RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
CTTN-210ENST00000525852 EID1Q9Y6B2 187 aa18.23■□□□□ 0.51
CTTN-210ENST00000525852 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
CTTN-210ENST00000525852 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
CTTN-210ENST00000525852 STRCP1A6NGW2 1772 aa18.18■□□□□ 0.5
CTTN-210ENST00000525852 NEXMIFQ5QGS0 1516 aa18.18■□□□□ 0.5
CTTN-210ENST00000525852 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
CTTN-210ENST00000525852 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
CTTN-210ENST00000525852 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
CTTN-210ENST00000525852 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
CTTN-210ENST00000525852 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
CTTN-210ENST00000525852 CERKQ8TCT0 537 aa18.14■□□□□ 0.5
CTTN-210ENST00000525852 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.5
CTTN-210ENST00000525852 SPATA31E1Q6ZUB1 1445 aa18.14■□□□□ 0.49
CTTN-210ENST00000525852 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
CTTN-210ENST00000525852 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
CTTN-210ENST00000525852 PPLO60437 1756 aa18.12■□□□□ 0.49
CTTN-210ENST00000525852 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
CTTN-210ENST00000525852 BCANQ96GW7 911 aa18.12■□□□□ 0.49
CTTN-210ENST00000525852 ADAMTS13Q76LX8 1427 aa18.11■□□□□ 0.49
CTTN-210ENST00000525852 CPS1P31327 1500 aa18.09■□□□□ 0.49
CTTN-210ENST00000525852 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
CTTN-210ENST00000525852 RGL3Q3MIN7 710 aa18.08■□□□□ 0.49
CTTN-210ENST00000525852 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
CTTN-210ENST00000525852 RPGRIP1LQ68CZ1 1315 aa18.07■□□□□ 0.48
CTTN-210ENST00000525852 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
CTTN-210ENST00000525852 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
CTTN-210ENST00000525852 CHD2O14647 1828 aaKnown RBP18.06■□□□□ 0.48
CTTN-210ENST00000525852 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
CTTN-210ENST00000525852 LRRC7Q96NW7 1537 aa18.05■□□□□ 0.48
CTTN-210ENST00000525852 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
CTTN-210ENST00000525852 XIRP1Q702N8 1843 aaKnown RBP18.04■□□□□ 0.48
CTTN-210ENST00000525852 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
CTTN-210ENST00000525852 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
CTTN-210ENST00000525852 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
CTTN-210ENST00000525852 KCNA6P17658 529 aa18.02■□□□□ 0.48
CTTN-210ENST00000525852 IQSEC2Q5JU85 1478 aa18.02■□□□□ 0.48
CTTN-210ENST00000525852 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.47
CTTN-210ENST00000525852 ILDR1Q86SU0 546 aaPredicted RBP18.01■□□□□ 0.47
CTTN-210ENST00000525852 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
CTTN-210ENST00000525852 METP08581 1390 aa18■□□□□ 0.47
CTTN-210ENST00000525852 FBXO41Q8TF61 875 aa18■□□□□ 0.47
CTTN-210ENST00000525852 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
CTTN-210ENST00000525852 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
CTTN-210ENST00000525852 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
CTTN-210ENST00000525852 XRN1Q8IZH2 1706 aaKnown RBP17.97■□□□□ 0.47
CTTN-210ENST00000525852 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
CTTN-210ENST00000525852 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
CTTN-210ENST00000525852 PIK3C2GO75747 1445 aa17.96■□□□□ 0.47
CTTN-210ENST00000525852 MYOM2P54296 1465 aa17.96■□□□□ 0.46
CTTN-210ENST00000525852 NRXN1Q9ULB1 1477 aa17.96■□□□□ 0.46
CTTN-210ENST00000525852 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
CTTN-210ENST00000525852 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
CTTN-210ENST00000525852 AMOTL2Q9Y2J4 779 aa17.94■□□□□ 0.46
CTTN-210ENST00000525852 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
CTTN-210ENST00000525852 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
CTTN-210ENST00000525852 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
CTTN-210ENST00000525852 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
CTTN-210ENST00000525852 NEUROD1Q13562 356 aa17.89■□□□□ 0.45
CTTN-210ENST00000525852 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
CTTN-210ENST00000525852 TMEM132EQ6IEE7 984 aa17.87■□□□□ 0.45
CTTN-210ENST00000525852 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
CTTN-210ENST00000525852 LAMC1P11047 1609 aa17.86■□□□□ 0.45
CTTN-210ENST00000525852 ROBO2Q9HCK4 1378 aa17.86■□□□□ 0.45
CTTN-210ENST00000525852 PRAG1Q86YV5 1406 aa17.85■□□□□ 0.45
CTTN-210ENST00000525852 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
CTTN-210ENST00000525852 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
CTTN-210ENST00000525852 TOM1O60784 492 aa17.84■□□□□ 0.45
CTTN-210ENST00000525852 PIP4K2BP78356 416 aa17.84■□□□□ 0.45
CTTN-210ENST00000525852 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
CTTN-210ENST00000525852 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
CTTN-210ENST00000525852 NALCNQ8IZF0 1738 aa17.83■□□□□ 0.45
CTTN-210ENST00000525852 ADGRB1O14514 1584 aa17.83■□□□□ 0.44
CTTN-210ENST00000525852 MSH6P52701 1360 aa17.83■□□□□ 0.44
CTTN-210ENST00000525852 KNDC1Q76NI1 1749 aa17.83■□□□□ 0.44
CTTN-210ENST00000525852 STK26Q9P289 416 aa17.82■□□□□ 0.44
CTTN-210ENST00000525852 YTHDC2Q9H6S0 1430 aaKnown RBP17.82■□□□□ 0.44
CTTN-210ENST00000525852 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
CTTN-210ENST00000525852 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
CTTN-210ENST00000525852 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
CTTN-210ENST00000525852 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
CTTN-210ENST00000525852 TECPR2O15040 1411 aa17.81■□□□□ 0.44
CTTN-210ENST00000525852 ADGRL3Q9HAR2 1447 aa17.79■□□□□ 0.44
CTTN-210ENST00000525852 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
CTTN-210ENST00000525852 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
CTTN-210ENST00000525852 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
CTTN-210ENST00000525852 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
CTTN-210ENST00000525852 KIAA1210Q9ULL0 1709 aa17.76■□□□□ 0.43
CTTN-210ENST00000525852 ROBO1Q9Y6N7 1651 aa17.76■□□□□ 0.43
CTTN-210ENST00000525852 DCCP43146 1447 aa17.74■□□□□ 0.43
CTTN-210ENST00000525852 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
CTTN-210ENST00000525852 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
CTTN-210ENST00000525852 ATF3P18847 181 aa17.73■□□□□ 0.43
CTTN-210ENST00000525852 HSPA1LP34931 641 aa17.73■□□□□ 0.43
CTTN-210ENST00000525852 NBPF1Q3BBV0 1214 aa17.73■□□□□ 0.43
CTTN-210ENST00000525852 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
CTTN-210ENST00000525852 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
CTTN-210ENST00000525852 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
CTTN-210ENST00000525852 MST1RQ04912 1400 aa17.72■□□□□ 0.43
CTTN-210ENST00000525852 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms