RNA–Protein interactions for RNA: ENST00000524347.2

SGCD-204, Transcript of sarcoglycan delta, humanhuman

TSL 5

Gene SGCD, Length 739 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-204ENST00000524347 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
SGCD-204ENST00000524347 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
SGCD-204ENST00000524347 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
SGCD-204ENST00000524347 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
SGCD-204ENST00000524347 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
SGCD-204ENST00000524347 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
SGCD-204ENST00000524347 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
SGCD-204ENST00000524347 XIRP1Q702N8 1843 aaKnown RBP18.89■□□□□ 0.61
SGCD-204ENST00000524347 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
SGCD-204ENST00000524347 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
SGCD-204ENST00000524347 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
SGCD-204ENST00000524347 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
SGCD-204ENST00000524347 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
SGCD-204ENST00000524347 RIMS2Q9UQ26 1411 aa18.87■□□□□ 0.61
SGCD-204ENST00000524347 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
SGCD-204ENST00000524347 TRPM2O94759 1503 aa18.85■□□□□ 0.61
SGCD-204ENST00000524347 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
SGCD-204ENST00000524347 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
SGCD-204ENST00000524347 CLTCL1P53675 1640 aa18.84■□□□□ 0.61
SGCD-204ENST00000524347 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
SGCD-204ENST00000524347 RBM33Q96EV2 1170 aaKnown RBP18.82■□□□□ 0.6
SGCD-204ENST00000524347 BCANQ96GW7 911 aa18.8■□□□□ 0.6
SGCD-204ENST00000524347 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
SGCD-204ENST00000524347 PPP1R15AO75807 674 aaPredicted RBP18.79■□□□□ 0.6
SGCD-204ENST00000524347 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
SGCD-204ENST00000524347 TOM1O60784 492 aa18.77■□□□□ 0.6
SGCD-204ENST00000524347 FOXD1Q16676 465 aa18.77■□□□□ 0.6
SGCD-204ENST00000524347 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
SGCD-204ENST00000524347 HSPA1LP34931 641 aa18.76■□□□□ 0.59
SGCD-204ENST00000524347 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
SGCD-204ENST00000524347 TMEM94Q12767 1356 aa18.76■□□□□ 0.59
SGCD-204ENST00000524347 CHD2O14647 1828 aaKnown RBP18.76■□□□□ 0.59
SGCD-204ENST00000524347 NRXN3Q9Y4C0 1643 aa18.75■□□□□ 0.59
SGCD-204ENST00000524347 KCNA6P17658 529 aa18.75■□□□□ 0.59
SGCD-204ENST00000524347 ILDR2Q71H61 639 aa18.74■□□□□ 0.59
SGCD-204ENST00000524347 KIF1BO60333 1816 aa18.72■□□□□ 0.59
SGCD-204ENST00000524347 NEXMIFQ5QGS0 1516 aa18.72■□□□□ 0.59
SGCD-204ENST00000524347 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
SGCD-204ENST00000524347 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
SGCD-204ENST00000524347 DISP3Q9P2K9 1392 aa18.7■□□□□ 0.58
SGCD-204ENST00000524347 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
SGCD-204ENST00000524347 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
SGCD-204ENST00000524347 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.7■□□□□ 0.58
SGCD-204ENST00000524347 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
SGCD-204ENST00000524347 DIP2AQ14689 1571 aa18.68■□□□□ 0.58
SGCD-204ENST00000524347 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
SGCD-204ENST00000524347 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
SGCD-204ENST00000524347 HDGFP51858 240 aaKnown RBP18.68■□□□□ 0.58
SGCD-204ENST00000524347 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
SGCD-204ENST00000524347 SETBP1Q9Y6X0 1596 aa18.67■□□□□ 0.58
SGCD-204ENST00000524347 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
SGCD-204ENST00000524347 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
SGCD-204ENST00000524347 METP08581 1390 aa18.63■□□□□ 0.57
SGCD-204ENST00000524347 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
SGCD-204ENST00000524347 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
SGCD-204ENST00000524347 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
SGCD-204ENST00000524347 PPLO60437 1756 aa18.62■□□□□ 0.57
SGCD-204ENST00000524347 SETD1AO15047 1707 aaKnown RBP18.61■□□□□ 0.57
SGCD-204ENST00000524347 MED1Q15648 1581 aaPredicted RBP18.61■□□□□ 0.57
SGCD-204ENST00000524347 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
SGCD-204ENST00000524347 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
SGCD-204ENST00000524347 MSH6P52701 1360 aa18.59■□□□□ 0.57
SGCD-204ENST00000524347 NEUROD1Q13562 356 aa18.59■□□□□ 0.57
SGCD-204ENST00000524347 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
SGCD-204ENST00000524347 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
SGCD-204ENST00000524347 FAM135BQ49AJ0 1406 aa18.56■□□□□ 0.56
SGCD-204ENST00000524347 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
SGCD-204ENST00000524347 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
SGCD-204ENST00000524347 MYOM2P54296 1465 aa18.53■□□□□ 0.56
SGCD-204ENST00000524347 NALCNQ8IZF0 1738 aa18.53■□□□□ 0.56
SGCD-204ENST00000524347 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
SGCD-204ENST00000524347 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
SGCD-204ENST00000524347 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
SGCD-204ENST00000524347 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
SGCD-204ENST00000524347 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
SGCD-204ENST00000524347 VGFO15240 615 aaPredicted RBP18.5■□□□□ 0.55
SGCD-204ENST00000524347 RALGAPBQ86X10 1494 aa18.49■□□□□ 0.55
SGCD-204ENST00000524347 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
SGCD-204ENST00000524347 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
SGCD-204ENST00000524347 LAMC1P11047 1609 aa18.49■□□□□ 0.55
SGCD-204ENST00000524347 PRAG1Q86YV5 1406 aa18.49■□□□□ 0.55
SGCD-204ENST00000524347 RPGRIP1LQ68CZ1 1315 aa18.49■□□□□ 0.55
SGCD-204ENST00000524347 C19orf44Q9H6X5 657 aa18.48■□□□□ 0.55
SGCD-204ENST00000524347 ASXL1Q8IXJ9 1541 aa18.48■□□□□ 0.55
SGCD-204ENST00000524347 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
SGCD-204ENST00000524347 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
SGCD-204ENST00000524347 ATF3P18847 181 aa18.45■□□□□ 0.54
SGCD-204ENST00000524347 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
SGCD-204ENST00000524347 MST1RQ04912 1400 aa18.44■□□□□ 0.54
SGCD-204ENST00000524347 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
SGCD-204ENST00000524347 PTCH1Q13635 1447 aa18.43■□□□□ 0.54
SGCD-204ENST00000524347 PIK3C2GO75747 1445 aa18.42■□□□□ 0.54
SGCD-204ENST00000524347 DCCP43146 1447 aa18.42■□□□□ 0.54
SGCD-204ENST00000524347 SOCS7O14512 581 aa18.41■□□□□ 0.54
SGCD-204ENST00000524347 NBPF8Q3BBV2 869 aa18.41■□□□□ 0.54
SGCD-204ENST00000524347 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
SGCD-204ENST00000524347 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
SGCD-204ENST00000524347 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
SGCD-204ENST00000524347 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
SGCD-204ENST00000524347 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms