RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 CLTCL1P53675 1640 aa27.7■■■□□ 2.02
TSPAN4-215ENST00000525334 PLEKHG1Q9ULL1 1385 aa27.67■■■□□ 2.02
TSPAN4-215ENST00000525334 SETD5Q9C0A6 1442 aa27.67■■■□□ 2.02
TSPAN4-215ENST00000525334 PPP1R15AO75807 674 aaPredicted RBP27.66■■■□□ 2.02
TSPAN4-215ENST00000525334 HDGFP51858 240 aaKnown RBP27.66■■■□□ 2.02
TSPAN4-215ENST00000525334 SLC26A8Q96RN1 970 aa27.66■■■□□ 2.02
TSPAN4-215ENST00000525334 LRRC7Q96NW7 1537 aa27.64■■■□□ 2.02
TSPAN4-215ENST00000525334 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.64■■■□□ 2.02
TSPAN4-215ENST00000525334 BCANQ96GW7 911 aa27.63■■■□□ 2.01
TSPAN4-215ENST00000525334 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
TSPAN4-215ENST00000525334 TOM1O60784 492 aa27.62■■■□□ 2.01
TSPAN4-215ENST00000525334 NUTM2DQ5VT03 806 aaPredicted RBP27.62■■■□□ 2.01
TSPAN4-215ENST00000525334 FOXD1Q16676 465 aa27.59■■■□□ 2.01
TSPAN4-215ENST00000525334 KIF1BO60333 1816 aa27.59■■■□□ 2.01
TSPAN4-215ENST00000525334 MPHOSPH9Q99550 1183 aa27.58■■■□□ 2.01
TSPAN4-215ENST00000525334 RAB3GAP2Q9H2M9 1393 aa27.58■■■□□ 2.01
TSPAN4-215ENST00000525334 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
TSPAN4-215ENST00000525334 KCNA6P17658 529 aa27.56■■■□□ 2
TSPAN4-215ENST00000525334 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
TSPAN4-215ENST00000525334 NWD1Q149M9 1564 aa27.56■■■□□ 2
TSPAN4-215ENST00000525334 ADAMTS13Q76LX8 1427 aa27.54■■■□□ 2
TSPAN4-215ENST00000525334 NEXMIFQ5QGS0 1516 aa27.53■■■□□ 2
TSPAN4-215ENST00000525334 DIP2AQ14689 1571 aa27.52■■■□□ 2
TSPAN4-215ENST00000525334 PIP4K2BP78356 416 aa27.52■■■□□ 2
TSPAN4-215ENST00000525334 XIRP1Q702N8 1843 aaKnown RBP27.52■■■□□ 2
TSPAN4-215ENST00000525334 TBX22Q9Y458 520 aa27.51■■□□□ 1.99
TSPAN4-215ENST00000525334 NKTRP30414 1462 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-215ENST00000525334 ALKQ9UM73 1620 aa27.49■■□□□ 1.99
TSPAN4-215ENST00000525334 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
TSPAN4-215ENST00000525334 SCAF1Q9H7N4 1312 aaKnown RBP27.49■■□□□ 1.99
TSPAN4-215ENST00000525334 CHD2O14647 1828 aaKnown RBP27.49■■□□□ 1.99
TSPAN4-215ENST00000525334 SETBP1Q9Y6X0 1596 aa27.48■■□□□ 1.99
TSPAN4-215ENST00000525334 CCDC144AA2RUR9 1427 aa27.47■■□□□ 1.99
TSPAN4-215ENST00000525334 TMEM94Q12767 1356 aa27.47■■□□□ 1.99
TSPAN4-215ENST00000525334 PROSER2Q86WR7 435 aaPredicted RBP27.45■■□□□ 1.98
TSPAN4-215ENST00000525334 HSPA1LP34931 641 aa27.43■■□□□ 1.98
TSPAN4-215ENST00000525334 PIK3R4Q99570 1358 aa27.43■■□□□ 1.98
TSPAN4-215ENST00000525334 RBM33Q96EV2 1170 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-215ENST00000525334 PPLO60437 1756 aa27.4■■□□□ 1.98
TSPAN4-215ENST00000525334 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
TSPAN4-215ENST00000525334 HRCP23327 699 aa27.38■■□□□ 1.97
TSPAN4-215ENST00000525334 SPATA31E1Q6ZUB1 1445 aa27.38■■□□□ 1.97
TSPAN4-215ENST00000525334 PTPRUQ92729 1446 aa27.38■■□□□ 1.97
TSPAN4-215ENST00000525334 VGFO15240 615 aaPredicted RBP27.36■■□□□ 1.97
TSPAN4-215ENST00000525334 METP08581 1390 aa27.35■■□□□ 1.97
TSPAN4-215ENST00000525334 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
TSPAN4-215ENST00000525334 AMOTL2Q9Y2J4 779 aa27.33■■□□□ 1.97
TSPAN4-215ENST00000525334 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
TSPAN4-215ENST00000525334 DISP3Q9P2K9 1392 aa27.32■■□□□ 1.96
TSPAN4-215ENST00000525334 IFT172Q9UG01 1749 aa27.31■■□□□ 1.96
TSPAN4-215ENST00000525334 SETD1AO15047 1707 aaKnown RBP27.3■■□□□ 1.96
TSPAN4-215ENST00000525334 MSH6P52701 1360 aa27.3■■□□□ 1.96
TSPAN4-215ENST00000525334 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
TSPAN4-215ENST00000525334 ANKRD30BQ9BXX2 1392 aa27.27■■□□□ 1.96
TSPAN4-215ENST00000525334 ADGRF5Q8IZF2 1346 aa27.25■■□□□ 1.95
TSPAN4-215ENST00000525334 FAM135BQ49AJ0 1406 aa27.24■■□□□ 1.95
TSPAN4-215ENST00000525334 C14orf37Q86TY3 774 aa27.23■■□□□ 1.95
TSPAN4-215ENST00000525334 SLAIN2Q9P270 581 aa27.21■■□□□ 1.95
TSPAN4-215ENST00000525334 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.2■■□□□ 1.94
TSPAN4-215ENST00000525334 C19orf44Q9H6X5 657 aa27.19■■□□□ 1.94
TSPAN4-215ENST00000525334 ROBO1Q9Y6N7 1651 aa27.19■■□□□ 1.94
TSPAN4-215ENST00000525334 PIK3C2GO75747 1445 aa27.18■■□□□ 1.94
TSPAN4-215ENST00000525334 PTCH1Q13635 1447 aa27.16■■□□□ 1.94
TSPAN4-215ENST00000525334 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
TSPAN4-215ENST00000525334 MYOM2P54296 1465 aa27.15■■□□□ 1.94
TSPAN4-215ENST00000525334 ILDR2Q71H61 639 aa27.14■■□□□ 1.94
TSPAN4-215ENST00000525334 NRXN1Q9ULB1 1477 aa27.13■■□□□ 1.93
TSPAN4-215ENST00000525334 CADPS2Q86UW7 1296 aa27.13■■□□□ 1.93
TSPAN4-215ENST00000525334 ROBO2Q9HCK4 1378 aa27.12■■□□□ 1.93
TSPAN4-215ENST00000525334 ASXL1Q8IXJ9 1541 aa27.12■■□□□ 1.93
TSPAN4-215ENST00000525334 ATF3P18847 181 aa27.12■■□□□ 1.93
TSPAN4-215ENST00000525334 DCCP43146 1447 aa27.12■■□□□ 1.93
TSPAN4-215ENST00000525334 NALCNQ8IZF0 1738 aa27.12■■□□□ 1.93
TSPAN4-215ENST00000525334 ADGRL3Q9HAR2 1447 aa27.11■■□□□ 1.93
TSPAN4-215ENST00000525334 LAMC1P11047 1609 aa27.06■■□□□ 1.92
TSPAN4-215ENST00000525334 TMEM132EQ6IEE7 984 aa27.05■■□□□ 1.92
TSPAN4-215ENST00000525334 LRPPRCP42704 1394 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-215ENST00000525334 C14orf93Q9H972 538 aaKnown RBP27.04■■□□□ 1.92
TSPAN4-215ENST00000525334 TECPR2O15040 1411 aa27.04■■□□□ 1.92
TSPAN4-215ENST00000525334 MED1Q15648 1581 aaPredicted RBP27.04■■□□□ 1.92
TSPAN4-215ENST00000525334 MST1RQ04912 1400 aa27.03■■□□□ 1.92
TSPAN4-215ENST00000525334 KNDC1Q76NI1 1749 aa27.03■■□□□ 1.92
TSPAN4-215ENST00000525334 STK26Q9P289 416 aa27.03■■□□□ 1.92
TSPAN4-215ENST00000525334 CFAP70Q5T0N1 1121 aa27.02■■□□□ 1.92
TSPAN4-215ENST00000525334 PHLPP1O60346 1717 aa27.02■■□□□ 1.92
TSPAN4-215ENST00000525334 YTHDC2Q9H6S0 1430 aaKnown RBP27.01■■□□□ 1.91
TSPAN4-215ENST00000525334 DHX57Q6P158 1386 aaKnown RBP27.01■■□□□ 1.91
TSPAN4-215ENST00000525334 DCAF11Q8TEB1 546 aa27.01■■□□□ 1.91
TSPAN4-215ENST00000525334 ABCC11Q96J66 1382 aa27■■□□□ 1.91
TSPAN4-215ENST00000525334 KDM2AQ9Y2K7 1162 aa26.99■■□□□ 1.91
TSPAN4-215ENST00000525334 SOCS7O14512 581 aa26.98■■□□□ 1.91
TSPAN4-215ENST00000525334 BRINP3Q76B58 766 aa26.97■■□□□ 1.91
TSPAN4-215ENST00000525334 AHDC1Q5TGY3 1603 aaPredicted RBP26.97■■□□□ 1.91
TSPAN4-215ENST00000525334 TRIM26Q12899 539 aaPredicted RBP26.96■■□□□ 1.91
TSPAN4-215ENST00000525334 COL16A1Q07092 1604 aaPredicted RBP26.96■■□□□ 1.91
TSPAN4-215ENST00000525334 WAPLQ7Z5K2 1190 aa26.95■■□□□ 1.9
TSPAN4-215ENST00000525334 STAC3Q96MF2 364 aa26.94■■□□□ 1.9
TSPAN4-215ENST00000525334 PHF23Q9BUL5 403 aaPredicted RBP26.94■■□□□ 1.9
TSPAN4-215ENST00000525334 PLEKHH1Q9ULM0 1364 aa26.94■■□□□ 1.9
TSPAN4-215ENST00000525334 ADGRB1O14514 1584 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 338 ms