00000526195 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
CTSB-210ENST00000526195 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
CTSB-210ENST00000526195 ADGRL3Q9HAR2 1447 aa23.6■■□□□ 1.37
CTSB-210ENST00000526195 DCCP43146 1447 aa23.59■■□□□ 1.37
CTSB-210ENST00000526195 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
CTSB-210ENST00000526195 C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
CTSB-210ENST00000526195 STK26Q9P289 416 aa23.59■■□□□ 1.37
CTSB-210ENST00000526195 DISP3Q9P2K9 1392 aa23.58■■□□□ 1.37
CTSB-210ENST00000526195 LRPPRCP42704 1394 aaKnown RBP23.57■■□□□ 1.36
CTSB-210ENST00000526195 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
CTSB-210ENST00000526195 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
CTSB-210ENST00000526195 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
CTSB-210ENST00000526195 NALCNQ8IZF0 1738 aa23.56■■□□□ 1.36
CTSB-210ENST00000526195 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
CTSB-210ENST00000526195 MST1RQ04912 1400 aa23.55■■□□□ 1.36
CTSB-210ENST00000526195 TECPR2O15040 1411 aa23.54■■□□□ 1.36
CTSB-210ENST00000526195 YTHDC2Q9H6S0 1430 aaKnown RBP23.54■■□□□ 1.36
CTSB-210ENST00000526195 ABCC11Q96J66 1382 aa23.53■■□□□ 1.36
CTSB-210ENST00000526195 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
CTSB-210ENST00000526195 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
CTSB-210ENST00000526195 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
CTSB-210ENST00000526195 LAMC1P11047 1609 aa23.49■■□□□ 1.35
CTSB-210ENST00000526195 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
CTSB-210ENST00000526195 STAC3Q96MF2 364 aa23.48■■□□□ 1.35
CTSB-210ENST00000526195 PHLPP1O60346 1717 aa23.47■■□□□ 1.35
CTSB-210ENST00000526195 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
CTSB-210ENST00000526195 ADGRB1O14514 1584 aa23.46■■□□□ 1.35
CTSB-210ENST00000526195 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
CTSB-210ENST00000526195 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
CTSB-210ENST00000526195 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
CTSB-210ENST00000526195 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
CTSB-210ENST00000526195 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms