RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RIMS2Q9UQ26 1411 aa19.27■□□□□ 0.68
TRAPPC4-205ENST00000525079 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC4-205ENST00000525079 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
TRAPPC4-205ENST00000525079 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-205ENST00000525079 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
TRAPPC4-205ENST00000525079 LRRC7Q96NW7 1537 aa19.21■□□□□ 0.67
TRAPPC4-205ENST00000525079 FOXD1Q16676 465 aa19.21■□□□□ 0.67
TRAPPC4-205ENST00000525079 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRAPPC4-205ENST00000525079 ZNF326Q5BKZ1 582 aaKnown RBP19.2■□□□□ 0.66
TRAPPC4-205ENST00000525079 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
TRAPPC4-205ENST00000525079 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
TRAPPC4-205ENST00000525079 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
TRAPPC4-205ENST00000525079 TRPM2O94759 1503 aa19.19■□□□□ 0.66
TRAPPC4-205ENST00000525079 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
TRAPPC4-205ENST00000525079 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
TRAPPC4-205ENST00000525079 KCNA6P17658 529 aa19.17■□□□□ 0.66
TRAPPC4-205ENST00000525079 TOM1O60784 492 aa19.16■□□□□ 0.66
TRAPPC4-205ENST00000525079 RBM33Q96EV2 1170 aaKnown RBP19.16■□□□□ 0.66
TRAPPC4-205ENST00000525079 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
TRAPPC4-205ENST00000525079 PROSER2Q86WR7 435 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC4-205ENST00000525079 KIF1BO60333 1816 aa19.14■□□□□ 0.65
TRAPPC4-205ENST00000525079 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
TRAPPC4-205ENST00000525079 XIRP1Q702N8 1843 aaKnown RBP19.13■□□□□ 0.65
TRAPPC4-205ENST00000525079 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
TRAPPC4-205ENST00000525079 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
TRAPPC4-205ENST00000525079 ALKQ9UM73 1620 aa19.11■□□□□ 0.65
TRAPPC4-205ENST00000525079 TMEM94Q12767 1356 aa19.1■□□□□ 0.65
TRAPPC4-205ENST00000525079 CHD2O14647 1828 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-205ENST00000525079 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
TRAPPC4-205ENST00000525079 NEXMIFQ5QGS0 1516 aa19.08■□□□□ 0.64
TRAPPC4-205ENST00000525079 HSPA1LP34931 641 aa19.06■□□□□ 0.64
TRAPPC4-205ENST00000525079 DIP2AQ14689 1571 aa19.06■□□□□ 0.64
TRAPPC4-205ENST00000525079 NKTRP30414 1462 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-205ENST00000525079 NRXN3Q9Y4C0 1643 aa19.05■□□□□ 0.64
TRAPPC4-205ENST00000525079 CCDC144AA2RUR9 1427 aa19.04■□□□□ 0.64
TRAPPC4-205ENST00000525079 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
TRAPPC4-205ENST00000525079 SETBP1Q9Y6X0 1596 aa19.03■□□□□ 0.64
TRAPPC4-205ENST00000525079 PTPRUQ92729 1446 aa19.03■□□□□ 0.64
TRAPPC4-205ENST00000525079 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
TRAPPC4-205ENST00000525079 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
TRAPPC4-205ENST00000525079 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC4-205ENST00000525079 METP08581 1390 aa19.01■□□□□ 0.63
TRAPPC4-205ENST00000525079 PIK3R4Q99570 1358 aa19.01■□□□□ 0.63
TRAPPC4-205ENST00000525079 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
TRAPPC4-205ENST00000525079 C14orf37Q86TY3 774 aa19■□□□□ 0.63
TRAPPC4-205ENST00000525079 PPLO60437 1756 aa18.98■□□□□ 0.63
TRAPPC4-205ENST00000525079 MSH6P52701 1360 aa18.98■□□□□ 0.63
TRAPPC4-205ENST00000525079 SPATA31E1Q6ZUB1 1445 aa18.97■□□□□ 0.63
TRAPPC4-205ENST00000525079 ADGRF5Q8IZF2 1346 aa18.95■□□□□ 0.62
TRAPPC4-205ENST00000525079 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
TRAPPC4-205ENST00000525079 HRCP23327 699 aa18.94■□□□□ 0.62
TRAPPC4-205ENST00000525079 DISP3Q9P2K9 1392 aa18.93■□□□□ 0.62
TRAPPC4-205ENST00000525079 SLAIN2Q9P270 581 aa18.92■□□□□ 0.62
TRAPPC4-205ENST00000525079 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
TRAPPC4-205ENST00000525079 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
TRAPPC4-205ENST00000525079 C19orf44Q9H6X5 657 aa18.91■□□□□ 0.62
TRAPPC4-205ENST00000525079 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC4-205ENST00000525079 IFT172Q9UG01 1749 aa18.91■□□□□ 0.62
TRAPPC4-205ENST00000525079 FAM135BQ49AJ0 1406 aa18.91■□□□□ 0.62
TRAPPC4-205ENST00000525079 ROBO1Q9Y6N7 1651 aa18.9■□□□□ 0.62
TRAPPC4-205ENST00000525079 ANKRD30BQ9BXX2 1392 aa18.9■□□□□ 0.62
TRAPPC4-205ENST00000525079 ATF3P18847 181 aa18.89■□□□□ 0.61
TRAPPC4-205ENST00000525079 CADPS2Q86UW7 1296 aa18.87■□□□□ 0.61
TRAPPC4-205ENST00000525079 ROBO2Q9HCK4 1378 aa18.84■□□□□ 0.61
TRAPPC4-205ENST00000525079 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
TRAPPC4-205ENST00000525079 STK26Q9P289 416 aa18.84■□□□□ 0.61
TRAPPC4-205ENST00000525079 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
TRAPPC4-205ENST00000525079 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
TRAPPC4-205ENST00000525079 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC4-205ENST00000525079 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
TRAPPC4-205ENST00000525079 ADGRL3Q9HAR2 1447 aa18.81■□□□□ 0.6
TRAPPC4-205ENST00000525079 CFAP70Q5T0N1 1121 aa18.8■□□□□ 0.6
TRAPPC4-205ENST00000525079 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
TRAPPC4-205ENST00000525079 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
TRAPPC4-205ENST00000525079 ILDR2Q71H61 639 aa18.79■□□□□ 0.6
TRAPPC4-205ENST00000525079 DCCP43146 1447 aa18.79■□□□□ 0.6
TRAPPC4-205ENST00000525079 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
TRAPPC4-205ENST00000525079 BRINP3Q76B58 766 aa18.78■□□□□ 0.6
TRAPPC4-205ENST00000525079 DCAF11Q8TEB1 546 aa18.78■□□□□ 0.6
TRAPPC4-205ENST00000525079 C14orf93Q9H972 538 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-205ENST00000525079 MYOM2P54296 1465 aa18.77■□□□□ 0.6
TRAPPC4-205ENST00000525079 MST1RQ04912 1400 aa18.77■□□□□ 0.6
TRAPPC4-205ENST00000525079 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
TRAPPC4-205ENST00000525079 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-205ENST00000525079 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.59
TRAPPC4-205ENST00000525079 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
TRAPPC4-205ENST00000525079 YTHDC2Q9H6S0 1430 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-205ENST00000525079 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
TRAPPC4-205ENST00000525079 ABCC11Q96J66 1382 aa18.73■□□□□ 0.59
TRAPPC4-205ENST00000525079 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
TRAPPC4-205ENST00000525079 COL16A1Q07092 1604 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-205ENST00000525079 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-205ENST00000525079 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-205ENST00000525079 TECPR2O15040 1411 aa18.71■□□□□ 0.59
TRAPPC4-205ENST00000525079 KNDC1Q76NI1 1749 aa18.71■□□□□ 0.59
TRAPPC4-205ENST00000525079 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
TRAPPC4-205ENST00000525079 LAMC1P11047 1609 aa18.71■□□□□ 0.58
TRAPPC4-205ENST00000525079 AHDC1Q5TGY3 1603 aaPredicted RBP18.71■□□□□ 0.58
TRAPPC4-205ENST00000525079 ORAI2Q96SN7 254 aa18.7■□□□□ 0.58
TRAPPC4-205ENST00000525079 JCADQ9P266 1359 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms