RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 TOM1O60784 492 aa29.75■■■□□ 2.35
NDUFS3-202ENST00000524568 DISP3Q9P2K9 1392 aa29.75■■■□□ 2.35
NDUFS3-202ENST00000524568 NAIPQ13075 1403 aa29.74■■■□□ 2.35
NDUFS3-202ENST00000524568 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
NDUFS3-202ENST00000524568 HSPA1LP34931 641 aa29.72■■■□□ 2.35
NDUFS3-202ENST00000524568 NWD1Q149M9 1564 aa29.7■■■□□ 2.35
NDUFS3-202ENST00000524568 CHGAP10645 457 aaKnown RBP29.69■■■□□ 2.34
NDUFS3-202ENST00000524568 NUTM2DQ5VT03 806 aaPredicted RBP29.67■■■□□ 2.34
NDUFS3-202ENST00000524568 CHD2O14647 1828 aaKnown RBP29.66■■■□□ 2.34
NDUFS3-202ENST00000524568 PLEKHG1Q9ULL1 1385 aa29.66■■■□□ 2.34
NDUFS3-202ENST00000524568 RBM33Q96EV2 1170 aaKnown RBP29.65■■■□□ 2.34
NDUFS3-202ENST00000524568 ILDR2Q71H61 639 aa29.64■■■□□ 2.34
NDUFS3-202ENST00000524568 KCNA6P17658 529 aa29.63■■■□□ 2.33
NDUFS3-202ENST00000524568 BCANQ96GW7 911 aa29.63■■■□□ 2.33
NDUFS3-202ENST00000524568 CLTCL1P53675 1640 aa29.63■■■□□ 2.33
NDUFS3-202ENST00000524568 TMEM94Q12767 1356 aa29.63■■■□□ 2.33
NDUFS3-202ENST00000524568 PPP1R15AO75807 674 aaPredicted RBP29.61■■■□□ 2.33
NDUFS3-202ENST00000524568 HFM1A2PYH4 1435 aa29.61■■■□□ 2.33
NDUFS3-202ENST00000524568 ADAMTS13Q76LX8 1427 aa29.6■■■□□ 2.33
NDUFS3-202ENST00000524568 NKTRP30414 1462 aaKnown RBP29.59■■■□□ 2.33
NDUFS3-202ENST00000524568 NRXN3Q9Y4C0 1643 aa29.56■■■□□ 2.32
NDUFS3-202ENST00000524568 TRPM2O94759 1503 aa29.55■■■□□ 2.32
NDUFS3-202ENST00000524568 MED1Q15648 1581 aaPredicted RBP29.55■■■□□ 2.32
NDUFS3-202ENST00000524568 PROSER2Q86WR7 435 aaPredicted RBP29.54■■■□□ 2.32
NDUFS3-202ENST00000524568 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.52■■■□□ 2.32
NDUFS3-202ENST00000524568 DIP2AQ14689 1571 aa29.52■■■□□ 2.32
NDUFS3-202ENST00000524568 KIF1BO60333 1816 aa29.51■■■□□ 2.31
NDUFS3-202ENST00000524568 HDGFP51858 240 aaKnown RBP29.5■■■□□ 2.31
NDUFS3-202ENST00000524568 TBX22Q9Y458 520 aa29.49■■■□□ 2.31
NDUFS3-202ENST00000524568 ROBO1Q9Y6N7 1651 aa29.48■■■□□ 2.31
NDUFS3-202ENST00000524568 NEXMIFQ5QGS0 1516 aa29.48■■■□□ 2.31
NDUFS3-202ENST00000524568 TRIM52Q96A61 297 aa29.47■■■□□ 2.31
NDUFS3-202ENST00000524568 PTPRUQ92729 1446 aa29.45■■■□□ 2.31
NDUFS3-202ENST00000524568 SETBP1Q9Y6X0 1596 aa29.45■■■□□ 2.31
NDUFS3-202ENST00000524568 XRN1Q8IZH2 1706 aaKnown RBP29.42■■■□□ 2.3
NDUFS3-202ENST00000524568 ZNF326Q5BKZ1 582 aaKnown RBP29.41■■■□□ 2.3
NDUFS3-202ENST00000524568 FAM135BQ49AJ0 1406 aa29.4■■■□□ 2.3
NDUFS3-202ENST00000524568 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.39■■■□□ 2.3
NDUFS3-202ENST00000524568 MSH6P52701 1360 aa29.39■■■□□ 2.29
NDUFS3-202ENST00000524568 FOXD1Q16676 465 aa29.38■■■□□ 2.29
NDUFS3-202ENST00000524568 SLC4A1APQ9BWU0 796 aaKnown RBP29.38■■■□□ 2.29
NDUFS3-202ENST00000524568 PIK3R4Q99570 1358 aa29.37■■■□□ 2.29
NDUFS3-202ENST00000524568 SETD1AO15047 1707 aaKnown RBP29.34■■■□□ 2.29
NDUFS3-202ENST00000524568 METP08581 1390 aa29.34■■■□□ 2.29
NDUFS3-202ENST00000524568 PPLO60437 1756 aa29.34■■■□□ 2.29
NDUFS3-202ENST00000524568 AMOTL2Q9Y2J4 779 aa29.33■■■□□ 2.29
NDUFS3-202ENST00000524568 PHLPP1O60346 1717 aa29.3■■■□□ 2.28
NDUFS3-202ENST00000524568 NCOA3Q9Y6Q9 1424 aa29.28■■■□□ 2.28
NDUFS3-202ENST00000524568 SLAIN2Q9P270 581 aa29.28■■■□□ 2.28
NDUFS3-202ENST00000524568 C14orf37Q86TY3 774 aa29.26■■■□□ 2.27
NDUFS3-202ENST00000524568 SOCS7O14512 581 aa29.25■■■□□ 2.27
NDUFS3-202ENST00000524568 NALCNQ8IZF0 1738 aa29.23■■■□□ 2.27
NDUFS3-202ENST00000524568 COL16A1Q07092 1604 aaPredicted RBP29.23■■■□□ 2.27
NDUFS3-202ENST00000524568 MPHOSPH9Q99550 1183 aa29.22■■■□□ 2.27
NDUFS3-202ENST00000524568 IFT172Q9UG01 1749 aa29.22■■■□□ 2.27
NDUFS3-202ENST00000524568 C19orf44Q9H6X5 657 aa29.2■■■□□ 2.26
NDUFS3-202ENST00000524568 SETD5Q9C0A6 1442 aa29.18■■■□□ 2.26
NDUFS3-202ENST00000524568 PHF23Q9BUL5 403 aaPredicted RBP29.17■■■□□ 2.26
NDUFS3-202ENST00000524568 SPATA31E1Q6ZUB1 1445 aa29.17■■■□□ 2.26
NDUFS3-202ENST00000524568 CCDC144AA2RUR9 1427 aa29.16■■■□□ 2.26
NDUFS3-202ENST00000524568 CADPS2Q86UW7 1296 aa29.15■■■□□ 2.26
NDUFS3-202ENST00000524568 AHDC1Q5TGY3 1603 aaPredicted RBP29.14■■■□□ 2.26
NDUFS3-202ENST00000524568 ATF3P18847 181 aa29.14■■■□□ 2.26
NDUFS3-202ENST00000524568 VGFO15240 615 aaPredicted RBP29.13■■■□□ 2.25
NDUFS3-202ENST00000524568 RGS17Q9UGC6 210 aaPredicted RBP29.13■■■□□ 2.25
NDUFS3-202ENST00000524568 RPGRIP1LQ68CZ1 1315 aa29.13■■■□□ 2.25
NDUFS3-202ENST00000524568 DCCP43146 1447 aa29.12■■■□□ 2.25
NDUFS3-202ENST00000524568 RAB3GAP2Q9H2M9 1393 aa29.12■■■□□ 2.25
NDUFS3-202ENST00000524568 MST1RQ04912 1400 aa29.11■■■□□ 2.25
NDUFS3-202ENST00000524568 ADGRL3Q9HAR2 1447 aa29.11■■■□□ 2.25
NDUFS3-202ENST00000524568 ROBO2Q9HCK4 1378 aa29.11■■■□□ 2.25
NDUFS3-202ENST00000524568 ADGRF5Q8IZF2 1346 aa29.1■■■□□ 2.25
NDUFS3-202ENST00000524568 RGL3Q3MIN7 710 aa29.09■■■□□ 2.25
NDUFS3-202ENST00000524568 ASXL1Q8IXJ9 1541 aa29.09■■■□□ 2.25
NDUFS3-202ENST00000524568 BRINP3Q76B58 766 aa29.08■■■□□ 2.25
NDUFS3-202ENST00000524568 PTCH1Q13635 1447 aa29.08■■■□□ 2.25
NDUFS3-202ENST00000524568 NHSL1Q5SYE7 1610 aa29.06■■■□□ 2.24
NDUFS3-202ENST00000524568 PRAG1Q86YV5 1406 aa29.04■■■□□ 2.24
NDUFS3-202ENST00000524568 JCADQ9P266 1359 aa29.04■■■□□ 2.24
NDUFS3-202ENST00000524568 SHPRHQ149N8 1683 aa29.04■■■□□ 2.24
NDUFS3-202ENST00000524568 LRP6O75581 1613 aa29.03■■■□□ 2.24
NDUFS3-202ENST00000524568 PIK3C2GO75747 1445 aa28.98■■■□□ 2.23
NDUFS3-202ENST00000524568 DDX17Q92841 729 aaKnown RBP28.98■■■□□ 2.23
NDUFS3-202ENST00000524568 ANKRD30BQ9BXX2 1392 aa28.97■■■□□ 2.23
NDUFS3-202ENST00000524568 KNDC1Q76NI1 1749 aa28.96■■■□□ 2.23
NDUFS3-202ENST00000524568 POTEAQ6S8J7 498 aa28.95■■■□□ 2.22
NDUFS3-202ENST00000524568 C1orf167Q5SNV9 1468 aa28.95■■■□□ 2.22
NDUFS3-202ENST00000524568 TMEM132EQ6IEE7 984 aa28.92■■■□□ 2.22
NDUFS3-202ENST00000524568 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
NDUFS3-202ENST00000524568 TECPR2O15040 1411 aa28.9■■■□□ 2.22
NDUFS3-202ENST00000524568 STK26Q9P289 416 aa28.9■■■□□ 2.22
NDUFS3-202ENST00000524568 LAMC1P11047 1609 aa28.9■■■□□ 2.22
NDUFS3-202ENST00000524568 CDC42BPGQ6DT37 1551 aa28.89■■■□□ 2.22
NDUFS3-202ENST00000524568 LRPPRCP42704 1394 aaKnown RBP28.88■■■□□ 2.21
NDUFS3-202ENST00000524568 PLEKHH1Q9ULM0 1364 aa28.88■■■□□ 2.21
NDUFS3-202ENST00000524568 MYOM2P54296 1465 aa28.88■■■□□ 2.21
NDUFS3-202ENST00000524568 ACIN1Q9UKV3 1341 aaKnown RBP28.88■■■□□ 2.21
NDUFS3-202ENST00000524568 ORAI2Q96SN7 254 aa28.87■■■□□ 2.21
NDUFS3-202ENST00000524568 SPATA31A6Q5VVP1 1343 aa28.87■■■□□ 2.21
NDUFS3-202ENST00000524568 WAPLQ7Z5K2 1190 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms