RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 ZFYVE9O95405 1425 aa24.64■■□□□ 1.54
CSGALNACT1-216ENST00000524213 CLTCL1P53675 1640 aa24.63■■□□□ 1.53
CSGALNACT1-216ENST00000524213 RIMS2Q9UQ26 1411 aa24.62■■□□□ 1.53
CSGALNACT1-216ENST00000524213 TRPM2O94759 1503 aa24.62■■□□□ 1.53
CSGALNACT1-216ENST00000524213 KIF1BO60333 1816 aa24.59■■□□□ 1.53
CSGALNACT1-216ENST00000524213 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
CSGALNACT1-216ENST00000524213 MPHOSPH9Q99550 1183 aa24.59■■□□□ 1.53
CSGALNACT1-216ENST00000524213 SLC26A8Q96RN1 970 aa24.55■■□□□ 1.52
CSGALNACT1-216ENST00000524213 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
CSGALNACT1-216ENST00000524213 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
CSGALNACT1-216ENST00000524213 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
CSGALNACT1-216ENST00000524213 LRRC7Q96NW7 1537 aa24.53■■□□□ 1.52
CSGALNACT1-216ENST00000524213 HDGFP51858 240 aaKnown RBP24.53■■□□□ 1.52
CSGALNACT1-216ENST00000524213 XIRP1Q702N8 1843 aaKnown RBP24.53■■□□□ 1.52
CSGALNACT1-216ENST00000524213 NUTM2DQ5VT03 806 aaPredicted RBP24.52■■□□□ 1.52
CSGALNACT1-216ENST00000524213 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.52■■□□□ 1.52
CSGALNACT1-216ENST00000524213 BCANQ96GW7 911 aa24.52■■□□□ 1.52
CSGALNACT1-216ENST00000524213 UBAP1LF5GYI3 381 aa24.5■■□□□ 1.51
CSGALNACT1-216ENST00000524213 FOXD1Q16676 465 aa24.5■■□□□ 1.51
CSGALNACT1-216ENST00000524213 CHD2O14647 1828 aaKnown RBP24.49■■□□□ 1.51
CSGALNACT1-216ENST00000524213 NWD1Q149M9 1564 aa24.47■■□□□ 1.51
CSGALNACT1-216ENST00000524213 ZNF326Q5BKZ1 582 aaKnown RBP24.47■■□□□ 1.51
CSGALNACT1-216ENST00000524213 NEXMIFQ5QGS0 1516 aa24.46■■□□□ 1.51
CSGALNACT1-216ENST00000524213 DIP2AQ14689 1571 aa24.45■■□□□ 1.5
CSGALNACT1-216ENST00000524213 ADAMTS13Q76LX8 1427 aa24.44■■□□□ 1.5
CSGALNACT1-216ENST00000524213 NRXN3Q9Y4C0 1643 aa24.44■■□□□ 1.5
CSGALNACT1-216ENST00000524213 KCNA6P17658 529 aa24.44■■□□□ 1.5
CSGALNACT1-216ENST00000524213 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
CSGALNACT1-216ENST00000524213 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
CSGALNACT1-216ENST00000524213 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
CSGALNACT1-216ENST00000524213 PPLO60437 1756 aa24.4■■□□□ 1.5
CSGALNACT1-216ENST00000524213 SETBP1Q9Y6X0 1596 aa24.4■■□□□ 1.5
CSGALNACT1-216ENST00000524213 NKTRP30414 1462 aaKnown RBP24.39■■□□□ 1.5
CSGALNACT1-216ENST00000524213 TOM1O60784 492 aa24.38■■□□□ 1.49
CSGALNACT1-216ENST00000524213 TMEM94Q12767 1356 aa24.36■■□□□ 1.49
CSGALNACT1-216ENST00000524213 PIP4K2BP78356 416 aa24.35■■□□□ 1.49
CSGALNACT1-216ENST00000524213 PROSER2Q86WR7 435 aaPredicted RBP24.35■■□□□ 1.49
CSGALNACT1-216ENST00000524213 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
CSGALNACT1-216ENST00000524213 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
CSGALNACT1-216ENST00000524213 PIK3R4Q99570 1358 aa24.33■■□□□ 1.49
CSGALNACT1-216ENST00000524213 RPGRIP1LQ68CZ1 1315 aa24.33■■□□□ 1.48
CSGALNACT1-216ENST00000524213 IFT172Q9UG01 1749 aa24.32■■□□□ 1.48
CSGALNACT1-216ENST00000524213 ANKRD30BQ9BXX2 1392 aa24.31■■□□□ 1.48
CSGALNACT1-216ENST00000524213 SETD1AO15047 1707 aaKnown RBP24.31■■□□□ 1.48
CSGALNACT1-216ENST00000524213 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
CSGALNACT1-216ENST00000524213 XRN1Q8IZH2 1706 aaKnown RBP24.3■■□□□ 1.48
CSGALNACT1-216ENST00000524213 SPATA31E1Q6ZUB1 1445 aa24.3■■□□□ 1.48
CSGALNACT1-216ENST00000524213 VGFO15240 615 aaPredicted RBP24.27■■□□□ 1.48
CSGALNACT1-216ENST00000524213 METP08581 1390 aa24.27■■□□□ 1.48
CSGALNACT1-216ENST00000524213 RGL3Q3MIN7 710 aa24.26■■□□□ 1.47
CSGALNACT1-216ENST00000524213 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
CSGALNACT1-216ENST00000524213 MSH6P52701 1360 aa24.22■■□□□ 1.47
CSGALNACT1-216ENST00000524213 HSPA1LP34931 641 aa24.21■■□□□ 1.47
CSGALNACT1-216ENST00000524213 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
CSGALNACT1-216ENST00000524213 NCOA3Q9Y6Q9 1424 aa24.19■■□□□ 1.46
CSGALNACT1-216ENST00000524213 ADGRF5Q8IZF2 1346 aa24.19■■□□□ 1.46
CSGALNACT1-216ENST00000524213 ROBO1Q9Y6N7 1651 aa24.18■■□□□ 1.46
CSGALNACT1-216ENST00000524213 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
CSGALNACT1-216ENST00000524213 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
CSGALNACT1-216ENST00000524213 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
CSGALNACT1-216ENST00000524213 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
CSGALNACT1-216ENST00000524213 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
CSGALNACT1-216ENST00000524213 STAC3Q96MF2 364 aa24.13■■□□□ 1.45
CSGALNACT1-216ENST00000524213 PIK3C2GO75747 1445 aa24.11■■□□□ 1.45
CSGALNACT1-216ENST00000524213 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
CSGALNACT1-216ENST00000524213 MYOM2P54296 1465 aa24.1■■□□□ 1.45
CSGALNACT1-216ENST00000524213 ASXL1Q8IXJ9 1541 aa24.1■■□□□ 1.45
CSGALNACT1-216ENST00000524213 SLAIN2Q9P270 581 aa24.09■■□□□ 1.45
CSGALNACT1-216ENST00000524213 PTCH1Q13635 1447 aa24.09■■□□□ 1.45
CSGALNACT1-216ENST00000524213 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.44
CSGALNACT1-216ENST00000524213 NRXN1Q9ULB1 1477 aa24.07■■□□□ 1.44
CSGALNACT1-216ENST00000524213 ROBO2Q9HCK4 1378 aa24.07■■□□□ 1.44
CSGALNACT1-216ENST00000524213 LAMC1P11047 1609 aa24.06■■□□□ 1.44
CSGALNACT1-216ENST00000524213 ATF3P18847 181 aa24.06■■□□□ 1.44
CSGALNACT1-216ENST00000524213 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
CSGALNACT1-216ENST00000524213 KNDC1Q76NI1 1749 aa24.05■■□□□ 1.44
CSGALNACT1-216ENST00000524213 DCCP43146 1447 aa24.05■■□□□ 1.44
CSGALNACT1-216ENST00000524213 ADGRL3Q9HAR2 1447 aa24.05■■□□□ 1.44
CSGALNACT1-216ENST00000524213 DCAF11Q8TEB1 546 aa24.04■■□□□ 1.44
CSGALNACT1-216ENST00000524213 PHLPP1O60346 1717 aa24.04■■□□□ 1.44
CSGALNACT1-216ENST00000524213 TMEM132EQ6IEE7 984 aa24.02■■□□□ 1.44
CSGALNACT1-216ENST00000524213 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
CSGALNACT1-216ENST00000524213 KDM2AQ9Y2K7 1162 aa24.01■■□□□ 1.43
CSGALNACT1-216ENST00000524213 MED1Q15648 1581 aaPredicted RBP24■■□□□ 1.43
CSGALNACT1-216ENST00000524213 SIN3AQ96ST3 1273 aa24■■□□□ 1.43
CSGALNACT1-216ENST00000524213 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
CSGALNACT1-216ENST00000524213 C14orf93Q9H972 538 aaKnown RBP23.99■■□□□ 1.43
CSGALNACT1-216ENST00000524213 STK26Q9P289 416 aa23.99■■□□□ 1.43
CSGALNACT1-216ENST00000524213 TECPR2O15040 1411 aa23.99■■□□□ 1.43
CSGALNACT1-216ENST00000524213 MST1RQ04912 1400 aa23.99■■□□□ 1.43
CSGALNACT1-216ENST00000524213 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
CSGALNACT1-216ENST00000524213 CFAP70Q5T0N1 1121 aa23.98■■□□□ 1.43
CSGALNACT1-216ENST00000524213 YTHDC2Q9H6S0 1430 aaKnown RBP23.97■■□□□ 1.43
CSGALNACT1-216ENST00000524213 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.43
CSGALNACT1-216ENST00000524213 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
CSGALNACT1-216ENST00000524213 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.42
CSGALNACT1-216ENST00000524213 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
CSGALNACT1-216ENST00000524213 WAPLQ7Z5K2 1190 aa23.92■■□□□ 1.42
CSGALNACT1-216ENST00000524213 NHSL1Q5SYE7 1610 aa23.92■■□□□ 1.42
CSGALNACT1-216ENST00000524213 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms