RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 LRRC7Q96NW7 1537 aa28.74■■■□□ 2.19
FBXO28-205ENST00000523990 CHGAP10645 457 aaKnown RBP28.73■■■□□ 2.19
FBXO28-205ENST00000523990 PLEKHG1Q9ULL1 1385 aa28.72■■■□□ 2.19
FBXO28-205ENST00000523990 NWD1Q149M9 1564 aa28.71■■■□□ 2.19
FBXO28-205ENST00000523990 SLC4A1APQ9BWU0 796 aaKnown RBP28.69■■■□□ 2.18
FBXO28-205ENST00000523990 CHD2O14647 1828 aaKnown RBP28.68■■■□□ 2.18
FBXO28-205ENST00000523990 DIP2AQ14689 1571 aa28.67■■■□□ 2.18
FBXO28-205ENST00000523990 HDGFP51858 240 aaKnown RBP28.67■■■□□ 2.18
FBXO28-205ENST00000523990 UBAP1LF5GYI3 381 aa28.66■■■□□ 2.18
FBXO28-205ENST00000523990 PPP1R15AO75807 674 aaPredicted RBP28.66■■■□□ 2.18
FBXO28-205ENST00000523990 SLC26A8Q96RN1 970 aa28.66■■■□□ 2.18
FBXO28-205ENST00000523990 ALKQ9UM73 1620 aa28.66■■■□□ 2.18
FBXO28-205ENST00000523990 SETD5Q9C0A6 1442 aa28.65■■■□□ 2.18
FBXO28-205ENST00000523990 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.65■■■□□ 2.18
FBXO28-205ENST00000523990 NEXMIFQ5QGS0 1516 aa28.64■■■□□ 2.17
FBXO28-205ENST00000523990 NRXN3Q9Y4C0 1643 aa28.63■■■□□ 2.17
FBXO28-205ENST00000523990 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
FBXO28-205ENST00000523990 ADAMTS13Q76LX8 1427 aa28.61■■■□□ 2.17
FBXO28-205ENST00000523990 NUTM2DQ5VT03 806 aaPredicted RBP28.6■■■□□ 2.17
FBXO28-205ENST00000523990 BCANQ96GW7 911 aa28.6■■■□□ 2.17
FBXO28-205ENST00000523990 SETBP1Q9Y6X0 1596 aa28.6■■■□□ 2.17
FBXO28-205ENST00000523990 SENP3Q9H4L4 574 aaPredicted RBP28.59■■■□□ 2.17
FBXO28-205ENST00000523990 KCNA6P17658 529 aa28.57■■■□□ 2.16
FBXO28-205ENST00000523990 RAB3GAP2Q9H2M9 1393 aa28.57■■■□□ 2.16
FBXO28-205ENST00000523990 PPLO60437 1756 aa28.56■■■□□ 2.16
FBXO28-205ENST00000523990 ACIN1Q9UKV3 1341 aaKnown RBP28.55■■■□□ 2.16
FBXO28-205ENST00000523990 TOM1O60784 492 aa28.54■■■□□ 2.16
FBXO28-205ENST00000523990 FOXD1Q16676 465 aa28.54■■■□□ 2.16
FBXO28-205ENST00000523990 ZNF326Q5BKZ1 582 aaKnown RBP28.54■■■□□ 2.16
FBXO28-205ENST00000523990 MPHOSPH9Q99550 1183 aa28.54■■■□□ 2.16
FBXO28-205ENST00000523990 TBX22Q9Y458 520 aa28.53■■■□□ 2.16
FBXO28-205ENST00000523990 TMEM94Q12767 1356 aa28.51■■■□□ 2.15
FBXO28-205ENST00000523990 PIK3R4Q99570 1358 aa28.5■■■□□ 2.15
FBXO28-205ENST00000523990 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
FBXO28-205ENST00000523990 CCDC144AA2RUR9 1427 aa28.48■■■□□ 2.15
FBXO28-205ENST00000523990 SETD1AO15047 1707 aaKnown RBP28.48■■■□□ 2.15
FBXO28-205ENST00000523990 XRN1Q8IZH2 1706 aaKnown RBP28.48■■■□□ 2.15
FBXO28-205ENST00000523990 PIP4K2BP78356 416 aa28.46■■■□□ 2.15
FBXO28-205ENST00000523990 SCAF1Q9H7N4 1312 aaKnown RBP28.45■■■□□ 2.14
FBXO28-205ENST00000523990 PROSER2Q86WR7 435 aaPredicted RBP28.43■■■□□ 2.14
FBXO28-205ENST00000523990 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
FBXO28-205ENST00000523990 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
FBXO28-205ENST00000523990 RBM33Q96EV2 1170 aaKnown RBP28.41■■■□□ 2.14
FBXO28-205ENST00000523990 RPGRIP1LQ68CZ1 1315 aa28.39■■■□□ 2.14
FBXO28-205ENST00000523990 NCOA3Q9Y6Q9 1424 aa28.36■■■□□ 2.13
FBXO28-205ENST00000523990 METP08581 1390 aa28.36■■■□□ 2.13
FBXO28-205ENST00000523990 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
FBXO28-205ENST00000523990 MSH6P52701 1360 aa28.35■■■□□ 2.13
FBXO28-205ENST00000523990 VGFO15240 615 aaPredicted RBP28.35■■■□□ 2.13
FBXO28-205ENST00000523990 HSPA1LP34931 641 aa28.35■■■□□ 2.13
FBXO28-205ENST00000523990 ROBO1Q9Y6N7 1651 aa28.34■■■□□ 2.13
FBXO28-205ENST00000523990 HRCP23327 699 aa28.34■■■□□ 2.13
FBXO28-205ENST00000523990 AMOTL2Q9Y2J4 779 aa28.33■■■□□ 2.13
FBXO28-205ENST00000523990 FAM135BQ49AJ0 1406 aa28.28■■■□□ 2.12
FBXO28-205ENST00000523990 RGL3Q3MIN7 710 aa28.27■■■□□ 2.12
FBXO28-205ENST00000523990 NALCNQ8IZF0 1738 aa28.27■■■□□ 2.12
FBXO28-205ENST00000523990 ANKRD30BQ9BXX2 1392 aa28.27■■■□□ 2.12
FBXO28-205ENST00000523990 PRAG1Q86YV5 1406 aa28.24■■■□□ 2.11
FBXO28-205ENST00000523990 ADGRF5Q8IZF2 1346 aa28.23■■■□□ 2.11
FBXO28-205ENST00000523990 PIK3C2GO75747 1445 aa28.23■■■□□ 2.11
FBXO28-205ENST00000523990 PTCH1Q13635 1447 aa28.23■■■□□ 2.11
FBXO28-205ENST00000523990 C14orf37Q86TY3 774 aa28.21■■■□□ 2.11
FBXO28-205ENST00000523990 MYOM2P54296 1465 aa28.21■■■□□ 2.11
FBXO28-205ENST00000523990 DCCP43146 1447 aa28.2■■■□□ 2.11
FBXO28-205ENST00000523990 ASXL1Q8IXJ9 1541 aa28.19■■■□□ 2.1
FBXO28-205ENST00000523990 LAMC1P11047 1609 aa28.19■■■□□ 2.1
FBXO28-205ENST00000523990 KNDC1Q76NI1 1749 aa28.19■■■□□ 2.1
FBXO28-205ENST00000523990 C19orf44Q9H6X5 657 aa28.18■■■□□ 2.1
FBXO28-205ENST00000523990 NRXN1Q9ULB1 1477 aa28.18■■■□□ 2.1
FBXO28-205ENST00000523990 MED1Q15648 1581 aaPredicted RBP28.18■■■□□ 2.1
FBXO28-205ENST00000523990 ADGRL3Q9HAR2 1447 aa28.17■■■□□ 2.1
FBXO28-205ENST00000523990 SLAIN2Q9P270 581 aa28.17■■■□□ 2.1
FBXO28-205ENST00000523990 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
FBXO28-205ENST00000523990 DISP3Q9P2K9 1392 aa28.15■■■□□ 2.1
FBXO28-205ENST00000523990 CADPS2Q86UW7 1296 aa28.15■■■□□ 2.1
FBXO28-205ENST00000523990 ROBO2Q9HCK4 1378 aa28.14■■■□□ 2.1
FBXO28-205ENST00000523990 ATF3P18847 181 aa28.12■■■□□ 2.09
FBXO28-205ENST00000523990 TECPR2O15040 1411 aa28.1■■■□□ 2.09
FBXO28-205ENST00000523990 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
FBXO28-205ENST00000523990 MST1RQ04912 1400 aa28.09■■■□□ 2.09
FBXO28-205ENST00000523990 AHDC1Q5TGY3 1603 aaPredicted RBP28.09■■■□□ 2.09
FBXO28-205ENST00000523990 NHSL1Q5SYE7 1610 aa28.05■■■□□ 2.08
FBXO28-205ENST00000523990 LRPPRCP42704 1394 aaKnown RBP28.05■■■□□ 2.08
FBXO28-205ENST00000523990 CDC42BPGQ6DT37 1551 aa28.03■■■□□ 2.08
FBXO28-205ENST00000523990 YTHDC2Q9H6S0 1430 aaKnown RBP28.03■■■□□ 2.08
FBXO28-205ENST00000523990 TMEM132EQ6IEE7 984 aa28.01■■■□□ 2.08
FBXO28-205ENST00000523990 C14orf93Q9H972 538 aaKnown RBP28.01■■■□□ 2.08
FBXO28-205ENST00000523990 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
FBXO28-205ENST00000523990 ADGRB1O14514 1584 aa27.99■■■□□ 2.07
FBXO28-205ENST00000523990 BRINP3Q76B58 766 aa27.99■■■□□ 2.07
FBXO28-205ENST00000523990 DHX57Q6P158 1386 aaKnown RBP27.98■■■□□ 2.07
FBXO28-205ENST00000523990 CFAP70Q5T0N1 1121 aa27.98■■■□□ 2.07
FBXO28-205ENST00000523990 STK26Q9P289 416 aa27.97■■■□□ 2.07
FBXO28-205ENST00000523990 SHPRHQ149N8 1683 aa27.96■■■□□ 2.07
FBXO28-205ENST00000523990 C1orf167Q5SNV9 1468 aa27.96■■■□□ 2.07
FBXO28-205ENST00000523990 DCAF11Q8TEB1 546 aa27.95■■■□□ 2.07
FBXO28-205ENST00000523990 PLEKHH1Q9ULM0 1364 aa27.93■■■□□ 2.06
FBXO28-205ENST00000523990 FMN2Q9NZ56 1722 aa27.92■■■□□ 2.06
FBXO28-205ENST00000523990 DLC1Q96QB1 1528 aa27.92■■■□□ 2.06
FBXO28-205ENST00000523990 STAC3Q96MF2 364 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms