RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
LRRK1-204ENST00000525617 TRPM2O94759 1503 aa21.4■■□□□ 1.02
LRRK1-204ENST00000525617 CPS1P31327 1500 aa21.4■■□□□ 1.02
LRRK1-204ENST00000525617 ZFYVE9O95405 1425 aa21.39■■□□□ 1.02
LRRK1-204ENST00000525617 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.01
LRRK1-204ENST00000525617 RAB3GAP2Q9H2M9 1393 aa21.37■■□□□ 1.01
LRRK1-204ENST00000525617 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
LRRK1-204ENST00000525617 CLTCL1P53675 1640 aa21.36■■□□□ 1.01
LRRK1-204ENST00000525617 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
LRRK1-204ENST00000525617 KIF1BO60333 1816 aa21.35■■□□□ 1.01
LRRK1-204ENST00000525617 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
LRRK1-204ENST00000525617 FOXD1Q16676 465 aa21.34■■□□□ 1.01
LRRK1-204ENST00000525617 NUTM2DQ5VT03 806 aaPredicted RBP21.33■■□□□ 1.01
LRRK1-204ENST00000525617 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
LRRK1-204ENST00000525617 HRCP23327 699 aa21.3■■□□□ 1
LRRK1-204ENST00000525617 STRCP1A6NGW2 1772 aa21.29■■□□□ 1
LRRK1-204ENST00000525617 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
LRRK1-204ENST00000525617 UBAP1LF5GYI3 381 aa21.28■■□□□ 1
LRRK1-204ENST00000525617 KCNA6P17658 529 aa21.27■■□□□ 1
LRRK1-204ENST00000525617 TBX22Q9Y458 520 aa21.27■■□□□ 1
LRRK1-204ENST00000525617 LRRC7Q96NW7 1537 aa21.25■□□□□ 0.99
LRRK1-204ENST00000525617 TOM1O60784 492 aa21.24■□□□□ 0.99
LRRK1-204ENST00000525617 RPGRIP1LQ68CZ1 1315 aa21.24■□□□□ 0.99
LRRK1-204ENST00000525617 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
LRRK1-204ENST00000525617 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
LRRK1-204ENST00000525617 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
LRRK1-204ENST00000525617 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
LRRK1-204ENST00000525617 PROSER2Q86WR7 435 aaPredicted RBP21.21■□□□□ 0.99
LRRK1-204ENST00000525617 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
LRRK1-204ENST00000525617 CHD2O14647 1828 aaKnown RBP21.2■□□□□ 0.98
LRRK1-204ENST00000525617 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
LRRK1-204ENST00000525617 NWD1Q149M9 1564 aa21.19■□□□□ 0.98
LRRK1-204ENST00000525617 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
LRRK1-204ENST00000525617 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
LRRK1-204ENST00000525617 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
LRRK1-204ENST00000525617 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
LRRK1-204ENST00000525617 PIP4K2BP78356 416 aa21.15■□□□□ 0.98
LRRK1-204ENST00000525617 PPLO60437 1756 aa21.15■□□□□ 0.98
LRRK1-204ENST00000525617 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
LRRK1-204ENST00000525617 SPATA31E1Q6ZUB1 1445 aa21.14■□□□□ 0.98
LRRK1-204ENST00000525617 XIRP1Q702N8 1843 aaKnown RBP21.13■□□□□ 0.97
LRRK1-204ENST00000525617 AMOTL2Q9Y2J4 779 aa21.13■□□□□ 0.97
LRRK1-204ENST00000525617 ANKRD30BQ9BXX2 1392 aa21.12■□□□□ 0.97
LRRK1-204ENST00000525617 RBM33Q96EV2 1170 aaKnown RBP21.11■□□□□ 0.97
LRRK1-204ENST00000525617 METP08581 1390 aa21.09■□□□□ 0.97
LRRK1-204ENST00000525617 MSH6P52701 1360 aa21.09■□□□□ 0.97
LRRK1-204ENST00000525617 C14orf37Q86TY3 774 aa21.08■□□□□ 0.97
LRRK1-204ENST00000525617 PTPRUQ92729 1446 aa21.08■□□□□ 0.97
LRRK1-204ENST00000525617 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
LRRK1-204ENST00000525617 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
LRRK1-204ENST00000525617 ALKQ9UM73 1620 aa21.06■□□□□ 0.96
LRRK1-204ENST00000525617 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
LRRK1-204ENST00000525617 ADGRF5Q8IZF2 1346 aa21.05■□□□□ 0.96
LRRK1-204ENST00000525617 XRN1Q8IZH2 1706 aaKnown RBP21.04■□□□□ 0.96
LRRK1-204ENST00000525617 SETD1AO15047 1707 aaKnown RBP21.01■□□□□ 0.95
LRRK1-204ENST00000525617 C19orf44Q9H6X5 657 aa21.01■□□□□ 0.95
LRRK1-204ENST00000525617 HSPA1LP34931 641 aa20.99■□□□□ 0.95
LRRK1-204ENST00000525617 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
LRRK1-204ENST00000525617 ATF3P18847 181 aa20.98■□□□□ 0.95
LRRK1-204ENST00000525617 CADPS2Q86UW7 1296 aa20.98■□□□□ 0.95
LRRK1-204ENST00000525617 MYOM2P54296 1465 aa20.98■□□□□ 0.95
LRRK1-204ENST00000525617 STAC3Q96MF2 364 aa20.97■□□□□ 0.95
LRRK1-204ENST00000525617 SLAIN2Q9P270 581 aa20.97■□□□□ 0.95
LRRK1-204ENST00000525617 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
LRRK1-204ENST00000525617 DCAF11Q8TEB1 546 aa20.96■□□□□ 0.95
LRRK1-204ENST00000525617 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.95■□□□□ 0.94
LRRK1-204ENST00000525617 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
LRRK1-204ENST00000525617 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
LRRK1-204ENST00000525617 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
LRRK1-204ENST00000525617 C14orf93Q9H972 538 aaKnown RBP20.93■□□□□ 0.94
LRRK1-204ENST00000525617 DCCP43146 1447 aa20.93■□□□□ 0.94
LRRK1-204ENST00000525617 TMEM132EQ6IEE7 984 aa20.92■□□□□ 0.94
LRRK1-204ENST00000525617 STK26Q9P289 416 aa20.92■□□□□ 0.94
LRRK1-204ENST00000525617 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
LRRK1-204ENST00000525617 LAMC1P11047 1609 aa20.92■□□□□ 0.94
LRRK1-204ENST00000525617 CFAP70Q5T0N1 1121 aa20.91■□□□□ 0.94
LRRK1-204ENST00000525617 ROBO2Q9HCK4 1378 aa20.91■□□□□ 0.94
LRRK1-204ENST00000525617 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
LRRK1-204ENST00000525617 ADGRL3Q9HAR2 1447 aa20.9■□□□□ 0.94
LRRK1-204ENST00000525617 LRPPRCP42704 1394 aaKnown RBP20.9■□□□□ 0.94
LRRK1-204ENST00000525617 DHX57Q6P158 1386 aaKnown RBP20.89■□□□□ 0.93
LRRK1-204ENST00000525617 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
LRRK1-204ENST00000525617 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
LRRK1-204ENST00000525617 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
LRRK1-204ENST00000525617 TECPR2O15040 1411 aa20.87■□□□□ 0.93
LRRK1-204ENST00000525617 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
LRRK1-204ENST00000525617 KNDC1Q76NI1 1749 aa20.85■□□□□ 0.93
LRRK1-204ENST00000525617 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
LRRK1-204ENST00000525617 SIRT1Q96EB6 747 aa20.82■□□□□ 0.92
LRRK1-204ENST00000525617 MST1RQ04912 1400 aa20.81■□□□□ 0.92
LRRK1-204ENST00000525617 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
LRRK1-204ENST00000525617 SIN3AQ96ST3 1273 aa20.8■□□□□ 0.92
LRRK1-204ENST00000525617 PHLPP1O60346 1717 aa20.8■□□□□ 0.92
LRRK1-204ENST00000525617 BRINP3Q76B58 766 aa20.79■□□□□ 0.92
LRRK1-204ENST00000525617 DISP3Q9P2K9 1392 aa20.79■□□□□ 0.92
LRRK1-204ENST00000525617 ADGRB1O14514 1584 aa20.77■□□□□ 0.92
LRRK1-204ENST00000525617 POGKQ9P215 609 aa20.77■□□□□ 0.92
LRRK1-204ENST00000525617 PLEKHH1Q9ULM0 1364 aa20.76■□□□□ 0.91
LRRK1-204ENST00000525617 TRAK1Q9UPV9 953 aa20.76■□□□□ 0.91
LRRK1-204ENST00000525617 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms