RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
CLN8-207ENST00000524258 ANKRD30BQ9BXX2 1392 aa17.74■□□□□ 0.43
CLN8-207ENST00000524258 PLEKHG1Q9ULL1 1385 aa17.74■□□□□ 0.43
CLN8-207ENST00000524258 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CLN8-207ENST00000524258 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
CLN8-207ENST00000524258 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLN8-207ENST00000524258 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
CLN8-207ENST00000524258 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
CLN8-207ENST00000524258 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
CLN8-207ENST00000524258 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
CLN8-207ENST00000524258 NEXMIFQ5QGS0 1516 aa17.7■□□□□ 0.42
CLN8-207ENST00000524258 CCDC144AA2RUR9 1427 aa17.69■□□□□ 0.42
CLN8-207ENST00000524258 TBX22Q9Y458 520 aa17.68■□□□□ 0.42
CLN8-207ENST00000524258 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
CLN8-207ENST00000524258 RPGRIP1LQ68CZ1 1315 aa17.67■□□□□ 0.42
CLN8-207ENST00000524258 KIF1BO60333 1816 aa17.66■□□□□ 0.42
CLN8-207ENST00000524258 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
CLN8-207ENST00000524258 IQSEC2Q5JU85 1478 aa17.65■□□□□ 0.42
CLN8-207ENST00000524258 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
CLN8-207ENST00000524258 CPS1P31327 1500 aa17.65■□□□□ 0.42
CLN8-207ENST00000524258 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
CLN8-207ENST00000524258 KCNA6P17658 529 aa17.64■□□□□ 0.41
CLN8-207ENST00000524258 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
CLN8-207ENST00000524258 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
CLN8-207ENST00000524258 FBXO41Q8TF61 875 aa17.63■□□□□ 0.41
CLN8-207ENST00000524258 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
CLN8-207ENST00000524258 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
CLN8-207ENST00000524258 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
CLN8-207ENST00000524258 PTPRUQ92729 1446 aa17.61■□□□□ 0.41
CLN8-207ENST00000524258 VGFO15240 615 aaPredicted RBP17.6■□□□□ 0.41
CLN8-207ENST00000524258 NWD1Q149M9 1564 aa17.6■□□□□ 0.41
CLN8-207ENST00000524258 DIP2AQ14689 1571 aa17.59■□□□□ 0.41
CLN8-207ENST00000524258 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
CLN8-207ENST00000524258 ADGRF5Q8IZF2 1346 aa17.59■□□□□ 0.41
CLN8-207ENST00000524258 PPLO60437 1756 aa17.58■□□□□ 0.41
CLN8-207ENST00000524258 METP08581 1390 aa17.58■□□□□ 0.4
CLN8-207ENST00000524258 BCANQ96GW7 911 aa17.58■□□□□ 0.4
CLN8-207ENST00000524258 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
CLN8-207ENST00000524258 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
CLN8-207ENST00000524258 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
CLN8-207ENST00000524258 ALKQ9UM73 1620 aa17.55■□□□□ 0.4
CLN8-207ENST00000524258 NKTRP30414 1462 aaKnown RBP17.55■□□□□ 0.4
CLN8-207ENST00000524258 NRXN1Q9ULB1 1477 aa17.55■□□□□ 0.4
CLN8-207ENST00000524258 TMEM94Q12767 1356 aa17.53■□□□□ 0.4
CLN8-207ENST00000524258 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
CLN8-207ENST00000524258 AMOTL2Q9Y2J4 779 aa17.53■□□□□ 0.4
CLN8-207ENST00000524258 XIRP1Q702N8 1843 aaKnown RBP17.52■□□□□ 0.4
CLN8-207ENST00000524258 PIK3C2GO75747 1445 aa17.52■□□□□ 0.4
CLN8-207ENST00000524258 MYOM2P54296 1465 aa17.51■□□□□ 0.39
CLN8-207ENST00000524258 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
CLN8-207ENST00000524258 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
CLN8-207ENST00000524258 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
CLN8-207ENST00000524258 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
CLN8-207ENST00000524258 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
CLN8-207ENST00000524258 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
CLN8-207ENST00000524258 C14orf93Q9H972 538 aaKnown RBP17.48■□□□□ 0.39
CLN8-207ENST00000524258 NCOA3Q9Y6Q9 1424 aa17.47■□□□□ 0.39
CLN8-207ENST00000524258 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
CLN8-207ENST00000524258 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
CLN8-207ENST00000524258 DCAF11Q8TEB1 546 aa17.45■□□□□ 0.38
CLN8-207ENST00000524258 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
CLN8-207ENST00000524258 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
CLN8-207ENST00000524258 CFAP70Q5T0N1 1121 aa17.44■□□□□ 0.38
CLN8-207ENST00000524258 TOM1O60784 492 aa17.43■□□□□ 0.38
CLN8-207ENST00000524258 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
CLN8-207ENST00000524258 TECPR2O15040 1411 aa17.42■□□□□ 0.38
CLN8-207ENST00000524258 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
CLN8-207ENST00000524258 KDM2AQ9Y2K7 1162 aa17.42■□□□□ 0.38
CLN8-207ENST00000524258 LRPPRCP42704 1394 aaKnown RBP17.41■□□□□ 0.38
CLN8-207ENST00000524258 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
CLN8-207ENST00000524258 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
CLN8-207ENST00000524258 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
CLN8-207ENST00000524258 C19orf44Q9H6X5 657 aa17.39■□□□□ 0.37
CLN8-207ENST00000524258 MSH6P52701 1360 aa17.38■□□□□ 0.37
CLN8-207ENST00000524258 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
CLN8-207ENST00000524258 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
CLN8-207ENST00000524258 PIP4K2BP78356 416 aa17.36■□□□□ 0.37
CLN8-207ENST00000524258 NEUROD1Q13562 356 aa17.36■□□□□ 0.37
CLN8-207ENST00000524258 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
CLN8-207ENST00000524258 ADGRL3Q9HAR2 1447 aa17.36■□□□□ 0.37
CLN8-207ENST00000524258 STK26Q9P289 416 aa17.35■□□□□ 0.37
CLN8-207ENST00000524258 PLEKHH1Q9ULM0 1364 aa17.35■□□□□ 0.37
CLN8-207ENST00000524258 DCCP43146 1447 aa17.35■□□□□ 0.37
CLN8-207ENST00000524258 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
CLN8-207ENST00000524258 LAMC1P11047 1609 aa17.34■□□□□ 0.37
CLN8-207ENST00000524258 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
CLN8-207ENST00000524258 SLAIN2Q9P270 581 aa17.34■□□□□ 0.37
CLN8-207ENST00000524258 CADPS2Q86UW7 1296 aa17.32■□□□□ 0.36
CLN8-207ENST00000524258 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
CLN8-207ENST00000524258 HSPA1LP34931 641 aa17.31■□□□□ 0.36
CLN8-207ENST00000524258 NBPF1Q3BBV0 1214 aa17.31■□□□□ 0.36
CLN8-207ENST00000524258 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
CLN8-207ENST00000524258 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
CLN8-207ENST00000524258 DLC1Q96QB1 1528 aa17.3■□□□□ 0.36
CLN8-207ENST00000524258 MST1RQ04912 1400 aa17.3■□□□□ 0.36
CLN8-207ENST00000524258 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
CLN8-207ENST00000524258 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
CLN8-207ENST00000524258 ATF3P18847 181 aa17.28■□□□□ 0.36
CLN8-207ENST00000524258 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.35
CLN8-207ENST00000524258 PRAM1Q96QH2 718 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms